Mycobacterium simiae: MSIM_15410
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Entry
MSIM_15410 CDS
T07396
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
msim
Mycobacterium simiae
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msim03021
]
MSIM_15410
Transcription machinery [BR:
msim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MSIM_15410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
DUF6456
Motif
Other DBs
NCBI-ProteinID:
BBX40090
UniProt:
A0A7I7KD81
LinkDB
All DBs
Position
complement(1665047..1665610)
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AA seq
187 aa
AA seq
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MTPHNHPTDDPPGPRPLRAVPDSRHDDGYADWAAVYQDNAAWVYRTLFARVGNRADAEDL
TAEVFLAALRPLRLTASVGEVRSYLRATARTVLAAHWRETMGREITSIEDIEQPPDSPDA
ISTAPARVARVLQTLPDRYRQILELRFLQGNSIKDSAVELGISVANAKVLQHRALRLAAQ
VNDGGPS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccacacaaccacccaaccgatgacccgccgggcccgcggccattgcgtgcggtg
cccgacagccgtcacgatgacggctacgccgactgggcggcggtgtatcaggacaacgcg
gcctgggtgtaccgaacgctgtttgcccgggtgggtaatcgggccgacgccgaggacctc
accgccgaggtgttcctggccgcgctgcggccgctgcggctgaccgccagcgtcggcgag
gtgcggtcctacctacgggccaccgcgcgcacggtgctggccgcgcattggcgcgagacg
atgggtcgcgaaatcacctcgatcgaggacatcgagcaaccgcccgacagtccggacgcg
atcagtaccgccccggcgcgggtggcccgggtgctgcaaaccctcccggaccgctatcgt
cagatcttggaattgcgtttcctgcagggtaattcgatcaaagactccgccgtggagctg
ggcatcagcgttgccaatgccaaagtgctgcagcatcgtgctctgcgactggcggcgcag
gtcaacgatgggggcccgtcatga
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