Micropterus salmoides (largemouth bass): 119902725
Help
Entry
119902725 CDS
T07309
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119902725 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119902725 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
Death
DUF6061
Sec63
Motif
Other DBs
NCBI-GeneID:
119902725
NCBI-ProteinID:
XP_038575001
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MRFLIRALVACSWVAAVCVRAAMDECTDEEGRPQRCMPEFVNAAFNVTVVATNTCGSPPE
EYCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSIN
LTLHLGKSFDITYVRLKFHTSRPESFAIYKRTGEGGPWVPYQYYSGSCEKTYQKPSSGFI
RTGEDEQQAHCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLN
RLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECLKNSRGRLVCNCKHDTDGD
DCNVCKPFYNDRPWRRATADNANECLPCDCNGKSSECYFDAELYRATGHGGHCRGCADNT
DGPNCERCLDNYYREQSGGRCLPCGCSIVGSESPQCDNRGVCACKPGVSGEKCDRCQPGF
HSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDHVEGFSCDRCKLGYFNLDPNNLQGCTP
CFCFQHSSVCDSAEGFSVHTISSSFQRGDEHWTGQQRDGSSVSVQWSNSGHEISLISDDY
FPMYFVAPEKFLGNQMLSYGQNLSLNFRVDRRDTRLSAEDLVLEGANLRVAVPLIAQGNA
YPNENMQTYVFRLHDSTDYPWRPTISHSNFQKLLHNLTAIKIRGTYSERSAGYLDDFSLV
SARRGPGIPARWVEQCTCPQGYQGQHCEHCTLGYRRARPELGAFSPCEACNCNGHSDACN
PETGSCDCQDNTAGLSCERCKDGFYGDATRGTSGDCQPCPCPAGATCAVILKTREVVCTN
CPTGTTGKRCELCDDGFFGDPLGQSGAVRACRACKCSDNIDPNAVGNCNRETGECLKCIY
NTNGFFCDRCKEGFYGNALAANPADKCKPCSCSPLGTVGRQTTCSQVTGQCQCLPNVAER
DCSACQPGFFNLRSGAGCERCNCNPIGSTNGQCDITSGQCECQPGVTGLHCERCEVNFFG
FSSSGCKPCDCDPEGAQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSC
YSLVRDKVNQQRQKLHDLQTLIDNLGSGQDTVTDKAFEDRLKEAERAIMDLLEEAQASKD
VDRGLLDRLNAINSTLTTQWNRLQNIRSTVDDTGTQADRARHRVQDAENLIDRARQELDK
AKDAISKVDIKAPSGTGDPNNMTLLAEEARTLADKHKMDADQIERIAKDANDTSTKAYNL
LLKTLAGEGKTSQEIDELNKKYNEAKELAKNLEKQANKIQAEAEDAGEKALKIFANLTSL
PPFDTKALENEASKIKKEASDLDKLIDKTEKEYNDLRDDLKGKEQEVRKLLEKGKSEQQT
ADQLLARADAAKALAEEAAKKGRSTFKEAEGILNDLRDFDRRVNDNKTAAEEALKKIPGI
NATIMAANEKTRQAEAALGNAAADAREAKNKAEEAEKIASNVQKGSAKTKEDAEKAFQDT
NKLDNEVDDMMDQLSAAERELARKKAEADQDMMMAGMASSSAKEAEDNARKAKSAVKTVL
STITALLDQLGNIDKVDLSKLNQIDESLKSAKGKMANSELDRKLAELNDVARTQEDMIND
YDRQIREIRADIANLNDIKNTLPDGCFNTPSLERP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttttgatccgggctctggtggcctgcagctgggtggcggcggtgtgcgtccgc
gccgccatggatgagtgcacggacgaggagggcagaccgcagcgctgcatgcccgagttc
gtgaacgccgcttttaacgttacggtggtggcgaccaacacctgcggctctccaccggag
gagtactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcc
cgggacccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggac
accacctggtggcagagccagaccatgctggcggggatccagtacccgaactccatcaac
ctcaccctgcacctcggtaaatccttcgacatcacctacgtccgcctcaagttccacacc
agccgcccggagagcttcgccatctacaagcggaccggcgagggcggcccctgggtgccc
taccagtactacagcggctcctgcgagaagacctaccagaagccgagcagcggcttcatc
cgcaccggcgaggacgagcagcaggcgcactgcaccgacgacttcagtgacatctcgccg
ctcaccggcgggaacgtggccttctccacgctggagggccggcccagcgcctacaacttc
gacaacagccccgtcctccaggactgggtgacggccacggacatcagagtgaccctgaac
aggctcaacacgttcggagacgaggtcttcaacgaccccaaggtcctcaagtcctactac
tacgccatctctgacttcgccgtgggaggaaggtgtaagtgtaacggccacgccagtgag
tgtctgaagaacagccgaggacgcctggtgtgcaactgcaaacacgacacagacggcgac
gactgcaacgtctgcaaaccgttctacaacgaccggccgtggaggagagcgaccgccgac
aacgccaacgagtgtctgccctgcgactgtaacgggaagagctccgagtgttacttcgat
gccgagctgtaccgggccacgggtcacggaggtcactgcaggggctgcgccgacaacacc
gacgggcctaactgcgagcgctgcctcgacaactactacagagagcagagcggcggccgc
tgcctgccctgcggctgcagcatcgtcggttcggagtctcctcagtgtgacaacagagga
gtgtgtgcatgcaaaccaggagtgagcggagagaagtgtgaccgctgccagccgggattc
cacagtctgacggaggccggctgcaggccttgttcttgctcgccctctggcagcactcag
gagtgtgacgtcaacacgggacagtgtcgctgcaaagaccacgtggagggcttcagctgc
gacaggtgtaagctgggttactttaacctggaccccaacaaccttcagggctgcaccccc
tgcttctgcttccagcactcgtctgtgtgcgacagcgccgaaggcttcagcgtgcacacc
atcagctcatccttccaaagaggtgacgagcattggaccggtcagcagcgtgatggctcc
agcgtctccgtgcagtggtccaacagcggacatgaaatctccctcatctcagacgactac
ttccccatgtactttgtagccccagagaagtttctggggaaccagatgttgagttacgga
cagaacctgagcctgaatttccgggttgaccggcgggacactcggctgtcggcggaggac
ctggtcctggagggagctaacctgagggtggctgtcccactcatcgcccagggcaacgcc
taccccaacgagaacatgcagacttatgtgttcaggctccatgacagcactgactacccc
tggaggccgaccatcagccactccaacttccagaaacttctccacaacctgaccgccatc
aagatccgcggcacctacagcgagcggagtgctggttaccttgatgacttctccctggtc
tcagcgaggcggggtccaggtattccggcccgctgggtcgagcagtgcacctgtcctcag
ggttaccaaggtcagcactgtgagcactgcactctgggataccggcgtgcccgtccggag
cttggagccttcagcccctgtgaggcctgcaactgtaacggacacagtgacgcctgtaac
cccgagacaggatcatgtgactgtcaggacaatacagccggtttgagctgtgagcgctgt
aaagacggtttctatggcgacgccacccgggggacgtcaggtgactgtcagccctgtccc
tgtcccgccggagccacctgcgccgtcatcctcaagaccagagaggtggtctgcaccaac
tgtcccacaggaaccacaggtaagcgctgcgagctctgtgatgacgggttcttcggcgac
cccctgggtcagagcggggcggtccgagcctgccgcgcctgcaagtgcagcgacaacatc
gaccccaatgccgtcggaaactgcaaccgcgagactggcgagtgcctcaagtgcatctac
