Mycoplasmopsis synoviae ATCC 25204: VY93_03375
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Entry
VY93_03375 CDS
T04518
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mso
Mycoplasmopsis synoviae ATCC 25204
Pathway
mso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VY93_03375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mso03400
]
VY93_03375
Enzymes [BR:
mso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VY93_03375
DNA repair and recombination proteins [BR:
mso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VY93_03375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
SH3_13
AAA_11
PIF1
AAA_22
UvrD-helicase
nSTAND3
SLFN-g3_helicase
NACHT
AAA_16
DEAD
AAA_12
RNA_helicase
PhoH
DUF815
AAA_14
NTPase_1
RsgA_GTPase
Helicase_RecD
MCM
AAA_5
AAA_7
Zeta_toxin
bpMoxR
TniB
AAA_28
AAA_18
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AKB11334
UniProt:
A0A8D3YIF5
LinkDB
All DBs
Position
complement(765600..767822)
Genome browser
AA seq
740 aa
AA seq
DB search
MKDITQLVGKFTKIKAGGPEVGWGLYIFQSTDSLLRNCMVYITKKSVGSMPTLFRNYKID
LVNNSNPNYKNSSKTLVAFTEFYEDQLTQEEKNKLLETILLKVKNLGKVKIERIIKNFGF
DIFKHHSDIDALKEQTKDILTNLQIESLYEYFQNHLDLIKSSFLNSKEISNFDIFIEQNK
LSDLKEFLVKKHPSNFDFLKHYKVSDPYVWYNRNEFDNFALLDYFALKLNWGMSCDERIN
ALTKFCFLELITNNSTMVELRLLNSKIKEFIHEENSYWNGYPEDKNELEKTFKVVREIDG
KIYVALSIIYDKEKKIASFLKMLNSLNPIVLDSLPDSETKTLSEGQKSAYESFLKNNITI
ISGAPGTGKSHIIKHIHNTLKQNKYKNQKEYAILAPTGKASLSVSEKINAKVSTIHSFLQ
IEPSSEHTIKVKQINTEVKFLIIDEFSMVNTYIFNLLIRACPNLIKLVLVGDVDQLPAIG
PGNLLSDIVESKLFNVFYLDKYFRSDSIEIFNHFNSIKTNSPPNFKDGIINYIKYLDSKY
LSSVVDLFCEIAKESGLDNLMLLSPMKVGDKGLDAINKKIQDLINPDSELVYSTKFGNKF
KINDRVIQQENRLDDDVYNGDIGFIRKKIGTKTQDIKILVEFKNNKLIKYPLNEFLSQIK
LAYGITVHKFQGSEIDNVIFAFADTHKRMLYKKLIYTGLSRAKKQIWIVTNNKIDYPNLI
KEIQNETPIYTNLKYILKGK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatataacccagcttgttggaaaatttacaaagattaaagccggtggcccagaa
gtcggatgagggctatatattttccaatcaactgattcgctattgcgtaactgcatggtt
tatataaccaaaaaaagtgttggttcaatgccaacattatttagaaactacaaaattgat
ttagtaaataattcaaatccaaattacaaaaattcttcaaaaacattagtagcatttaca
gaattctacgaagatcaattaactcaagaagaaaaaaacaaacttcttgaaactattttg
cttaaagttaaaaatttaggtaaagtaaaaatcgaaagaattattaaaaattttggtttt
gatatttttaagcatcatagtgacatagatgctttaaaagaacaaaccaaagatattctt
acaaatctgcaaattgaaagcctttatgagtattttcaaaatcatttagatttaattaaa
agttcatttttaaacagcaaagaaattagtaactttgatatttttatcgaacaaaataaa
ttaagtgaccttaaagaatttttagttaaaaaacacccttctaattttgattttttaaag
cattataaagttagcgatccttatgtttgatacaacagaaatgaatttgataactttgcg
cttcttgattattttgctcttaaattaaattgaggaatgtcttgcgatgaaagaattaat
gcgctaactaaattttgttttttagaactaattactaacaattcaaccatggttgaattg
cgtttattaaattctaaaatcaaagaatttattcacgaagaaaattcttattgaaatggt
tatccagaagacaaaaatgaactagaaaaaacctttaaagttgttagagaaattgatggc
aaaatttatgttgctttaagcattatttatgacaaagaaaaaaagattgccagcttttta
aaaatgcttaattcactaaatcctattgttttagattcacttcctgatagtgaaactaag
actttgtctgagggacaaaaaagtgcatatgaaagctttcttaaaaacaatataaccatt
atttcaggagcacctggaaccggtaaaagtcacatcattaaacatattcacaacacctta
aaacaaaacaaatataaaaaccaaaaagaatatgcaattttagctcctactggaaaagct
agcctttcagtttctgaaaaaataaacgccaaagtttcaactattcattcgtttctgcaa
atcgaaccaagtagcgaacacactattaaagtaaaacaaattaacactgaagttaagttt
ttaatcattgacgaattttcaatggttaatacttatatttttaatttattaattagagct
tgtcctaatttaataaaactagttttagtaggtgatgttgatcagcttcctgcaatagga
cctggtaatttactttcagatattgttgaaagtaaattatttaatgtgttttatttagat
aaatattttagaagtgattcaattgaaatttttaatcactttaattcaattaaaactaat
tcgccgcctaattttaaagacggaataattaattacattaaatatttagattcaaaatat
ttatcaagtgtagttgatttattttgtgaaatagctaaagaatcaggccttgataattta
atgctactatctccaatgaaggttggcgataaaggtcttgatgcaattaataaaaaaatt
caagatttaattaatcctgattctgaattagtttatagcactaagtttggaaataaattt
aaaatcaacgatagagttattcaacaagaaaatagactcgatgatgacgtatataatgga
gatattggttttattagaaaaaaaatcggaaccaaaactcaagatattaaaatattagta
gaatttaaaaacaataaattaattaaatatccattaaatgaatttctatctcagataaag
ttggcttatggaattactgttcataaatttcaaggttctgaaattgataacgtaattttt
gcatttgcagatactcacaaaagaatgctttataaaaagttaatttatacagggctttcc
agagctaaaaaacaaatttgaatagttactaataataaaattgattatccaaatttaata
aaagaaattcaaaatgaaactccaatttatactaatttaaaatacattctaaaaggaaaa
taa
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