Micropterus salmoides (largemouth bass): 119897411
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Entry
119897411 CDS
T07309
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119897411 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119897411 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119897411 (usp5)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119897411 (usp5)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119897411 (usp5)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119897411 (usp5)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119897411 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
119897411
NCBI-ProteinID:
XP_038567023
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MADVGEILMSVLSTIRVPKPGDRVHKDECALSFSSPESEGGLYVCMNSFLGFGSRYVDRH
HARSGQRAYFHITRTRKAKKEDDNNSGSGHPPKKKPTRLAIGIEGGFDVEQEQYEEDVKV
VILPDRQEVTSEDLATMPDVVRERVSLSMAGIMAADSVSHTLQVQQWDGEVRQESRHAAD
LKQLDNGVKIPPSGWRCDVCDLQENIWMNLTDGKVLCGRRYFDGSGGNNHALLHFQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLAHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLRPLFGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQNKYVSNIDKII
DEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGDENGASEPRGDQIGIAPQMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGSNPSEAFRFLVEERIVCQQSQKAKYTQR
VDYIVQLPVQMDQATNTEELQEAERRREEGDSSAPTVRAQIPFTACMAALSEPEILTDFW
SSAVQTKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSALRATG
QQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQLCEMGF
PLEACRKAVYYTGNTGIDSSMNWIMSHMDDPDFAAPLVLPGCSSGPGTTPTESLSEEHLA
TIVSMGFSRDQATKALRATSNVLDRAVDWIFSHLDDLDSMDVSEGGRSAAESEGGRDPPP
GPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYL
YFYRRVAE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttggtgagattttgatgtcggttttgtccacaattcgggttccgaagccc
ggggaccgtgtccacaaagacgaatgcgccttgtcattttcctcgccggagagcgaagga
ggtctgtatgtgtgcatgaacagtttcttgggctttgggagtcggtatgtggacaggcac
catgctcggtctggccagagggcttacttccacatcacccggactcgcaaagctaagaag
gaagacgacaataactctggatccggacacccgcctaagaaaaagcccaccagattggct
atagggattgaaggtggttttgatgtggagcaggagcagtatgaggaggatgtaaaggtg
gtcattttacctgacagacaggaagtgacatcagaggaccttgctaccatgcctgatgtt
gtgagagagcgggtgtccctgtcaatggcgggtatcatggcagctgactcagtgtctcat
accttacaagttcagcagtgggatggagaggtgagacaggagtcaaggcatgccgctgac
cttaaacagcttgacaacggagttaagatccctcccagtggctggcgctgtgatgtgtgt
gacctccaggagaatatttggatgaacctgacggacggcaaagtgctgtgtggtcgcagg
tattttgatggctccgggggaaacaaccatgcccttctccacttccaggagacaggatac
ccactggctgtcaaacttggtaccatcactcctgatggagcagatgtgtattcctatgat
gaggatgacatggtgctggattccaagttacctgagcacctagctcactttggcattgac
atgatgaccatggaaaagactgagaggacgatgacagagctggagattgctgtgaaccag
cgtgtgggggagtgggaggtgatccaggaatctgggaccaccctacggcccctatttggc
cctggtttgactggcatgaagaacctgggcaacagctgctacctcaactctgtcatgcaa
gttctcttcaccgttccagacttccagaacaagtacgtgtctaacatcgacaagatcatt
gatgaagccccaagcgaccccacccaggacttcaaaacccaagtagccaagctcggctac
ggtctgttgtcgggagagtattccaaaccagcaccagaccctggagatgaaaatggtgca
tctgaacccagaggagaccaaatcggcatagcaccacaaatgttcaaagcacttgttggg
cgtggccacccagagttctccaccaatagacaacaggatgctcaggagtttttattgcac
ttcataaacatggtggagaggaactgtcgctctgggtccaacccatctgaagccttcagg
ttcctggtggaggagaggattgtgtgtcagcaatcacagaaagccaagtacacacagcgg
gtggattacatcgtccagctgcctgtgcagatggaccaggcgacaaacacagaagagctt
caggaggcggagcgccggcgtgaggagggggactcatcagcccctactgtgcgtgcacaa
atccccttcacagcttgcatggcagccctcagcgaaccagagatccttacagacttctgg
agctcagctgtccagaccaagactactgctaccaaaacgacccgctttgcctctttccct
gaccacctggtcatacagataaagaagttcacctttggccttgactgggttccaaagaaa
ctggacgtgagcatcgacgttcctgatacactcgacctgagcgcgttgcgtgcaactggc
cagcaaccgggggaagagcttctaccagaggtggccccgcccccactcatgaccccagat
gtggaggttaaaggtatcctgggttcccatggcaacgaggaggacgactcactctactcc
ccactgctgtctccagtccttgatgactccactgtgtcccagttatgtgagatgggattc
cctctggaggcctgcaggaaagcggtgtactacactgggaacactggcattgactcttcc
atgaattggatcatgagccacatggatgacccagacttcgcggcccccctggtattgcca
ggctgcagctctggcccagggaccacgcccacagagagcctctctgaggagcacctggca
accatagtctccatgggcttcagcagagaccaggcaaccaaagcacttcgagccacgagt
aatgtcctcgaccgggcagtggactggatcttctcccacctggatgacctagactccatg
gatgtgtctgaaggcggtcgctcagccgcagagagcgaggggggcagggatccgccgcct
gggcctcgtgtcagagatggaccaggcaagtatgagctgtttgcattcatcagtcacatg
gggacgagcacgatgtgcggccactacgtctgtcacatcaagaaggatcagcagtgggtc
atcttcaatgatcagaaggtgtgtgcttcagaaaaacctcccaaggacctgggatacctc
tatttctaccggagagtggctgaatga
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integrated database retrieval system
