Manduca sexta (tobacco hornworm): 115446089
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Entry
115446089 CDS
T07401
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115446089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msex04040
]
115446089
Ion channels [BR:
msex04040
]
Ligand-gated channels
GABA-A
115446089
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115446089
NCBI-ProteinID:
XP_030028507
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Position
27:6500218..6548705
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AA seq
496 aa
AA seq
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MHTSRPRGVHTVALVLALAIAWLPHADYAAGTGGGGMFGDVNISAILDSLSVSYDKRVRP
NYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEF
IRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMDLQYFPMDR
QLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSR
LACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSS
TNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFTAVQKMAAEKK
MQIDGPPGTSEPLPPPRTSTLNRPPPPSRSSEVRFKVHDPKAYSKGGTLENTINGARAAA
PPPAPQPDEEAGPPPHLLHASKGINKLLGTTPSDIDKYSRIVFPVCFVCFNLMYWIIYLH
VSDVVADDLVLLGEEN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgagccgtccgcgcggcgtgcataccgtcgctctcgtgctggcgctcgcgatt
gcctggttgccgcatgccgactacgccgctggaacgggcggaggagggatgtttggagac
gtcaatatttctgctattttggactctctaagcgtaagctatgacaagcgagtcaggccg
aattatgggggaccgccagtggatgtgggagtcaccatgtacgtgctctccatcagctcc
ttatctgaagtgaaaatggattttacgctggatttctacttcagacagttttggaccgac
ccgcggctcgcttacaaaaagagaacgggtgttgaaactctgtctgtcggatcagaattt
attaggaatatatgggtgccagatacgttctttgtaaatgaaaaacagtcttatttccac
attgcaactacgagcaacgaattcattcgtattcatcattctggatctattacacgaagc
ataagactgactatcaccgcgtcttgcccaatggatttgcaatattttcctatggaccgt
caattatgcaacatcgaaattgagagcttcggctacaccatgcgggacatccgttacaag
tggaacgaggggcccaattcagtgggcgtatcgagcgaagtgtcactgccgcaattcaag
gtgctgggccatcgtcagcgagctatggaaatctccctaactacaggaaactattcacgg
ttggcgtgcgaaattcaattcgtccgatccatgggctactacttgattcaaatttacata
ccatccggtcttatcgtcattatatcgtgggtctcattctggttgaatcgcaatgctaca
cctgctagagtgtccttgggagtaaccactgtattgacgatgacgacgctcatgtcctcc
actaacgccgctctgcccaagatctcgtatgtcaagtctattgacgtttacctcggcacc
tgcttcgtgatggtcttcgccagtttactagagtatgctactgttggatatatggcgaaa
cgtatacaaatgaggaaacaaagattcactgctgttcagaaaatggccgccgaaaagaaa
atgcaaatagatggcccgcctggaacatctgagccattgcccccaccgcgaaccagtact
cttaaccgacctccgccaccgagtagatcttcggaagttcgattcaaagtccacgaccct
aaagcatattccaagggtggcacgttagagaatacgataaatggagctcgggctgcggcc
ccgccgcccgccccgcaacccgacgaggaagcaggacccccgccacatcttttacacgca
tcaaagggcatcaacaagctcctgggtaccacgccatcggacatcgacaagtactcgcgc
atcgtgtttccagtttgcttcgtctgctttaacctaatgtactggatcatttatctgcac
gtgtctgacgttgttgccgacgatctggttctacttggcgaagaaaactaa
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