Mycolicibacterium smegmatis INHR1: LI99_05945
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Entry
LI99_05945 CDS
T03409
Name
(GenBank) RNA-binding protein
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
msn
Mycolicibacterium smegmatis INHR1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TROVE
DUF5308
Motif
Other DBs
NCBI-ProteinID:
AIU13065
UniProt:
A0A653FGF2
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Position
1259604..1261298
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AA seq
564 aa
AA seq
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MDILKTIRLRQTPQAPAATPGQVRNAAGGYTFPVDDWARVHRFLTLGTDGGTYYTADREL
TRDNAEVVLRVAATDPVGLVNRIVEVSEAGRAPKANPALFALAIAASSEDVDGRRAALAA
LPRVARTATHLFLFAGYVEQFRGWGPTLRRAVSRWYTERPVDALAYQLVKYRQRGGWSHR
DMLRLARPSGVVDPARRMAFNWAAGKGLGDYAEAPARLTDVELKVGQRTAVRPPVRAEVV
PDELAIIADFEDAQAASAAARWIEIIGRGHGLSWEMLPDAALAQPAVWEALIDRGMPQTA
LMRQLPRLTRLGVLSGAVGDTVAEQLADRDRLVKARVHPVNVLVAQRTYTRGCGARGQAV
WTPVAKISDALDAAFYAAYGAVRPAYKRTLLALDVSGSMGSQVSGLPISCREAAAALAMV
TAATEPAHRIIGFTAGRGGHAQRAVSELDISPRRRLDDVCRYTADLPFGATDCALPMMWA
LRRGVKVDTFHIYTDNETWYGSIHPHQALAEYRHKMGIDARLVVVAMTASGNSIADPADP
RQLDISGFDSAVPTLLADFSRGDI
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggacatcctcaagaccattcgcctgcgtcagacgccgcaggccccggccgcaacgccg
gggcaggtgcgcaacgcggcgggcgggtacacctttccggtcgatgactgggcccgggta
caccgcttcctgacgctgggcaccgacggcggcacgtactacacggccgaccgtgagctc
acgcgcgacaacgccgaggtcgtactgcgtgttgccgcaaccgatcccgtcggtctggtg
aaccggatcgtcgaggtgtcggaggccggtcgcgcgccgaaggccaacccggcgctgttc
gcgctggccatcgccgcctcatcggaggatgtcgacggccggcgtgccgcgctggccgcg
ctgccccgggtcgcccgcacggcaactcacctgttcctgttcgccggttacgtcgagcag
ttccgcgggtgggggccgacgctgcgtcgcgccgtatcccgttggtacaccgagcgtccc
gtcgatgcgctggcctaccagctggtgaagtaccggcagcgcggcgggtggagccaccgt
gacatgctgcggctggcccgcccgtccggtgtggtcgatccggcccggcgcatggcgttc
aactgggcggcaggaaagggtctgggcgactacgccgaggcccctgcccggctcaccgac
gtcgagctgaaggtgggacagcgcaccgctgtccggccgccggtgcgcgccgaggtggtg
cccgacgagctcgcgatcatcgccgatttcgaggacgcccaggcggcctcggccgccgcg
cggtggatcgagatcatcggtcgtggccacgggctgtcgtgggagatgctgcccgacgcg
gcgctggcgcagccggcggtgtgggaggcgctgatcgaccgcggcatgccgcagacggcg
ctgatgcgtcagctgccccgcctgacccggctgggtgtgctgtcaggtgccgtcggggac
accgtcgccgagcagctcgccgaccgtgaccggctggtcaaggcccgcgtgcacccggtg
aatgtccttgtggcgcagcgtacctacactcgcggctgcggtgcccgcggccaggcggtg
tggacgcccgtcgcgaagatctccgatgcgctcgacgctgcgttttacgcggcctacggc
gcggtacgtccggcatacaagcgcacgctgctggcgctggacgtctcggggtcgatgggc
tcgcaggtgtcgggtcttccgatctcgtgtcgggaggcagcggcggcgctggccatggtg
accgcggcgaccgagcctgcgcaccgcatcatcgggttcaccgcgggacgcggtgggcac
gcccagcgcgcggtgagcgagctggacatcagcccgcgccgacggctcgacgacgtgtgc
cgctacacggcggacctgccgttcggtgccaccgactgcgcgctgccgatgatgtgggcg
ctgcggcgcggggtgaaggtggacacgttccacatctacaccgacaacgagacctggtac
ggaagcatccatccgcaccaggcgctggccgagtaccggcacaagatgggcatcgatgcc
cggctggtcgtcgttgcgatgaccgcgtccgggaactcgatcgccgatccggccgatccg
cgccagctcgacatctccgggttcgactcggcggtgccgactctgctcgccgatttctca
cgcggcgacatctag
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