aacaccaacgggttcttctgcgaccgctgcaaggaaggcttctacggcaacgccctcgcc
gccaacccggccgacaagtgcaaaccgtgctcctgttctcctcttggcaccgtcgggcga
cagaccacctgttctcaggtcaccggtcagtgccagtgtctccccaacgtcgccgaacgc
gactgcagcgcctgccagcccggcttcttcaacctgcggagcggcgccggctgcgagcgg
tgcaactgcaatccaattggctctaccaacggtcagtgtgacatcacgtcgggacagtgc
gagtgtcagcccggcgtcaccgggctgcactgcgagcgctgcgaggtcaacttcttcggc
ttcagctcatcgggatgcaaaccctgcgactgcgaccccgagggcgcccagtcgggtcag
tgtaaggaggatgggcgctgcgagtgccgacccggcttcgtcggagcgcgctgcgacatg
tgcgaggagaattacttctacaaccgctcggcgccgggctgccagcagtgtccttcctgc
tacagtctggtcagagacaaggtgaaccagcagaggcagaagcttcacgacctgcagact
ctgatcgataacctgggctcgggtcaggacaccgtcaccgacaaggccttcgaggaccgg
ctgaaggaggcagagcgagccatcatggacctgctggaggaggctcaggccagcaaagat
gtcgacagaggtctgctggatcgtctgaacgccatcaacagcactctgaccacccagtgg
aaccgcctgcagaacatccgcagcacggtggacgacactggcactcaggccgaccgcgca
cgccaccgagtccaggacgccgagaacctgatcgaccgagcccggcaggagctggacaag
gccaaggacgccatcagtaaagtggacatcaaagcccccagcggcaccggagatccaaac
aacatgacgctgctggctgaggaggcccgaacgctggccgacaagcacaagatggacgcc
gaccagatcgagaggattgccaaagacgccaacgacacgtcgaccaaagcgtacaacctg
ctgctgaagactctggccggggagggcaagacgagtcaggagatcgacgagctcaacaag
aagtacaacgaggcgaaggagctggcgaagaatctggagaagcaggccaacaagatccag
gccgaggccgaagacgccggagagaaggctctgaagatcttcgccaacctgaccagcctc
ccgccgttcgacaccaaggctctggagaatgaagccagtaagatcaagaaggaggcgtcg
gacctcgacaagctgatcgacaagacggagaaggagtacaacgacctgagagacgacctg
aagggcaaagagcaggaagtgcgcaagctgctggagaagggaaaaagtgagcagcagacc
gcagatcagctgttggctcgggccgacgctgccaaggctctggctgaggaggcggcgaag
aagggccggtccaccttcaaggaggccgagggcatcctgaacgacctcagagacttcgac
aggagggtcaacgacaacaagaccgcggccgaggaagcattgaagaagatccccggcatc
aacgccaccatcatggccgccaacgagaagaccaggcaggcggaggcggcgctcggcaac
gcggccgccgacgcccgggaggccaagaacaaggcggaggaggccgagaagatcgccagc
aacgtgcagaagggctcagccaagaccaaggaggacgcagagaaggccttccaggacacc
aacaagctggacaacgaggtcgacgacatgatggaccagctgagcgccgcggagcgggag
ctggccaggaagaaggccgaggcggaccaggacatgatgatggctggaatggcgtcgagc
agcgctaaggaggcggaggacaacgcccgcaaggccaagagcgccgtgaagacggtcctg
agcaccatcaccgccctgctggatcagctgggaaacatcgacaaggtggacctgagcaaa
ctgaaccagatcgatgagtccctgaagagcgccaagggcaagatggccaacagcgagctg
gacaggaagctggcggagctgaacgacgtggcgcggacccaggaggacatgatcaacgac
tacgaccggcagatccgcgagatccgcgcagacatcgccaacctcaacgacatcaagaac
acgttacccgacggctgcttcaacacgccgtccctggagaggccttaa
DBGET
integrated database retrieval system