Methylocella silvestris: Msil_1646
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Entry
Msil_1646 CDS
T00802
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
msl
Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msl03000
]
Msil_1646
Transcription factors [BR:
msl03000
]
Prokaryotic type
Helix-turn-helix
Other families
Msil_1646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
PAS_8
AAA_5
AAA_2
HTH_50
AAA
Mg_chelatase
HTH_7
HTH_30
HTH_28
Xre-like-HTH
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ACK50594
UniProt:
B8EK54
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Position
complement(1778382..1780451)
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AA seq
689 aa
AA seq
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MDFGQLNEWAPPEAGADPAQERVIMKAWEDYLSGVSHRLKVRNVVAKSWQRCAAIGIDHK
VAGSRTIVAQREFEQRLRANSLLLQAASKVFSEAQQTLTGTGSMLILTDVDAVVLDAVGD
PGTLEAGRDINLVIGADWSEANAGTNGIGTTLASRSPVLIHGAEHFCALTKNWTCVGAPV
RNPLDGSLLGLVDMSGAKNTFQQHNLAFAVMVAGRIEAALSLQLEGERRMLMEYSSAMGR
GWSDGVIVCDRGGRIVSANEHAYRLLARRGESRDGVEMGFQSDQPLLKLSNDGRSFDLAA
AARYGISQDNLLPVHHDESLIGAVVIAAAATRPLAPAIKRANAFDPIVTKCAAMLDIVHR
ARRLAVYHAPVLIEGETGVGKELFARAVHDASPCADGPFVAFNCGAVSRELIATELFGYV
KGAFTGASANGALGRFERANNGTLCLDEIGELPLDLQPFLLRVLEEGTVCRVGDTTPRPI
KVRLIAMTNRDLREEVEKGRFRRDLLYRLNVSTLKVPPLRKRDGDAVLLAQHFVDYLSKK
HNLGLRRFAPDVLRLFKTYPWPGNIRELRNVVESALLLCDTPIIGRGWLPDEILDYRPPD
TERAATPIAVARSGPAAGQSSCEPNSASDLRSLDKQHIERVLERYQGNISLSAAALGIAR
TTLYRRLRAYGLDAPRDGEAVSETDQVSD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggattttggtcagttgaatgaatgggcgcctcccgaggcgggagcggatccagcgcag
gagcgcgtcattatgaaggcgtgggaagattatctttccggcgtctcccatcgcctcaag
gtgcgcaatgtcgtcgcgaaatcctggcagcgttgcgctgccatcggcattgaccacaaa
gtcgcgggatcgcgaaccatcgtcgcgcaacgcgaattcgagcagaggctgcgcgccaac
agcctgctgctgcaagcagcgtcgaaggtcttttcggaagcgcagcaaacgctgaccgga
acgggctccatgctcattctgactgacgtcgacgctgttgttcttgacgccgtcggagat
ccgggcaccctcgaagcgggccgggacatcaatctggtcatcggcgccgattggagcgag
gccaacgctggaacaaatggcatcggcaccacgctggcctcgcgctcgccggtgctgatt
catggcgctgagcatttctgcgccctgaccaagaactggacctgcgttggcgctccggtg
cgcaacccgctcgatggctccctcctgggcctcgtcgacatgtccggggcgaagaacacg
tttcagcagcataatctcgccttcgccgtgatggtcgccggtcgaattgaagcagcgctt
tcgcttcagctcgaaggcgagcggcgcatgctcatggaatacagctcggccatgggccgc
ggatggtccgacggagtgatcgtctgcgatcgcggcggcaggatcgtctcggccaacgaa
cacgcctatcgtttgctggcgcggcgcggcgagtcgcgggacggagtggagatgggtttc
cagtccgatcaaccgttgttgaagctgagcaatgacggaagaagtttcgacctggcggcc
gccgcccgttacggcatcagccaggacaatctgcttcctgtccatcacgatgagtccctc
atcggcgcagtggtgatcgcagccgccgcgacgcggccgttggctccggccatcaaacgc
gcgaacgcattcgatccgatcgtcaccaaatgcgccgccatgctcgatatcgtccatcgg
gcccgccgtcttgccgtctatcacgcgccggtgctgatcgagggagagacgggggtcggc
aaggagctgttcgcccgggcggtgcatgacgccagcccttgcgccgacggacctttcgtc
gcgttcaattgcggcgccgtctcacgcgagttgatcgccaccgagctttttggctacgtc
aagggcgcctttacgggcgcgtccgcgaatggcgccctcgggcgattcgagcgcgccaac
aatgggacgctctgtctcgacgaaattggcgaactgccgcttgatctgcaaccttttctt
ttacgtgtcctcgaagagggaacggtatgccgcgtcggcgacacgactcctcgtccgata
aaagtccgtctcatcgcgatgaccaaccgcgaccttcgcgaggaagtggaaaagggccgt
tttcgtcgtgatcttctctacagactgaatgtctcgacgctgaaggttccgccgctgcgc
aaacgcgacggcgacgccgtattgctcgcgcagcattttgtcgattatctatcgaaaaag
cataatctcggcctgaggcgcttcgcgccggatgtcttgcgcctgttcaagacctatcca
tggccaggcaacattcgcgaacttcgcaatgtcgtcgaaagcgcgcttttgctgtgcgac
acgccgattatcgggcgcggatggcttcctgacgagattttggattatcgccctccggat
acggaacgcgccgcgacgccgatcgccgtcgcgcggtccgggccggcagccggccagtcc
agctgcgagccaaattccgcgagtgatttacgcagcctcgacaaacagcacatcgagcgc
gtgctggagcgttatcagggcaacatcagcttgagcgccgccgccctcggcatcgcgcgc
acaacgctatatcgccgtctgcgcgcctatgggctcgacgcgccgcgcgacggcgaagct
gtttcggagacagatcaggtttccgattag
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