Micropterus salmoides (largemouth bass): 119895271 Help Entry 119895271         CDS       T07309                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism msam  Micropterus salmoides (largemouth bass) Brite KEGG Orthology (KO) [BR:msam00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:msam04515]     119895271 (dchs1b) Cell adhesion molecules [BR:msam04515]  Cadherins   Cadherin related    119895271 (dchs1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_3 RET_CLD1 Cadherin_4 CADH_Y-type_LIR TMEM154 MazE_antitoxin Orf78 Cadherin_C_2 Motif Other DBs NCBI-GeneID:  119895271 NCBI-ProteinID:  XP_038564182 LinkDB All DBs Position Unknown AA seq 3304 aa AA seqDB search MPITSKGSRRRAWVSGPSVYSSLWLRKPLFYFCIVLVLVQSTTVLGALELQLDEEQPEGT IVGDINAGLPPGETASLYFISDLEGTGVGSDLNIDETTGIITTARRLDREQRDHYSFIAV TMTGVTIAVSITVNDINDHAPVFPKKKVVLKIPEHTAVGTRFSLEPATDADKEQLTTQGY AIREGNVGQAFRLETKRAANKVLYLDLVVNGLLDREKRSSYTLVLEAFDGGSPRGMGSMT LEVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQSD PERYFVMDTKSGVITLNRPLDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSI IYLIYVDQDLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQT IPEVVYPGSFVLQVTARDKDQGPNGDVRYSLLKGKNSHSDWFSIDPVTGIITTVTALDFE SEPAPSVTVVAMDSGRPPLSSTAKVDIVLQDVNDNTPVFSSNLYNASIKENTPAGTCFLE VSATDEDRGSFGAISYTLGSGSGSAVPTHFTIDKETGQLCTRTALDRDEGLDKFDLTVTA TDGGGLSSVARVRVSVVDINDNRPTFYPVLYTVSLSTHSAPGTSVVKVTANDPDSGENGR VTYRTVPGGASAFFTLNKDTGVISLSRSLHGKANTIISMVISAEDGGGLMAPVNARVNVS VVGGSVASPVFEQAQYFFTVPEDVLRGTAVGVVRASAKTGNSKDIFYSISSGDPDGYFTV DTASGTIRTALPLDHETCSSLDLEIQARSGSPPAFGTSRVRITISDVNDNSPTFLPSSSE SLLIPEITKMGTVIYTIQATDKDSGHNGQLSFDLVSAGAAGSSGQRTFGVDRSSGEVRLI GSLSYESVPRYDLQVVAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENTPL NTRFLQVRALNREASGNGGSSSSSSSSVSYRLRPDGDAALFGIIPDSGWLFVRSSLDREV KDMYLLTVLATSGLGGVGRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLLAGTGFGR VSATDRDAGLNARLTYRLLHTDRHFQINSQTGEISTRLALDREHQSSYQLVVVVQDGGTP PRSATGTAHITVLDENDHAPSFTYARPDRELLLQVMEGLPSGTVIGTVTAKDPDEGENGT VYYSLSGPRAERFSFNPTSGELRTASPLRWAERAEYTFTVTAADHGTPGLSSTCQLKIQV LSSSRSNPKPNILSMTLNTIEGAAPGSIIGSVRPHDQPESALLEGQVTYLVVGGTDRDGT FMVDRLKGDIYLVRELDYEMGSRYTLHIEVSDFSQAFPSSHLVQLDINVQDSNDHAPQFT EDPITIVIPENMEPGASIYTFQALDQDGSGPNSELRYSIEHYWPDTPDLLTLDPSTGVLT LGQKLDREATLSLYLVVRATDQAADPSQRRWGSVTARMFVTDENDNAPVFSSPSAVSVME DQPVGFVILYVMARDEDEGENGRVSYRIQAGNSPGRFSLNPNTGSLSILKAIDREEQEVF NLTIVAEDHGIPQLSTTQVLCVQVIDVNDEAPVFQRAEFETQVMENQGPGTTVLVVTATD