Manduca sexta (tobacco hornworm): 115447844
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Entry
115447844 CDS
T07401
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msex04121
]
115447844
Enzymes [BR:
msex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115447844
Ubiquitin system [BR:
msex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115447844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_3
Cadherin_C_2
zf-RING_16
zf-ANAPC11
TMEM132D_C
zinc_ribbon_15
DUF4663
zf-RING_4
PHD
Motif
Other DBs
NCBI-GeneID:
115447844
NCBI-ProteinID:
XP_037300797
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All DBs
Position
28:complement(13287328..13315175)
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AA seq
451 aa
AA seq
DB search
MLCAVVIGLLGLVASVYGNLVVYTQEKPHSIMQEFLDIPASFGGDLPPEGLRGLLVAGEP
ADGCSALVKPPVVDNFTGKWIVLVARYNCSFEIKVRNAQLAGYDCAIVHNVNSSDLETMS
AKDPAGIIIPSVFVSDLTGYLLGDEYLYNQGFYIMVNDDLPFNINTHLLLPFAVVVVLCL
LAILIFLIVKCIKDRRRARRHRLPPRSLAKIPTCKFSKGDPYDTCAICLDDYKEGERLRV
LPCAHAYHAVCIDPWLTQNKRVCPVCKRRVLAAGERRVTTHSNSDSDSDTEPLLPEPTRP
QPTQGGTFEEQRENPFTRAARFMARLRRERPQENAEEPSTQSEEHEAPEENTSSDRQPLV
RAVSERRARRARSRASPAHAQATAPASAAPAPAPAPPAPAPAPPAPAPVAHAPAALAPDV
ASINSQREPDTGDIGVAALPASEATSQHVNL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcgcagtggtcataggcctgctaggcctggtagcctccgtgtatggcaatttg
gttgtctacactcaggagaagccgcattcgatcatgcaggagttcctggacatcccggcg
agcttcggcggcgacttgccgcctgaaggtctgcgcgggctgctggttgctggtgagccg
gcggacgggtgttcagcgctcgtcaagccgcccgtcgttgacaacttcactggcaagtgg
atcgtgctcgtcgccagatacaactgcagcttcgagataaaagtgcgtaatgctcaactc
gccggctacgattgcgccatcgtgcacaacgtcaactctagtgacttagagactatgtca
gcaaaggaccccgcgggaataatcataccttcagtgttcgtgagtgacttgaccgggtat
ttattaggtgacgagtatctgtacaatcaaggtttctatataatggtgaacgatgacctg
ccgttcaacataaacacgcatctgttgctccccttcgccgtggtcgtggtactgtgtctc
ctcgccattctcatatttctgatagtgaagtgcataaaggaccgtcgccgcgcgcgccgg
caccgcctgccgccgcgctcgctggccaagatacccacgtgcaagttcagcaagggcgac
ccctacgacacgtgcgccatctgcctcgacgactacaaggagggcgagcggctgcgcgtg
ctgccgtgcgcgcatgcgtaccacgcggtgtgcatcgacccgtggctcacgcagaacaag
cgcgtgtgtcccgtgtgcaagcggcgcgtgctggcggccggcgagcggcgcgtcactacg
cattccaactccgactccgactcggacacggagccgctgctgccggagcccaccaggccg
cagccgacgcagggcggtacgttcgaggagcagcgcgagaacccgttcacccgcgcggct
cggttcatggcgcggctgcgacgcgagcggccacaggagaacgccgaggaaccatctaca
cagtcggaggaacacgaggcccccgaggagaacacgtcgtcggacagacagccgttggtg
cgcgccgtgtcggagcgtcgggcgcgccgcgcacgctcccgcgcctcccctgcgcacgcg
caagccaccgcgcccgcctccgccgcgcctgcgcccgcacccgccccgcccgcgcccgca
cccgccccgcccgcgcccgcacccgtcgcgcacgcgcccgccgcgctcgcgcccgacgtc
gcctccatcaactcgcaacgcgaaccagacaccggcgatatcggtgtagctgccctacct
gcgtcagaagcgacgtcacaacacgtcaacttatga
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