Mycobacterium shottsii: MSHO_44990
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Entry
MSHO_44990 CDS
T07303
Name
(GenBank) transcriptional regulator
Organism
msho
Mycobacterium shottsii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
AAA_22
nSTAND1
HTH_23
Sigma70_r4_2
AAA_16
Guanylate_cyc
TPR_2
HTH_24
nSTAND3
NACHT
NB-ARC
HTH_38
HTH_40
AAA_25
TPR_14
AAA_33
RsgA_GTPase
ATPase_2
TPR_12
Motif
Other DBs
NCBI-ProteinID:
BBX59154
UniProt:
A0A7I7LHB0
LinkDB
All DBs
Position
4349169..4352405
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AA seq
1078 aa
AA seq
DB search
MDELLLTDTVTLLSADIEDSARLRQTQPTELGAALERLDQILADAVSAYGGVRAVEQPPG
ESLVVAFGRAQDAVECALQLQQAPLAPIRLCIGIHTGEVAQPRDDGTYAGPTIDRTARLR
DLARGGQTLLSAATKDMVINQLPEQAWLTDRGLAPLRDLIHFERVAQLCHPNLRNEFPPL
CVTKSAAASGLPVHLTRFVGRGRELAEVHGLVVENRLVTLIGSGGVGKSRLAEQVVAQLA
AQFVDGVRYVDLGSITDPAVAPITMARALGLPNQPGRSAMDTLLHHLGDRQMLLLVDNCE
HLLDASAPRLGAMLRDCPGLRLLVTSREPIKVAGEVTWRVPPLAVDDAIALFTDRARLAQ
PDFALTDDNAGTVSQICRRLDTQPLGIELAAARVRTLSLAEISAGLDDKIRLLTGGARTA
VPRQQTLRASLEWSHGLLTDTERVLFRRLGVFVGGFDLQAAQAVAAFGDVHPRDVLGDLS
QLVDKSLVVADSSNGRTRYRRFEGVGQLALEKLRAAGEADIARARHCDHYTAVVAPLDRP
ARADYDFLLARVEGELENLRAASAWLLESSDGESALMLASRLQPLWLVRGLISEGRSWFD
AALAGASVLEVSPTVRARALADAAVLTMFVDVATSLESAAAALAIARELDDPASLVRALT
ACGLTASFSHHTEAVGQYFAEAASLAEELDNQWGLSQILSWQSNAAVVAGDAIAARRIGT
EGRDLADAIGDRFNSWLCRLSLGYAQLWQGDLTGATTQFGALSEAENLASLSSKGLGDAL
AYRGDVDAARTAAEAALERAAESSEYALGLGYSTVALAALAGGDVETARNASDLAWHKLS
AQPYAAMFWHSFRAEIALACGNVAGAKRCADEAVSVTTGWHRALALTTRARVAMAEGEPE
QAERAAYEALTCAADVGARTCLPDILECLGALAADQGRDREAARVYGAAEGIRQRIGAMR
FKIYDAGYQKSVAALHATMSTDEFDTAWAHGAAFSAEEAIDYLQHGRGEGKRATSGWAAL
TRAELNVVRLVGQGLSNKDIAQRLFLSPRTVQTHLTHVYTKLGFNSRVQLAQQAAQHS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
gtggacgagttgctgctgacggacacggtgacactgctatcggccgatatcgaggattct
gcgcggctgcggcagacacaacccaccgaactcggtgcggcgctggaacggctggatcag
atcctggccgatgccgtgtcggcatacggcggtgttcgagctgtcgagcagccccccggt
gagagcctggtggtcgcgttcggacgtgcgcaggacgcggtggagtgcgcgttgcagttg
cagcaggcgccgctggcgcccattcggttgtgtatcggaatacacaccggtgaggtggca
cagccgcgtgacgacggcacctatgccggcccgacgatcgaccgcacggcgcggctgcgg
gacctggcgcgcggcggccagacgctgctgtcggccgcgaccaaggacatggttatcaac
cagcttccggagcaggcctggttaaccgaccgcggattggcgccgctgcgcgatctcatt
cacttcgaacgcgtagcgcagctgtgccatcccaaccttcgcaacgagttcccgccgctc
tgtgttacgaaaagcgctgccgcgtccggtcttccggtgcacctgacaagatttgtgggc
cgcggccgcgagctggccgaggtccacgggctggtggtggagaaccgactggtgacattg
atcgggtccggtggggtgggcaagagtcgactagccgaacaggtcgttgcccaactggcg
gcgcagttcgtcgatggtgtgcgctacgtcgatctgggctcgatcaccgatcccgccgtc