RDQGSNGQVTYGGVTEEGFIINPVTGVITTTKELDTELQDHYTLTVYARDGGLPPNFAKA VVRVEVQDMNDNAPVFANPWYGLDVPENQGPVELCFLKATDPDSGPGGELEYSITAGDPD GDFHLHASTGALSTSRSLDRETRAEYTLEVVAKDRGSPALSTTVTVKVKVLDVNDNSPVF SRSSYSVEVSEDAAEGFQVLEVSAIDADDDLNGKVLYFLSREAHGAFTVDENTGAITTSA PLDREKWASYSFQVFAADLSPAAPKNTSAQVTVTVLDVNDNTPFFIQDPLVIVVSSKHSQ RVLATMKAEDKDFGANGSVFYRFSMPVKGFSINSLTGEIQATEPLGDLTQAQRTLIVEAM DQGSPAQSAQGVVVIYVKEVEYSGIRFSRNARDVSIQENAVTGTTVAQAQAQFPDGTRKG ISYSLFSGNRMEAFTISSSTGEIRVQSSKGLDFEDTPRLRLVVKAETVSSTSFMAINLIL QDVNDNLPRFQLQNYVAYMREAEGYEKPIIQVMAEDVDQGQNGQVTYSIQSSGMSGLFKI DPMTGSITTAAIMDREIFTQTKLVVTATDRGSPRLAGSATLTVIIVDQNDNSPTIPLPKE VRIPENMLIGTEITLVTGNDVDSSPALSYSLKLDPTALGKFGIHRYSGGVSLTAPLDFEE KTWYTLTVRATDSQHQTEANITILVEDINDNSPAFTHDLYQVTLPEHTPPGCAVVTVTAT DRDSGENGKITYRVMSSTQEGFYIDPNNGTLFIIHRAEFYPERPSVSIVIEARDGGSPSL SSLTTVQVQISDVNDNAPVFHQSEYRATVSEDTIPGSTVLTFEAFDSDLSRDNCGFDFAI ANGNEGNAFQIESSVRFLEGRGFQTVGTLLLAEGLDFETKPLYNLTVVVSDRGVPQRSSS VAAVITIGDVNDNPPVFSRAEYTVSMSEGAAAGTEIIRLTATDPDSTPNAEVQYTISSGD EVNLFTMDQWTGALRLQRTLDREHQSTHIVIIQATDGQGHFALAPVIVEVKDVNDNHPFF PVEVLTASIRENQPAHSVVTVLHAIDHDTGVFGQLKYYMVERSGAGKDSFAVDQNSGEIR SKNPFDFEKINSFNFVAVAVDSGNHSATVTVQVFVTGEDEYDPLFTSSDFSFEVPEGAKK GQSIGQVQANDEDGGVDGIVLYSLPTSSPYFDVNKTTGVIFLKLDGSGSSSSSGSGRSKR ETRLMTLDVRAHSPLDASRTTTAQVSIDVTNTNFGLAADVNILLISIIAVSLGFIILLVV MAVVFFLVKSRKRKKAQDAGNRTVASGTALQKLDDCNSGPGGERIYHQTLPGYAGDQGGA GGGPYTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQ QDADQLSDISCEPAALEGSTWFKGKKLGGSLSGTLLSGQLPVYRDEGGGYLGVGRGLNIS LPKDYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKD ETAQQSQNPRQPFQPKHKLDPKPRIDPPPLITSVAHPGAMSVPPKVPVIGRTFPHLASLR RSPISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVNQGPSASMISTREPSLDQSPDH EMRI NT seq 9915 nt NT seq  +upstreamnt  +downstreamnt atgccgataacaagtaaagggtcaagacggagggcttgggtcagtggaccctctgtgtat tcaagtctctggctgcggaagccactcttttatttttgcattgtccttgttcttgttcag tctacaactgtccttggagcactggaactccagctggatgaagagcagccggaagggacc attgttggtgacatcaatgctgggttaccacctggtgaaactgcaagtctttacttcatc tcggaccttgagggcacaggtgttggcagtgatctcaacatcgacgaaaccacgggcatc attaccactgcacgccgtctggaccgtgagcagagggaccactacagttttatcgctgtg acaatgacgggagtcactattgcggtatccatcactgtcaacgacatcaatgaccatgca cctgtgttccccaaaaagaaagttgttcttaaaatccccgagcatacagcagtggggaca aggttttccctggagccagcaacagatgcagacaaggaacagctgacaactcaaggctac gctattcgagagggcaatgtaggccaggcgttcagactggagaccaagagagctgctaac