Mycolicibacterium sediminis: MSEDJ_05140
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Entry
MSEDJ_05140 CDS
T07629
Symbol
recR
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MSEDJ_05140 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_05140 (recR)
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSEDJ_05140 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSEDJ_05140 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH
HHH_5
HHH_8
IMS_HHH
DZR
zinc_ribbon_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BBY26418
UniProt:
A0A7I7QJF1
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All DBs
Position
complement(511709..512320)
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AA seq
203 aa
AA seq
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MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLARVREGVTFCSVCG
NVSDNERCRICSDPRRDAALICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQ
LRIRELLNRIGERVDGVDVGEVIIATDPNTEGEATATYLVRMLRDIPGLSVTRIASGLPM
GGDLEFADELTLGRALAGRRAMA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggggcccgtccaggacctgatcgacgagctgggcaagctgcccggtatcggt
ccgaagagcgcccaacgcatcgccttccacctgctgtcggtggagccgcccgacatcgac
cgcctcaccgccgtgctcgcccgcgtacgcgagggcgtgaccttctgctcggtgtgcggc
aacgtctcggacaacgagcgctgccggatctgcagcgatccgcgtcgtgacgccgccctg
atctgcgtggtcgaggagccgaaggacgtgcaggccgtcgagcggaccagggagttccgc
gggcgttaccacgttctcggtggcgcgctcgatccgctctcgggcatcggacccgatcag
ctgcggattcgtgagctgctcaatcgcataggcgagcgggtcgatggcgtcgacgtcggc
gaggtcatcatcgccaccgaccccaacaccgagggcgaggcgaccgccacgtacctggtg
cgcatgcttcgcgacatccccggtctgagcgtcaccaggatcgcctccggactgccgatg
ggcggcgacctcgagttcgccgacgaactgacgctcgggagggcgttggccggtcgtcgg
gcgatggcctag
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