Mycolicibacterium smegmatis MC2 155: MSMEI_5954
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Entry
MSMEI_5954 CDS
T02191
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB1
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
msg
Mycolicibacterium smegmatis MC2 155
Pathway
msg00550
Peptidoglycan biosynthesis
msg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MSMEI_5954
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msg01002
]
MSMEI_5954
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msg01011
]
MSMEI_5954
Enzymes [BR:
msg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MSMEI_5954
Peptidases and inhibitors [BR:
msg01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
MSMEI_5954
Peptidoglycan biosynthesis and degradation proteins [BR:
msg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
MSMEI_5954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
DUF6479
Motif
Other DBs
NCBI-ProteinID:
AFP42387
UniProt:
A0R596
LinkDB
All DBs
Position
complement(6177146..6178588)
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AA seq
480 aa
AA seq
DB search
MSDRLTRRGGSPRSIESRGSMRPTRWRRSTHVAVGVAVLALVVAVVAAAALFTGKHSDAA
EAVPPAPPPATADPGVVPVDLSAPTPTRRGLATALAAALANPDLGLITGRITDADTGAEL
WEQGARVPMQPASVNKVLTTAAALLTLDRDARLTTTVVAADDQPGLVVLRGGGDTTLSAA
PKGTDTWYKGAARISDLADQVRARGIRVTRVRVDTSAYSGPTMAPGWDPADIDGGDIAPM
ESVMLDGGRTQPTTVESRRSKSPALDAGKALAAALGVEPESVTLMPSGMRGGTTIAEVQS
APLIERLRQMMNESDNVMAESIAREVAEALGRPQSFEGAVGAVLTQLRSVGIDTSGAKLV
DSSGLSVDNRLTALTLDEVVNAAAGHTQPALRPLVDLLPIAGGSGTLSNRYLDTDAGRAA
AGWLRAKTGSLTGTNALAGIVTDRSGRVLTFALISNNAGPTGRTAIDALAAVLRSCGCGA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataggctgacgcgcaggggtggctcaccaaggtcgatcgagagcaggggaagt
atgcggcccactcggtggagacggtccacccacgtggcggtaggtgttgcggtgctcgcg
ctcgtcgtcgccgtcgtcgccgccgcggccctgttcaccggcaaacactcggacgcggca
gaggccgtgccgcccgccccgccgcctgccaccgccgatcccggcgtcgtaccggtcgac
ctgtcggcgcccacaccgacgcgccgcgggctggcgaccgcccttgcggccgcgctggca
aaccccgatctgggtctgatcacaggccgcatcaccgacgccgacacgggcgccgagctg
tgggaacagggtgcgcgcgtgcccatgcagcccgcgtcggtcaacaaggtgctcaccacc
gcggccgcgctgctgaccctcgaccgcgatgcgcggctcaccaccacggtggtcgccgcc
gacgaccaacccggcctggtggtgctgcgcggcggcggcgacaccacactctcggccgcg
ccgaagggcaccgacacctggtacaagggtgcggcccgcatcagcgacctcgccgaccag
gtccgcgcacgcggcattcgcgtgacccgtgtgcgcgtcgacaccagcgcgtacagcggc
cccaccatggcacccggctgggacccggccgacatcgacggcggcgacatcgcccccatg
gaatcggtgatgctcgacggtgggcgcacacagcccaccaccgtggaatcgcggcggtcg
aagagtcccgcgctcgacgcggggaaggcgctggccgctgcgctgggcgtcgaaccggag
tcggtgacgctgatgccgtccggcatgcgtggcggcaccacaatcgccgaggtgcagtcg
gcgccgctcatcgagcggctgcggcagatgatgaacgagtcggacaacgtgatggccgag
tcgatcgcccgtgaggtcgccgaggcgcttggccggccacagagcttcgagggtgccgtc
ggggcggtgctgacccagctgcgatccgtgggcatcgacacctcgggtgccaagctcgtc
gactccagcggcctgtcggtcgacaaccggctgaccgcgcttaccctcgatgaggtggtc
aacgccgctgccggacacacccagcccgctctgcggccgctggtggacctgctgcccatc
gccggtggcagcggcaccctgtccaaccgctacctcgacaccgacgccggccgtgccgca
gcggggtggctgcgcgccaagaccgggtcgctgaccggaaccaacgcgctggcaggcatc
gtcaccgaccgcagcggccgggtgctcacgttcgcgctgatctccaacaacgccgggccc
accggacgcaccgcgatcgacgctctggccgcggtgctgcgcagctgcggatgcggcgca
tga
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