aaggtgctgtatttagacctggtggtcaatggactactggacagggagaaacgctcatcg tacaccctggtcctggaggccttcgatgggggctcacccagagggatgggatccatgacc ctggaagtgactgtgaccgacatcaacgatcatgctccggtcttcaatcagagcagatac cacgctattatctctgaaagtctcccacaaggcagtagcatcctacaggtgtttgcaaca gatgaggatgagggtgataatggtctggtcctttatgaaatcaatcggcgtcagagtgac cctgagcgctactttgtcatggatacaaagtctggggtcatcactctgaacaggcccctg gattatgaactgaagagggtccatgaactggtggtccaggccagggacaatgccagccat cctgaggtgaccaatgcatttgtgacaattcatgtacgtgactacaatgacaaccaaccc accatgaccatcatcttcctgagtgaagatggctctccgaggatctccgaaggggcacaa ccaggccagtacgtagctcggatatctgtcactgacccagactatggagagtatgccaat gtgaatgtgtccctagaggggggtgatgggaagtttgctcttacaaccaaggacagcatc atctacctaatatatgttgaccaggacttggaccgagaagaacgggattcgtatgacctc agggttatggccaccgactccggcacgccacccctcagggcagagtcatctttcaccatt caggtgactgatgtcaatgacaacccccctctgtttgaccagcaggcctaccgacagact attcctgaggttgtctatcctggctcctttgttctccaggttactgccagggacaaggac cagggccccaatggggacgtccgatatagcctcctcaagggcaaaaactctcactctgat tggttttccatcgacccggtcacggggatcattaccacagtgacagctctggatttcgaa tcagagccggcacctagtgtgactgttgttgcgatggatagcggccgtccaccactgtca tccacagcgaaagtggacattgtactgcaggatgttaacgataacacacctgtgttctcc agcaacctctacaatgcctccatcaaggagaacaccccagctgggacctgcttcttagag gtgtcagccacagatgaggatcgtggttcctttggtgctatatcctacaccctgggttct ggctctggaagcgcagtaccaacccactttaccatagacaaggagactggccagctttgc acccgcacagctctagaccgggatgagggactggacaagtttgacttgacagtcactgca acggatggcggtggtttgagctcagtagcccgtgtacgggtctccgtggtagacatcaat gataaccggcccaccttctatccagtcctctacacagttagcctcagcacccatagtgcc cctggaacctccgtcgtcaaggtaacagcaaatgaccctgattctggggaaaatggcagg gtgacctaccgcactgtacctggaggagcctctgctttcttcactctcaacaaggacaca ggtgtgatttctctctcccgctcactccatggcaaagccaacacaataatatccatggtg atatcagccgaggacgggggtggtctgatggcgccggtcaatgccagggtaaatgtgagt gtggtgggaggctcagtggcatctcccgtgtttgaacaggcccagtattttttcactgtt cccgaggacgttctcagggggacagcggtgggagtggtccgtgcttctgcaaagacaggt aattctaaggatatcttctactcaatctcctctggagatcctgatggttacttcacagtg gacactgcctctggtaccattcgcactgcccttcctcttgatcatgaaacctgctcgagt cttgacctggagatccaggcacgctctggctctcctccagcgtttggaaccagccgagta cgaataaccatttcagatgtcaatgacaattcccccaccttcctcccctcctcatcagag tccctccttatacctgagatcaccaaaatggggactgttatctacacaattcaggccacc gacaaggactctggtcataacggtcagctcagcttcgacttggtgtctgctggggctgca ggcagcagtggacaaaggacgtttggtgtcgaccgtagtagcggggaagttcgtctgatt gggagtctgtcatacgagagtgtcccacgctatgaccttcaggtggttgctaaggatggt