Mergibacter septicus: CEP49_05300
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Entry
CEP49_05300 CDS
T08622
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msep
Mergibacter septicus
Pathway
msep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP49_05300 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msep03019
]
CEP49_05300 (recQ)
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_05300 (recQ)
Enzymes [BR:
msep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEP49_05300 (recQ)
Messenger RNA biogenesis [BR:
msep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEP49_05300 (recQ)
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEP49_05300 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AWX14010
LinkDB
All DBs
Position
complement(1194605..1196419)
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AA seq
604 aa
AA seq
DB search
MPALIENQPITSALSVLKQVFGYQHFRQGQQEVIEAVLQGKDCLTVMATGNGKSLCYQIP
ALCFDGMTLVISPLIALMQDQVDQLATNGIEAAYLNSTQDFATRQAVENRAISGQLKLLY
LSPEKVMTSAFFHFIHQCKVSFIAIDEAHCVSQWGHDFRPEYSQLGKLKSYFTNIPVMAL
TATADETTRLDILHHLKLHQPYQYIGSFDRSNIRYTLVEKVKPFEQLISFVKSQKGKSGI
IYCNSRSKVEKITELLAKKGVNAAGYHAGMDAVLREKIQRDFQRDNLQIVVATVAFGMGI
NKSNVRFVLHFDLPRSIEAYYQETGRAGRDDLPAQAVLFYNPADYLWLKQVLEEKPKSEQ
QRIEQHKLQLMGEFAEAQTCRRLVLLNYFGEYRQTPCGNCDICLDPPKKYDALVDAQKFL
SVVYRTGQRFGLHYVIGVLRGLHNQKIKDYQHDKLSVYGIGKEKSAEHWISISRQLVHLG
YLVQNITNHSALQLTKAARPLLRGDISLQLAIPRFSLVATPKVVRKGGNYDKDLFSRLRF
LRKQIADKENIPPYVIFNDATLQEMAQYHPTSNAEMLEINGVGERKLERFAPAFLQIIRE
YQAR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttgatagaaaatcaaccaataacatcggctttatctgtattgaagcaggtt
ttcggctatcaacattttcgtcaaggacaacaagaagttattgaggcagttttacaaggc
aaagattgtttaaccgtgatggcaacaggaaatggcaaatcactttgctatcagatccca
gcactttgttttgatggaatgactctagttatttctcctttgatcgccttgatgcaagat
caagttgatcaattggcgacgaatgggattgaagcagcttatcttaattccacccaagat
tttgcgactagacaagcagtagaaaatagggcaattagtggacagttaaaactactttat
ctttcacctgaaaaagtgatgacgagtgctttcttccattttattcatcaatgtaaagtg
agttttattgctattgatgaagcacattgtgtgtcacaatgggggcatgattttcgtcct
gaatatagtcaattaggtaagttgaagagctattttactaatattccagtgatggcatta
actgctactgcagatgaaacaactcgccttgatattttacatcacttaaaactacatcag
ccttatcaatatatcgggagttttgatcgttcgaatattcgttatacgttggttgagaaa
gtcaaaccgtttgaacagctaattagttttgtaaagtcccaaaaagggaaaagtggcatt
atttattgtaatagtcgtagtaaagtagaaaaaatcacagaattactcgctaaaaaagga
gttaatgcagcaggttatcatgctggtatggatgctgtattgcgtgaaaaaattcaacgg
gattttcaacgagataatttgcagatagtggtggcaacggttgctttcggtatgggaatt
aataaatcaaatgttcgctttgtgttgcattttgatcttccccgtagtattgaggcttat
taccaagaaacaggccgagcagggcgtgatgatctgcctgctcaagcggtacttttttat
aatcctgccgattatctctggttaaaacaagttttagaagaaaagcctaagagtgaacaa
caacggattgaacagcataaattacaattaatgggggagtttgcagaagctcaaacatgt
cgccgtttagtcttattaaattattttggtgaataccggcaaacaccttgtggcaactgt
gatatttgtttagatcccccgaaaaaatatgatgcattggttgatgctcaaaaattttta
tctgtggtatatcgtactgggcaacggtttggtttgcattatgtaattggtgtattgcgt
ggtttacataatcaaaaaattaaagactatcaacatgataaattatctgtttatggtata
gggaaagagaaatcagcagagcattggatcagtattagtcgtcagctagttcatttaggt
tatctggtacaaaatattactaaccattccgcattacagttgactaaagcagctcgccca
ttattacgtggtgatattagtttacaacttgcgataccacgtttttctttagtagcaaca
ccgaaagttgtgcgtaaaggtgggaattatgataaagatctattttcacgtttgcgattt
ttacgcaaacaaatcgcagataaagagaatatccctccttacgttatttttaatgatgcg
acgttacaagaaatggctcaatatcatccaacctccaatgctgaaatgttagaaattaat
ggggtaggggaacgtaaattagaacgttttgcaccagcatttttacagataattagagaa
tatcaggcaagataa
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integrated database retrieval system
