Mycobacterium shigaense: MSG_00969
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Entry
MSG_00969 CDS
T05717
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mshg
Mycobacterium shigaense
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mshg03021
]
MSG_00969
Transcription machinery [BR:
mshg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MSG_00969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
DUF6456
Motif
Other DBs
NCBI-ProteinID:
BAX91128
UniProt:
A0A1Z4EDV2
LinkDB
All DBs
Position
1001937..1002485
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AA seq
182 aa
AA seq
DB search
MTAFNEPGGPRSLRAVPDQGFEGYRDWEAVYSDNATWVYRMLFARVGNQADAQDLTAEVF
LAALRPLRLTASVGEIRAYLRTTARTVLAAHWRETLGREITSIDDTEQPPESEEAISTAP
QRVAQVLDALPDRYRRILELRFLQGNSIKESATELGISVANAKVLQHRALRLAAQVNDGG
QS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgttcaacgaacccggcggcccgcggtccctgcgcgcggtgcccgaccagggc
ttcgagggctaccgcgattgggaagcggtgtactccgacaacgccacctgggtgtaccgc
atgctgttcgcccgagtcggcaaccaggccgacgcccaggacctcaccgccgaggtcttc
ctggcggcgctgcggccgctgcgcctgaccgcgagcgtgggcgaaattcgcgcctacctt
cggaccacggcccgcacggtgctggccgcgcactggcgggaaaccctggggcgggagata
acctcgatcgacgacaccgaacaaccgccggagagcgaggaagcgatcagcaccgcacca
cagcgtgtcgcccaggtgctcgacgcgctgccggaccgctatcgccgaattctggaattg
cgattcttgcaaggtaattcgatcaaggagtcggctaccgaactcgggataagcgtcgcc
aacgccaaggtgttgcagcatcgcgcactgcggttggcggcacaggtcaacgatgggggc
cagtcatga
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