ggagcacctcaacttagctccacctttacccttgtggtccacatccaagcgcaagatgca caaggccccaactttgacacccttacctaccgcgtggagctacgggaaaacacacctctc aacacacgtttcctccaggttcgagcgctcaacagagaggcctctgggaatggtggaagc tcctcctcatcttcctcctctgtttcctatcgccttaggcctgatggtgacgctgccctg tttgggatcataccagatagtgggtggctgtttgttcgtagctctctggaccgagaggtc aaagacatgtacttgttgaccgtcctggccacttcaggcctaggaggggtggggagaact ggcagtgccacagtcagggtgacggtaactgacgaaaatgacaattctccaagactgagc caggagagggtgtttctggcggtcagagagaacctgctagcagggacgggctttggcagg gtgtctgcaacggacagagatgcaggactaaatgctcgactcacctacaggctgctgcac actgacaggcactttcagatcaactcacaaacaggtgaaatcagcacccgcctcgccctg gacagagagcatcagtccagctaccagcttgttgtggtcgtacaggacgggggtacgcct cctcgcagcgcaactggcaccgctcatatcactgtgctggatgaaaacgaccacgctccc agttttacttatgccagacctgacagggagctgctccttcaggtgatggagggacttcca tctggaacagtcatagggacagtgacagctaaagacccagacgagggagagaacgggacc gtatactactctttatcaggccccagagcagagcgtttctcctttaatccaaccagtggt gagctgagaaccgcttctcccctgagatgggcggagcgtgcagagtacaccttcactgtg actgctgctgatcacggcacaccgggcctcagctccacctgccagctaaagatacaggtt ctcagctcttccagatccaaccccaagcccaacatactctccatgaccctgaacacaatc gaaggggctgctccgggctccatcattggctctgtccgcccacatgaccagccggaatct gctttattggaaggccaggtgacctacctggtggtgggggggacagaccgagatgggact ttcatggtggaccgtttaaagggcgacatctacctggtacgcgagctggattatgagatg gggtcgaggtacacgctgcacatcgaggtgtctgacttctcccaggcgtttcccagcagc catctggtgcagctggatatcaacgtgcaggacagcaatgaccatgctccccagttcaca gaagaccccattaccattgtgatcccagagaacatggagcctggggcttccatatatacc ttccaggctttggatcaggatggcagtggacccaacagtgagctacgttactccattgag cactactggccagacacgcctgacctcttgaccctcgacccctccaccggagtcctgacc ctgggacagaagttagatcgtgaggcaacactgtccctctacctcgtggtgcgggccaca gaccaggcagcagatccttctcagaggcgctggggttcggtcactgcccgaatgtttgtg acagatgaaaacgacaacgctccggtcttcagctctccgtctgcagtcagcgtcatggag gatcagcctgtaggatttgtcattttgtacgtgatggcaagagatgaagatgaaggagaa aatggcagagtgtcctacagaatccaggcaggcaacagccctggtcgcttcagtctcaac cccaacactggctctctctccattcttaaagcaatagaccgggaagagcaggaagtcttc aatctgaccattgtagcagaggatcatgggatacctcagctttctaccacacaggtgctg tgtgtgcaggtgattgatgtgaacgatgaagctccggtgttccagcgagcagagtttgag acccaggtgatggaaaaccaaggaccaggaaccacagtgttggttgttaccgccactgac cgggaccaaggttctaatggccaagtaacatatggaggtgtgacagaggaaggcttcatc atcaaccccgtgacaggagtcatcaccaccaccaaggaactggacacagagctacaggac cactacacactcactgtgtatgccagggatggagggctgcctcctaactttgctaaggct gtagtccgggtggaggtgcaggatatgaacgacaatgctccagtgtttgcaaacccatgg