Micropterus salmoides (largemouth bass): 119889695
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Entry
119889695 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: stereocilin-like
KO
K24636
stereocilin
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119889695
Cilium and associated proteins [BR:
msam03037
]
Other cilia and associated proteins
Stereociliary proteins
119889695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Stereocilin
ANTAR
Motif
Other DBs
NCBI-GeneID:
119889695
NCBI-ProteinID:
XP_038556412
LinkDB
All DBs
Position
Unknown
AA seq
1962 aa
AA seq
DB search
MKMAEKGPRMATLTFTSIIVCAVLLGQGSPEKTGSGKEDQRDAILKEILSKWSTGSGWKP
QKAPPETNKDQSVHPWVRNIMGSLKTLGLLPSKNLPSLKKPIDRHRLSGFLYNISLYLQE
MGAELEEAPVEPDEGQLWEKVLHYFLQSEGSAVLNQWNGRVPPRPSVRLQDWFLSLRGSP
HWDWLLGLLQSLITLSERQLQKPLLTYLSQNWRTVSAVLEAVLQALVSGTYGQASAGLQG
FICALKGRSDCTFSVNWLQQLLRFLETRNWKPVVSLHPAGEDAEHSRGSSVFGRLKPFSL
PPEAMRQDGLSANASLEDMMAREDDPDSMQSLLLQALSRSSGGERGSYLAQKNLALVQSL
DGLRKGLLHRVGSSVYGNLRKKVSRVTMALLDDVSSLVDVPQPNAQGRCSVGDLRQLILW
GIRHNVTWNTQALGVKSHGLPSSLPFLSCPSTEGDELRSRLTPAHSSPETTSSSRIISKQ
KRLHEPSHRSQLNQPPTERTSENRNQQKEMEHSTSIEILEAACNESIPGLTGVSNFTVFL
YCKLFEGENGSVDPAVAQMGLDLHATCSDAAWYLSAAEEDFFWVHVCSEFFAHEFNNTVC
ANSSFWLQRAHQAVLTKDYQFFNQTNIDDLCVQLSGEATGSPGPDEKCLAQLGSRLLSAQ
AFRDCFLPNNSVLVSALCGRESPDLHQSLPEGSWAAAYCSKIHNFSHVDTIEETCQYRMW
AVHQFTNSTLLELCEQTPGLREYICLNATLYNQLLRLMPQFADVCADLQAEMEDRKCFLQ
RFFDMLPAPYEFDTSQLCVDPAPLLVEVLHKLSVCEVEGGEQQGFLVALGYLLRVLDFMV
GLSSGLDEGEREVRQGLGQAILLSSLLDNASWATLQPEASMSVLHTVGVFLRRERNATLK
ESLLSCFSPVLWDLIQRDDNSSALRVLLQEYLQMPRDSIRTLVMSAEKDAVKRFLSHMHQ
SWDQLQVETGQASQKELQAMETMTAAFIHKFPRVTPELFVDLSQFIPFMSVSDIMNFPAS
LIVNDSVLTAIRDHSSGMKSLQKKAFVKRLLQSSVVGDVPTWPPYFLSSILPLLPYLPVS
HFQQLTSQQLTPLVELLGNGSLDGVRGRHVLRALFNKKKNLTSDYISRLGVLACYLNPVD
LGSFLQDSAVSSALWQQLAQCMSKGFISASGRLSSWLIPAVQNLNVSSMSPTELSALSGL
LPQLGAPFLLSIPSQQLLEILSQPGLHRYSPAQAFQMLSKISKDTNFTMEKLCRLKALHT
GLSPAVLSRDLQWPEISEAAHCHCWRTLLTELKPGHRAMLYNAMQEALHRDLQNITHRVN
CLLPFVPLRKLKEIFNGETILREISLYRDMQWSPQQAQHLFKMIHNFQNITSKMVRELGH
IASGLSCDSLRLWSNDTDFVELLQFVSELPGGVRPALRKCIVDELRKQPELNLSALSAAF
AATLPVTMIENLSNASFRTILGYIQAHFADFLRLPRYKQTNLAEKVVSELGSSQAEGEID
GTTLDVLGPLLPFLDRDSLALVDRRAVALRLEEMRSFCLPKQALRDISALLTQKDLLGEP
SKWQVGDVEHLGRLVFSLSTKQINSIPLTVLNKDTVEQVLVGQSHWEDSVVGGLCLTQCM
DQRRLRQQTQSLIRGIVKARSRRAKVPVPSCADIRGTFPSAWTSTQLSRMSQEDLKQCVE
VFAQDASMSSEQRRALWLKLRQLFSPVKELRAHQVLALGSLVTEMGERELHDANLTDLGV
LAHLGTLTDWSPKKMRAVVLGVMRKRKLKVEQLAAADLATCGHLICGLYPSEIKRLSPYN
LSMAVLFLREMSLPCTEQQMEVLTSRLSRPEAFGPVSAWGPEVFTEIGTLAVGLEDMVLS
ALVQEQVEGITPEAIALMSPKQMAVAFSAVQLSWLSAEQAWAVSEEQWEELDTEQRHXVG
LARYEGDVLLELRGRNSAPATLNADCFIVRSLGLCLLFYQLI
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcagagaaagggcccaggatggccactcttacattcacaagcatcatagtt
tgtgctgtgttactgggacaaggatcccctgagaagacaggaagtggtaaagaagaccag
agagatgccattcttaaggagatcctttcaaaatggagtacaggaagtggttggaaaccc
cagaaagctcctccagaaacaaacaaggaccagtctgtgcacccttgggtgaggaatatc
