Metabacillus sediminilitoris: GMB29_20680
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Entry
GMB29_20680 CDS
T07731
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
msem
Metabacillus sediminilitoris
Pathway
msem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GMB29_20680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_20680
DNA repair and recombination proteins [BR:
msem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GMB29_20680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Motif
Other DBs
NCBI-ProteinID:
QGQ47462
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Position
complement(4291868..4294228)
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AA seq
786 aa
AA seq
DB search
MQQKVLHVLEFEKVKDQLVKHASSSLGKEKVRELIPSSNFDEVVTSQDQTDEAAKVIRLK
GNVPLGGLVDVRATVKRAKIGGLLSASELNEVAGTLYAGRNMKRFIEKMVEEGIEIYHLP
MIAEKIVILHELEKDIATCIDDNGYVLDSASETLKGIRVQLRTTEARVRDKLESMIRSSA
ATKMLSDAIITIRNDRFVLPVKQEYRSSYGGIVHDQSSSGATLFIEPQVIVDLNNTLQQA
KVKEKVEIERILRLLSDKVAENSHDILQNVYCLAEMDFMFTKAKYAKQIKGIKPAVNNDG
IINLIKARHPLLPENEVVPNDIELGTDFTTIVITGPNTGGKTVALKTLGLCTLMAQAGLQ
IPAQDGSETAVFDAVYADIGDEQSIEQSLSTFSSHMVNIVDILDKVNEKSLVLFDELGAG
TDPQEGAALAISILDEVYGRGARVVATTHYPELKAYGYNRSGVINASVEFDITTLSPTYK
LLIGVPGRSNAFEISKRLGLQEHVINMAKAQMSDERNEVDTMIASLETSKKSAEQERLEA
EKIRKEAEQLHKELQQQIIEFNQQRDALYEKAELKAEQKVEEARQEAEKIIHELRRLRKE
QHATIKEHELIDARKRLENAVPTFEKSKKVEKKETVKQTFLPGDEVKVISFDQKGHLIDK
VSDNEWQVQMGIMKMKVKEKDLLYIKRAKQEVQEKPLATVKGKDYHVSLELDLRGERFEN
ALLRVEKYLDDAVLAGYPRVSIIHGKGTGALRTGVKELLKNHRSVKNTRLGEAGEGGTGV
TIVELK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcaaaaagtattacatgttttagaatttgaaaaagtaaaagaccaacttgttaaa
catgcatcatcctcattgggaaaagaaaaggttagagagttaataccatcaagtaatttt
gatgaagtggttacttcacaggatcaaacagatgaagcagcaaaggtcattcgtttaaag
ggaaatgtacccctaggaggattagttgatgttagagcaactgtaaaacgggcaaaaatc
ggcggtttactgagtgctagtgaattaaatgaagtagcaggcaccctttatgcgggacga
aatatgaaacgttttatagaaaaaatggttgaagaaggaattgagatataccatctgcca
atgattgcagaaaaaatagttatcctgcatgagctagagaaagatattgcaacttgtatc
gatgataatgggtatgtattagacagtgcaagtgaaacattaaaagggattcgcgtgcag
cttagaacaacagaagcaagagtgagagataagttagaatcgatgattcgctcatctgca
gcaactaaaatgctctctgatgcgataatcactatccgaaatgaccgttttgtcttacct
gttaaacaagaataccgttcctcatatgggggaattgttcatgatcaatcaagctctggt
gcaacattatttattgagccacaagttatcgtggatttaaataatacacttcagcaagca
aaagtgaaggaaaaggttgaaattgagcggattttaaggcttttatctgacaaggttgca
gaaaacagccatgacatactacaaaatgtatattgtttagctgaaatggattttatgttt
acaaaggcgaaatatgcaaaacaaataaaaggaataaagcctgctgttaacaacgatggg
attataaacttaataaaagcacgtcatcctcttttaccagaaaatgaagtcgttccaaat
gatattgagctgggtacagactttacgacaattgttattactggtcctaatacaggtgga
aagacggttgcattaaaaacattaggtttatgtacattaatggctcaagcaggtttgcaa
atccctgcacaggatggttccgaaactgcagtgtttgatgctgtctatgcagacattggt
gatgagcaatcgattgagcaaagcttaagtacgttttcttcacatatggtgaatattgtt
gatatccttgataaagtgaatgaaaagagcttagttcttttcgatgagcttggagcagga
acagatccacaagaaggtgctgcacttgcgatatctattcttgatgaggtgtatggaaga
ggagcaagagttgtggcaacaacacattatccagaattaaaagcatatggctacaaccgc
agtggagtcattaatgcaagcgttgaattcgatattacaacgttaagtccaacttataag
cttttaatcggtgtccctggacgaagcaatgcgtttgaaatttccaaaaggctgggctta
caagaacatgttataaacatggcaaaggctcaaatgagcgacgagcgaaacgaagttgat
acgatgattgcctccttggaaacgagcaaaaaatcggcagagcaagaaagactggaagct
gaaaaaattcgaaaagaagcggaacagcttcataaagagcttcaacaacaaatcattgag
tttaatcagcagcgtgatgcattatatgaaaaagcagaactaaaagcagagcaaaaggtt
gaagaagcacgtcaagaagcagagaaaatcattcatgagttaagaaggttaagaaaagaa
cagcatgctacaataaaagaacatgagttaattgacgcacgaaaacgcttagaaaatgca
gtgccaacatttgagaaaagcaaaaaggttgaaaagaaagaaacggttaaacaaacattt
ttacccggtgatgaagtaaaagtgataagctttgatcagaaaggtcatttaattgataaa
gtaagtgacaatgaatggcaagtgcaaatgggaataatgaaaatgaaagtaaaagaaaaa
gatctgctttatataaagagagctaaacaggaagtacaagaaaagccgctggcaactgta
aaaggtaaggattatcacgtctcacttgaattagatttacgtggcgagcgctttgagaat
gcattgcttagagttgaaaaatatttagatgatgcagtcttagctggctatccaagagta
tcgattattcatgggaaaggtacaggggcactccgaacaggtgtgaaggaattattgaaa
aatcaccggagtgtaaaaaatactcgtttaggagaagccggtgaaggtggtactggtgta
accattgttgaactcaaatag
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