tacggactggatgtgccggagaaccagggtcctgtagagctttgctttctcaaggccaca gaccctgactcaggtcctggtggagagctggagtacagcatcactgctggggaccctgat ggagatttccacctccatgccagcacaggagctctgtccacctcacgtagcctagacagg gagacgagggctgaatatactctggaggtggtggccaaggaccgaggcagccctgctctc agcactactgtcacagttaaagtgaaagtgctggatgtcaatgacaacagccctgtcttc agcagaagtagctactctgtggaagtgtctgaggatgctgcagagggattccaagttctg gaggtgtcagccatagatgctgatgatgacctgaatgggaaggttctgtatttccttagc cgagaggcacatggagcattcactgtggatgagaacactggtgcaatcaccacatcagca cctctggaccgggagaaatgggcgtcatacagcttccaggtgtttgctgctgacctttca cctgctgcacccaagaacacctctgctcaggtgacagtcaccgtcctagatgtcaacgac aacactcccttcttcatccaggatcccctggtcattgtagtgtccagcaagcattcccag cgggttctagccaccatgaaggcagaggacaaggactttggagccaatggttctgtgttt taccgtttttccatgccagtgaagggctttagtatcaactccttgactggtgagatccag gccaccgagccactgggggatctgacccaggctcagaggacactgattgtggaggcaatg gaccagggcagtccagcccaatctgcacagggagtggtggtgatttacgtgaaggaggtg gagtacagtggcattcgcttctctaggaatgccagagacgtcagcatacaggagaatgct gtaacaggcacaactgtggctcaggctcaggctcaattcccagatggcacgcgtaagggt atcagctacagcctcttcagtgggaacagaatggaggccttcaccatcagctcctcaaca ggtgaaatcagggtgcagagctccaaggggttggactttgaagacacccccagactccgt ctagttgtgaaggctgaaactgtgtcctccacatctttcatggctatcaacttgatcctg caggatgtcaatgacaacctccctcgcttccagttgcagaattatgtcgcctacatgaga gaagcagagggatatgaaaagccaatcatacaggtgatggctgaggatgtagatcagggc caaaatggtcaggtcacctactccatccagtcatcaggcatgagcggcctgttcaagata gacccaatgacaggaagcatcaccacagcagccatcatggaccgtgaaatatttacccag accaagttagtagttacagcaacagatagaggaagtccacgattggctggttccgccaca ttgacagtgatcattgttgaccagaatgacaacagccccactattcccttacctaaggaa gtccgcatcccagagaatatgttgattggcacagagatcactctggtgacgggtaatgat gttgactccagtcctgccctctcctactccttgaagctggacccaacagccttagggaag tttgggatccaccgctacagtggaggtgtatcactcactgcgcctctggacttcgaggag aagacgtggtacaccctgacagtcagagccacagacagccagcaccaaactgaggctaac attacaatactggtggaggatattaatgacaattcacctgcatttacccatgatctctat caggtaactctgcctgagcacacgccgccaggatgtgcagttgtcacagtaacagcaact gacagggactctggagagaatggaaagatcacctacagagtgatgtcatcaacccaggag ggtttctacattgaccccaacaatggaaccctgttcatcattcacagagctgaattttac cctgaacgtccatcagtaagtattgttattgaagctcgtgatgggggctcgccttcactc tcttccctcaccactgtccaggtccaaatctctgacgtcaatgacaatgctcctgtgttt caccaatcggagtacagggctactgtttctgaggataccatccctgggtcaacagttttg acttttgaggcctttgacagtgacctctctcgtgacaactgtggctttgactttgctatt gcaaatgggaatgaaggaaatgcattccagattgaaagcagtgtgcggttcctggagggg