atggggagccttaaaacactcggcctacttcccagcaagaacctgccttcattaaaaaag
ccaattgacaggcaccgtctctctggcttcctctacaacatctctctgtacctccaagag
atgggtgctgagctggaggaggcaccagtggagccagatgaggggcagctgtgggagaag
gtgctgcattacttcctgcagtctgaaggtagcgctgtgctgaaccagtggaacggccgg
gtgccaccccgacccagtgtcagactgcaggactggtttttgtctctgaggggcagccct
cactgggactggcttctggggctgctgcagagtttgatcactctatcagagcgtcagctc
caaaagcccctcttgacttacttatctcagaactggaggacggtgagcgctgtgctggaa
gctgtgctccaggctctggtcagtgggacttatggccaggccagcgccggcctgcagggc
ttcatctgtgctctgaagggtcgtagtgactgtaccttcagtgtgaactggcttcagcag
ctgctgcgtttccttgaaacacgcaactggaagcctgtggtcagtttacacccagcaggg
gaagatgctgaacacagtaggggctcaagtgtgtttggacgtttaaagcccttcagcttg
cctcctgaggccatgaggcaggatgggctgtctgcaaatgcatctctggaagacatgatg
gccagagaggatgatccggactccatgcagagtttactgttgcaggcgttgtcacgctca
agtggaggagagcgaggtagctacctggcacagaagaatctagctctggtgcagagtttg
gatgggctgaggaagggccttctgcacagggtgggtagttctgtctacggtaacctgaga
aaaaaagtatcacgagtaaccatggcgctgcttgatgatgtcagcagtctggtggacgtg
ccacagcccaacgctcagggccggtgctcagttggtgacctgagacaactgatcttatgg
gggataagacataatgtgacgtggaacactcaggctttgggcgttaagtcccatggtctc
ccaagctcactcccattcctgtcctgcccctccactgaaggagatgaactaagatcacga
ctaacaccagcccactcatctccagaaacaacctcctcttcacgaataatctccaagcaa
aaacggcttcatgaaccctctcaccgctcccagctcaaccagccaccaacagagagaaca
agcgagaacaggaaccagcagaaagagatggagcactccacctctatagaaatactggag
gcagcctgtaatgagtcaatcccaggcttgacaggcgtctccaacttcactgtgttcttg
tactgtaaactgtttgaaggggagaacgggtcagttgaccctgcagttgcccagatgggg
ctcgacctgcacgccacatgctctgatgcagcttggtacctgtcggctgctgaggaggat
tttttctgggttcatgtctgcagtgagttctttgcccatgaattcaacaacacggtgtgt
gccaactcctctttctggctgcagagagcacatcaggctgtactgacaaaggactaccaa
tttttcaaccagacaaacatagacgacctgtgtgtgcagctttcgggtgaggcgacagga
agtccaggacccgatgagaagtgcctggcacagttgggcagcaggttgctcagtgcccag
gctttcagagactgcttcctgcccaacaactctgtcctggtctcagctttgtgcgggaga
gagtccccggacttgcaccaatccttgccagagggcagctgggccgcagcatactgctcc
aaaatacacaacttctcccatgttgacaccatagaggagacttgtcagtacaggatgtgg
gctgtgcatcaattcaccaactccacccttctggagctctgtgagcagacacccgggctg
agagagtacatttgtctgaatgccacactctacaatcagctgttaagattgatgcctcag
tttgcagatgtctgtgctgatctgcaggcagaaatggaggacaggaagtgcttcctgcag
aggttttttgacatgctcccagcgccatatgagtttgacacatcgcagctatgtgtggac
ccagctccactgctggtggaggttctacacaagctgagtgtgtgtgaggtcgagggaggg
gagcaacagggttttttggtagcgctgggctatttactgcgagtcctggacttcatggtg
ggcctctcttcgggtctggacgaaggggaacgagaggtgagacagggtctgggtcaggcc
atcctcctctccagtctccttgataacgcctcctgggccacacttcagccagaagcctcc
atgagtgtccttcacactgtgggagtcttcctccgcagagagcggaacgccactcttaaa
gagagcctgctgagctgcttcagtcccgtcttgtgggacctcatccagcgggacgacaac
tcatctgctctcagggttctgctgcaggagtacctccagatgccaagagacagcattcgc
actctagtgatgtctgccgaaaaagacgctgtgaagagatttctctcccacatgcatcaa
agttgggaccaactacaagttgaaaccggccaggcatctcaaaaagaattgcaggctatg
gaaacaatgaccgctgctttcatccacaagttcccccgagtgaccccagaattgtttgtg
gacctttctcagttcattcccttcatgtctgtttctgacatcatgaatttcccagcctcc
ctgatagtcaatgacagcgtgttgacagcgattcgtgaccacagctcagggatgaagtca
