Magnolia sinica: 131242968
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Entry
131242968 CDS
T09699
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
msin
Magnolia sinica
Pathway
msin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131242968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131242968
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
131242968
BRITE hierarchy
Motif
Pfam:
Clathrin
WD40
ANAPC4_WD40
WD40_like
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
131242968
NCBI-ProteinID:
XP_058097966
LinkDB
All DBs
Position
4:31749825..31802114
Genome browser
AA seq
956 aa
AA seq
DB search
MARNPNENGVEGDDEREEEEEEEEEDEEEEEEDEPRLKYQRMGGSISSLLSNDAASCISV
AERMIALGTHDGTVHILDFLGNQVKEFSAHTATVNDLSFDIEGEYIGSCSDDGHVVINSL
FTDEKLKFEYHRPMKAIALDPEFSRISSRRFVAGGLAGHLFLNSKKWLGYRDQVLHSGEG
PIHTVKWRTNLIAWANDSGVKVYDMANDQRITFIERPRGSPRPELLLPHLVWQDDALLVI
GWGTSVKIAAIRSNVSGGVNGRANGIQRTISISSAKHVDIVASFQTSYFISGIAPYGDSL
VVLAYIPEEENGEKEFSSTVPSRQGTAQRPEVRIVTWKNEELAMDALPIHGFEHYKAKDY
ALAHAPFTGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHISWLLQHGWHEKALAA
VEAGQGRTELLDEVGSRYLDHLILERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLP
VLVPYIPTEHPRLRDTAYEVALVALATNPAFHKDLLSTVKSWPREIYSALPVISAIEPQL
NTSSMTDNLKEALAELYVINTQYEKALALYADVSTPLLMKPEIFDFIEKHGLHEAIHDKV
VQLMILDCKRAVPLLIQHRDLITPSEVVSQLLSASKKCDHRYFLHLYLHYLFEANPNAGK
EFHDLQVDLYADYEPQMLLPFLRSSQHYKLEKAYEICVKKDLLREQVFILGRMGNSKKAL
AVIINKLEDIAEAIEFVTTQHDDELWEDLIKQCLRKPEMVGILLEHTVGNLDPLYIVNMV
PNGLQIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARHAVLLGIEED
EARGKRDDSSTQASERAASSGNLEVNSRTKGGGRCCMCFDPLSIQNLSVIVFFCCHAYHI
TCLTGSSDSNGVGAGRGVQASSRRPLPDYDDDDDVDDNVGSGGSRMRCILCTTAAA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaaatcctaacgaaaatggcgttgaaggcgacgatgaaagagaggaagaagag
gaggaagaagaagaggatgaggaagaagaagaagaagacgagccgaggctgaaataccag
aggatgggaggcagcatctcttccctcctatccaacgacgctgcttcctgcatctccgtc
gcggagcgtatgatcgccctcggcacccacgatggcaccgtccacatcctcgatttcctt
ggcaatcaggttaaggaattttcagctcacaccgctactgtcaatgaccttagctttgat
atcgagggcgaatatataggaagctgctcagatgatggacatgttgttataaacagcctt
tttactgatgagaaattgaagtttgaatatcatcgcccaatgaaggccattgctctagat
ccagaattttcaagaatatcatcacgtagattcgttgcgggtggtttggcaggccatctt
tttctgaattcaaagaaatggctgggctatcgtgaccaggttttacactcaggagaaggt
ccaatacatacggtgaagtggagaacaaaccttattgcttgggctaatgattcaggtgtt
aaagtttatgacatggcaaatgatcaacgcatcacatttattgagaggccgcgagggagc
ccacgccctgaacttctgctgcctcacttagtttggcaggatgatgctctcttggttatt
ggctggggaacgtcagttaaaattgctgcaattagatcaaatgtatctggaggggttaac
ggaagggccaatggaatacaaaggaccatctcgatatcaagtgcaaagcatgtggatatt
gtggcctcttttcagaccagctatttcatttcaggaattgctccttatggggattcttta
gttgttcttgcctatattcctgaggaagagaatggagagaaggaatttagcagtacagtt
ccatctcgccagggaactgcacagaggccagaagtgcgcatagtcacatggaaaaatgaa
gaactcgcaatggatgctcttcccatacatggctttgaacattacaaggcaaaggattat
gcccttgctcatgctccttttacaggtagcagctatgcaggtggtcagtgggctgctggt
gatgaacctttgtattacatagtatctcctaaggacgtggtcattgcaaagcctagggat
gctgaagatcacatttcttggcttcttcaacatggttggcatgaaaaagccctggccgct
gttgaagcaggacaaggacgaactgaacttcttgatgaggttggatcgagataccttgat
catttgattttggaaaggaagtacgctgaagcagcatctctgtgtcccaagttgttgcgc
ggatctgcttcagcatgggagagatgggttttccactttgctcatctccgccagcttccc
gtgttggttccatatatacctacagaacatccaaggttgcgggatactgcttatgaggtg
gctcttgtggctcttgcaactaatccagcttttcacaaggacctcttgtcaactgttaaa
tcttggccacgggagatatattctgccttgcctgttatttccgcaattgaaccccagctt
aatacttcctcaatgacagataacctgaaagaggcattagctgagttgtatgtgatcaac
acacagtatgagaaagcacttgcattatatgctgatgtaagtaccccactgctgatgaag
cctgagatattcgacttcattgaaaaacatggtttacatgaggccattcatgataaggtt
gtccaactgatgatactggactgcaaacgagcagttcctctattgatccaacacagggat
ttaattactccatctgaggtagtttctcaactgttgagtgccagtaaaaagtgtgatcat
agatatttcttgcatctatatctgcattatctatttgaagccaacccgaatgctgggaag
gaatttcacgatttgcaggtagatctctatgctgactacgaaccacagatgctgcttcct
tttctgcgtagcagtcagcattataaacttgagaaggcatatgaaatttgtgttaaaaaa
gatcttctgcgagagcaggtcttcatccttggaaggatggggaattccaaaaaagcactg
gctgtcatcataaacaagctagaggatatagcggaggctatagagttcgtgacgacgcaa
catgatgatgagctatgggaggatctaattaaacagtgtctccgtaaacctgaaatggta
ggcatattgttggagcacactgttggaaatctcgatccactttatattgttaatatggtg
cccaatggattacagataccaaggcttagggaccgtcttgtcaagataataacagattac
cggacagaaacttcccttagacatggatgcaatgatatactcaaggccgactgtgtaaat
cttttggtgaaatactacaaggaggcccggcacgcggtccttttgggcattgaagaagat
gaagcgcgtgggaagagggatgacagtagtactcaggcatctgagagagcagccagctca
ggaaatttggaggtcaattcgagaaccaagggtggtggaaggtgttgcatgtgcttcgat
ccgctttcgattcaaaacctctcagtcattgtattcttctgttgccatgcttatcacatc
acatgcctcaccggctcctctgattcgaatggggttggtgccggcagaggggttcaagcc
tcttctcgacggcctttaccggattatgatgatgatgacgacgtggatgataatgttggg
tctggtgggtcccggatgcgttgtattttatgtactacagccgctgcataa
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