cggggttttcagacagttgggactctgctgttggctgaggggcttgactttgaaaccaag ccactttacaacctcactgtggtggtgtcagatcgtggtgtgccccagaggagctctagt gtagcagcggtgataaccattggtgatgtgaatgataaccctccagtgttcagcagagca gaatacactgtgtcaatgagtgagggagctgccgctgggactgagatcatacgactgact gctacagacccagactcaactcccaatgctgaggtccagtatactatcagctctggggat gaggtgaacttatttaccatggaccagtggactggagccttgcggcttcagcgaacactt gaccgtgagcaccagtccacacatattgtcatcatccaggccacagatggacagggtcac ttcgcgctagctccagtcattgttgaggtcaaagatgtaaatgacaatcatccgttcttc cctgtggaagtcctgacagctagtatcagagaaaaccaaccagcacactcagttgtgacg gttctgcatgccatagaccatgacacaggggtttttggccaactaaagtactacatggtg gagcggtctggggctggaaaagacagctttgctgtggaccagaactcaggagagatcaga agcaaaaatccctttgactttgagaagatcaactcctttaactttgtagcagtagcagta gattcaggcaaccactcagccactgtaactgtacaggtgtttgtcacaggcgaggatgag tatgacccactcttcacatcctctgatttctcttttgaagtcccagagggagctaagaaa ggccagagcattggccaggtccaggcaaatgatgaggatggaggggtggatggtattgtt ctctattctcttcccaccagctctccatactttgatgtaaacaaaaccactggggtgatt tttctgaagctggatggttcaggcagcagtagtagcagcggctcgggccggagcaaacgg gaaaccaggctgatgaccctggatgtgagagctcacagtcctctagatgcatcacgcact actacagcccaggtctccatcgatgtcacaaacaccaactttggtctggctgccgatgtc aacatcctgctgataagcattattgccgtgtcccttggttttatcatattgcttgtggtc atggctgtggtgtttttccttgtcaagtcacgaaagaggaagaaagcccaggatgcagga aacagaactgttgcctcaggaacggctctgcagaaattggatgattgcaactcaggacca ggaggggagaggatctaccaccagacattgccaggctatgctggagatcagggcggggct ggtggtggtccctacactaggggtggctctctggatccttcccactccagtgggaggggg tcagctgaggcagcggaggatgacgagatcaggatgataaacgagtacccccgcgtcgcc tccatcacctcatccatgcaggagcacatctcagccagaggaccagactctggaattcag caggacgctgatcagctctctgatatctcctgtgagcctgcagctttggagggcagcacc tggttcaaaggaaagaaacttggaggtagtctcagtgggactttgctctctggccagctg ccagtctatagggatgagggaggtgggtacctcggagtaggccgcggtctcaacatttcc ctccccaaggattacgccttccctgaggatggtaaaccttcagtggatgggtccctcaca gctatcgttgccagtgatgaggagctccgtggaagctataactgggattacctgctgaac tggtgccctcaattccagcctctggcaaatgtcttcacagagattgcgagactgaaagac gaaactgcccagcagagccagaaccctcggcaacccttccagcccaagcacaaattggat cccaaacctagaattgaccctccaccactcatcacatcagtggcccacccaggggccatg tcagttccccccaaggtccctgtgattggacggactttcccccacttggcctcactccgc aggtcccctatcagtcatgagggatccatctcatcagcagcaatgtcccccagcttctct ccttctctgtcccctctggcagctcgatctccagctgtttctccctttggagtcaatcaa gggccctcagcatccatgatcagcaccagggagccctcactggaccagagtcctgatcac gagatgagaatatga

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