ctgcagaaaaaggcctttgtgaaaagactcctgcagtcgagtgtggtgggggatgtcccc
acgtggccaccatactttctcagttccatcctcccgcttctgccttacctcccagtcagt
cattttcagcaactgacatcacaacagcttactcctctggtagagttgctaggcaacggc
agtctggatggtgtaaggggacgccatgtgctccgggcgctcttcaacaagaagaagaat
ctgaccagtgattacatatctaggttaggagtccttgcatgttacttgaaccccgtggat
ctgggttcatttcttcaggactcagctgtgtcctcagctctctggcagcagctggctcag
tgcatgtccaagggtttcatcagtgccagcggcaggctgtcctcttggttgataccagct
gttcagaacctgaacgtcagcagcatgtctcccacagagctgtctgccctcagtggtctg
ttacctcagttaggagctcccttcctgctgtcaatcccctcacaacaactcctcgaaatc
ctctcacaaccaggattacacagatattccccagcacaggcttttcaaatgttatccaag
atttccaaggacaccaatttcaccatggaaaaactgtgcagactgaaggcattacacact
ggtctctcccctgctgtactaagcagagacctccagtggcctgagatcagtgaagctgcc
cattgccactgctggagaacgctgctaactgaacttaagcctggccatagagccatgcta
tacaatgcaatgcaggaggctttacacagagacttgcagaacatcactcatcgggtaaac
tgtctattaccatttgtccctctgaggaagctgaaggaaatcttcaatggagaaacaatc
ctgagagaaatcagcctgtacagagacatgcagtggtcaccacagcaggctcagcattta
ttcaaaatgatccataattttcaaaacattaccagcaagatggtgagggagctgggccat
atagccagtggattgagttgtgacagtttgaggctttggagcaacgatacagattttgta
gagctgcttcagtttgttagcgagctgcctggaggcgtgagacctgctctgcgcaaatgt
atcgtagacgagctgaggaaacaacctgaactcaacctcagtgctttgagtgctgcattt
gctgcaacattacctgtgacgatgatagagaacctctctaatgcatccttcagaaccatt
ctgggctacattcaggcacactttgctgatttcctcaggctgccacgttacaagcagacg
aatttagccgagaaagttgtctctgagctgggctcttctcaggccgagggagagattgat
ggcaccactctggatgtcctggggcctttactgcctttcttggaccgggacagtttggct
ctggtggacagaagagctgtggctctgcggctggaggagatgagaagtttctgccttcct
aaacaggctctgagagatattagtgccctgctcactcagaaagacctgcttggggagcca
tcaaaatggcaagttggggatgtcgaacatttgggcaggctggtgttttctctctcaaca
aagcagattaactccatcccgctgacagtgttgaataaagacacagtggagcaggtcctg
gtgggtcaaagtcactgggaagacagtgtggtgggtggactctgtctgactcagtgtatg
gaccagcgtcgtctgaggcagcagactcagagtctcattcgagggattgtcaaagcacga
agcaggagggcaaaagtgccagtaccaagctgtgcagacatcagagggacgtttccttca
gcttggacgtccactcagctcagccgaatgtcacaggaggatctgaaacagtgtgtagaa
gtttttgctcaggacgcttcaatgagctctgagcagcgccgagcattatggttgaaactc
aggcagttatttagtccggtgaaagagctgagagcacatcaggtgctggctctgggctca
ctggtgactgagatgggggaaagagagctgcacgacgccaatctcaccgatctgggtgtg
ttggcacatctggggacgctgacggactggagccctaaaaagatgagagcagtggtttta
ggtgtgatgcggaaacgcaaactgaaagtggagcagttagcagctgctgatctggcaaca
tgtggccatctgatctgtggtctgtatccctcagagatcaaaagactgagcccgtacaac
ctcagtatggctgtcctgttcctgcgggagatgtccctgccatgcacagaacagcagatg
gaggtgttgacaagccgtttatccagacctgaggcctttggtccagtcagcgcctgggga
ccagaagttttcactgaaattgggacattggcagtgggcctggaggacatggtgctgtca
gctctggtacaagaacaagtggagggaatcacccctgaagccatcgcactgatgtcacca
aaacaaatggcagtggcattcagtgcagtgcagttgtcgtggctgagcgctgagcaggcg
tgggctgtgtccgaggagcagtgggaagagctggacaccgagcagagacacngcgtcgga
ctggctcgatacgaaggagacgtcctgctggagctgagagggagaaactcggctccagca
accctgaacgcagactgcttcattgtacgctcactgggtctgtgcctcttgttttatcaa
ctaatttaa
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integrated database retrieval system