gcgccgatcacgatggctcgcgcgctgggtctgccgaaccagcccggccgctcggcgatg
gacacgctgctgcaccacctcggtgatcgccagatgctgctgctggtcgacaactgtgag
catctactcgatgccagcgccccgcgtctgggcgccatgctgcgcgactgccccggcttg
aggctgctggtcaccagccgcgagccgatcaaggtcgccggcgaggtgacctggcgggtg
ccgccgttggccgttgacgacgcgatcgcattgttcaccgatcgcgctcgcctggcccaa
cccgatttcgccctcaccgatgacaacgcggggaccgtgagccagatctgccgacggctg
gatacccagccgctgggcatcgagctggcggcggcgcgggtacggacgctgtcattggcc
gagatctctgcgggcctggacgacaagattcggctgctcaccggcggcgcgcgtaccgcc
gtcccgcgccagcagaccctgcgggcatcactcgagtggtcccacggtctgctcaccgat
accgaacgagtgttgtttcgccgcctcggtgtgttcgttggcggattcgacctgcaagcg
gcgcaagcggtggccgccttcggcgacgtgcacccccgcgacgtgctcggcgatttgtcg
cagctggtcgataaatcgctggtggtagccgacagctcgaacggcagaacgcgctatcgg
cggttcgagggggtaggccagctggccttggagaagctgcgtgcggccggcgaggccgat
atcgcgcgtgcgcgtcattgtgaccattacacggctgtggtcgccccgttggatcgaccc
gcgcgagccgactatgacttcctgctggcgcgggtcgagggcgaactagagaatctgcgc
gccgcgtcggcgtggttgttggagagctccgatggtgaatcggcgctgatgctggcgtcg
cggctgcagccgctgtggttggtccggggcctgatcagcgagggacgcagctggtttgat
gcggccctggccggcgcgagcgtgctcgaggtcagcccgacggtgcgggcccgggcgctt
gccgacgcggccgtgctgacgatgttcgtcgacgtcgcaacaagtctggaaagcgccgcc
gcggcgttggcgatcgcacgtgagctcgatgacccggcctcgttggtccgggcactgacc
gcctgcggattgaccgcgagcttcagccatcacaccgaagcggtggggcagtattttgcc
gaggcggccagcttggctgaggaattggacaatcagtggggcctgagccagattctgagc
tggcagagcaatgcggcggtggtggccggtgacgcgattgcggcacggcgaatcggtacc
gaaggacgcgatcttgcggatgcgatcggggaccggttcaattcgtggctgtgtcggctc
agcttgggatacgcgcaactctggcagggcgacttgaccggtgccaccacacaattcggt
gcgctgtccgaagcggaaaaccttgcttctttgagctctaaggggctcggcgacgcgctg
gcctatcgcggcgacgtcgacgcggccaggacggcggccgaggcggcgctggagcgtgcc
gccgagtcgagcgaatatgctctgggactgggctattcgacggtggcgctggcggcgctg
gccggtggtgacgtcgaaacggcgcgcaacgctagcgacctagcctggcacaagctgagt
gcgcagccctacgcggcgatgttctggcacagcttccgggccgagatcgcccttgcctgt
ggaaacgtggccggggccaagcgctgcgccgatgaggccgtctcggtgacgacggggtgg
caccgtgcgctggcgctgaccacccgcgcccgggtggcgatggccgagggcgagccggaa
caagccgaacgtgcggcttacgaagcgctcacgtgcgcggctgacgtcggggcgcgcacc
tgcctgccggatatcctcgagtgcctcggcgcgctcgccgccgatcagggcagagatcgc
gaggcggctcgcgtgtacggcgcggccgagggcatccgacagcgcatcggcgcgatgcgg
ttcaagatctatgacgccggctatcagaagtcggtagccgccttgcacgccacgatgagc
accgacgaattcgacaccgcctgggcccacggcgccgcattctccgccgaggaagcgatc
gactacctccaacacggccgcggcgaaggaaagcgggcgacaagcggctgggcggccctg
acccgagccgaactcaacgttgtacgtcttgtggggcaaggtctttccaacaaggacatc
gcccagcggctgtttctctcgccgcgcacggtgcagacgcacctcacccacgtctacacc
aaactcggcttcaactcccgcgtccaactcgctcagcaagcggcgcagcattcctag
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