Mycolicibacterium sediminis: MSEDJ_35010
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Entry
MSEDJ_35010 CDS
T07629
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msei03016
]
MSEDJ_35010 (truB)
Enzymes [BR:
msei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSEDJ_35010 (truB)
Transfer RNA biogenesis [BR:
msei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSEDJ_35010 (truB)
Prokaryotic type
MSEDJ_35010 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
DUF5785
Motif
Other DBs
NCBI-ProteinID:
BBY29405
UniProt:
A0A7I7QT47
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All DBs
Position
3629291..3630181
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AA seq
296 aa
AA seq
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MTAPPAPGIVVVDKPGGMTSHDVVGRCRRLFGTRKVGHAGTLDPMATGVLVIGIERATKI
LGLLTATDKSYAATVRLGQSTSTEDAEGELLQSIPAGHVTDAAIEDAVAGLRGAIDQVPS
SVSAIKVDGERAYKLAREGRSVELAARPVRISRFDVVAVRRTGDLVDVDVEVDCSSGTYV
RALARDVGAALGVGGHLTALRRTRVGGFGLDVGRTLEQLADEPRLSLSLDEACLLAFPRR
ELSVEEAESATHGRALAPAGIDGTYAATAPSGDVVALLADDGAKTTSVVVIRPATL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgcctcctgcgccgggcatcgtcgtcgtcgacaagcccggggggatgacgagc
cacgacgtcgtcgggcggtgccggcgcctgttcggcacgcgcaaggtcggccacgcgggc
accctcgatccgatggcgaccggggtgctcgtcatcggcatcgaacgtgccacgaagatc
ctcggactcctcaccgccaccgacaagtcctacgccgccaccgtccggctcggccagtcc
acgtccacggaagacgccgaaggcgaactgctgcagtcgatcccggcgggccacgtcacc
gacgccgccatcgaagacgcggtcgcgggcctgcgcggtgccatcgaccaggtgccgtcg
tcggtcagcgcgatcaaggtcgacggcgagcgcgcctacaagctggcccgggagggccgg
tcggtggaactggccgcccgaccggtgcggatctcgcgcttcgacgtcgtggccgtccgt
cgcaccggcgacctcgtcgacgtcgacgtcgaggtggactgctcgtcgggcacctacgtg
cgggccctggcgcgcgacgtcggcgccgcgctcggcgtgggcggccacctgacggccctg
cgccggacgcgggtcgggggcttcggcctcgacgtgggacgcaccctcgagcaactggcc
gacgagccgcggctgagcctgtccctggacgaggcgtgcctgctggcgttcccgcgccgg
gagttgtcggtggaggaggcggagtcggccacgcacggcagggcactggcgccggccggg
atcgacggaacgtacgcggccaccgcgccctcgggtgacgtcgtggccctgctcgccgac
gacggggcgaagaccacgtcggtggtggtcatccggcccgcgacgctgtag
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