Mycobacterium shottsii: MSHO_42950
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Entry
MSHO_42950 CDS
T07303
Name
(GenBank) hypothetical protein
KO
K21685
LuxR family transcriptional regulator, regulator of acetate metabolism
Organism
msho
Mycobacterium shottsii
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msho03000
]
MSHO_42950
Transcription factors [BR:
msho03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
MSHO_42950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
GAF
Sigma70_r4
GAF_2
HTH_24
HTH_23
HTH_28
HTH_10
HTH_38
KORA
Motif
Other DBs
NCBI-ProteinID:
BBX58950
UniProt:
A0A7I7LH73
LinkDB
All DBs
Position
complement(4160393..4161628)
Genome browser
AA seq
411 aa
AA seq
DB search
MGFSPRRAIPERTVGGVIDAVDMPDPPAFPTLADDEHPGWASRPIRESDATRHYREAFGD
CNVDPTDDPMAVVAEAIDVNAAAVRHALESLGDVHAVNALETLLDLSSLEREMIEDGAAR
RTLALLQVQEALSKLRAVDDVAMIVDRAPRELVESCGFDRAVLFRAHEGRMVTESAYFGE
DREGAEKMVAFAQSVAPLLDHMLIETQMIRRHAPAIVRDARNDPRVNRPIVDFSLTHSYV
AAPVMPTGKVIGFLHADRLYSGRIVDEIDRDTVWAFAEGFGYAYERTVLLERMRRQHAEV
RSALASADEAARALQDADLDLRKIEPVERCPAARSLAEVQTRVMAMLTRREVEVLRLMAA
GRTNQQIADELVISAGTVKSHVKRVLRKLHATNRAEAASAYVRLASVPEVG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgggcttttcgccgcgacgggccatcccggagaggacagtgggaggggtgatcgatgcg
gtcgatatgcccgatccccccgcattccccacgttggccgacgacgagcaccccggctgg
gcgtcgcgtccgatacgggaaagcgatgccactcgtcactatcgggaagcgttcggcgat
tgcaacgtcgatcccaccgacgaccccatggcggtggttgccgaggccatcgacgtcaac
gccgccgcggtgcgccacgccctggagtccctcggtgacgtgcatgcggtcaacgccctc
gaaacgctgttggatttgtcctcgctggaacgggagatgatcgaggacggtgccgcacgc
cgcacgctggcgctgttgcaggtgcaggaggctttgagcaagctgcgcgccgtggacgac
gtcgcgatgattgttgaccgggcgccgcgtgaactggtggagtcgtgcgggttcgatcgt
gctgtgctgtttcgagcgcacgaaggccgaatggtgacggaatcggcctactttggggaa
gaccgtgaaggtgcggagaagatggtcgccttcgcgcaatcggtggcaccgctgttggat
cacatgctgatcgaaacccagatgattcgccggcacgcgcccgcgatcgtgcgcgatgcc
cgcaatgatccgcgggtgaatcgaccgatcgtggacttttcgctgacgcattcctatgtg
gcggccccggtgatgccgaccggcaaagtgatcggtttcctgcacgccgatcggttgtac
tccgggcgcatagtcgacgagatcgaccgagacacggtgtgggcgttcgccgaaggcttc
ggatatgcctatgagcgaacggttctgctggagcgcatgcggcgccagcacgccgaggtg
cgcagtgcgcttgcgtccgcggacgaggcggcgcgcgctctgcaggatgccgatctggac
ctgcgcaagatcgagccggtcgaacgttgccccgcggcacggtcgttggccgaggtgcag
acgcgagtgatggccatgctgacccgccgggaagtggaggtgctgcggctgatggcggcc
ggccgcaccaatcagcagatcgccgacgaactggtgatctcggccggcacggtgaaatct
catgtcaaaagggtgctgcggaagctgcatgcgacgaatcgggccgaggcggcctcggcg
tacgtccggttggccagcgttcccgaagttggttga
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