Methylocella silvestris: Msil_0311
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Entry
Msil_0311 CDS
T00802
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
msl
Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msl03009
]
Msil_0311
03016 Transfer RNA biogenesis [BR:
msl03016
]
Msil_0311
Enzymes [BR:
msl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Msil_0311
5.4.99.29 23S rRNA pseudouridine746 synthase
Msil_0311
Ribosome biogenesis [BR:
msl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Msil_0311
Transfer RNA biogenesis [BR:
msl03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Msil_0311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACK49290
UniProt:
B8EQL9
LinkDB
All DBs
Position
350703..351407
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AA seq
234 aa
AA seq
DB search
MDEAPSPLSEAELNARLLYRDGLMLVIDKPAGVAVHRGPKGGANLEAAFHWLRFGLPRSP
ALAHRLDRDTSGCLVLGRHHKALEKLGLLFKQGKIGKTYVSIVNGRPGAEEGLIDLPLGR
RDETRGWWMKVDPAGQSSQTRWRILAKGPAHTLLALTPLTGRTHQLRVHCAAMGFSILGD
PIYGEGGAIPLQLHAQKIEIPLYKNKDAVRVEAPIPESFRAALESCGMAGAEFG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttggacgaagctccgtcgcccctctcggaggcggagcttaacgccaggctgctgtatcgc
gatggcctgatgctcgtgatcgataaaccggccggcgtagccgttcatcgcgggccgaag
ggcggagccaatctcgaggccgccttccactggctgcgtttcggcctgccgcgcagtccg
gcgttggctcaccggctcgatcgcgacacctccggctgtctcgtgctcggccggcatcac
aaggcgctcgaaaaactcgggcttttgttcaagcagggcaagatcggcaagacctatgtc
tccatcgtcaacggacgccccggcgcggaggaggggctgatcgaccttccgctcgggcgc
cgcgacgagacccggggctggtggatgaaagtcgatcccgccgggcagtcctcgcaaacg
cgctggcgcatccttgccaagggcccggcccacacgctgctcgcgctgacgccgctcaca
gggcgcacgcatcagcttcgcgtgcattgcgcggcgatgggcttttcgatccttggcgat
ccgatctacggcgaaggcggcgcgatcccgctgcagctccacgcgcaaaaaatcgagatc
ccgctctataagaacaaggacgctgtgcgcgtcgaagcgccgatcccggagtcttttcgc
gcagcgcttgaaagctgcggcatggcgggagccgaattcggatag
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