Mesobacillus subterraneus: LC048_04685
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Entry
LC048_04685 CDS
T09285
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
msut
Mesobacillus subterraneus
Pathway
msut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LC048_04685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msut03400
]
LC048_04685
Enzymes [BR:
msut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LC048_04685
DNA repair and recombination proteins [BR:
msut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC048_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_22
DEAD
AAA
AAA_12
nSTAND3
Zeta_toxin
NTPase_1
AAA_28
AAA_16
AAA_18
T2SSE
TsaE
AAA_17
TBPIP
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WLR56233
LinkDB
All DBs
Position
954423..956873
Genome browser
AA seq
816 aa
AA seq
DB search
MDKQDSLDLFSEQGKFMKGKHLVTIFHNEQNLYTVLRIRVEETNEQYEDKEAVITGYFPR
IHEQETYIFFGEVKEHPKFGAQFHATHFRKDLPQSKQGIISYLSGDLFKGIGKKTAEKIV
DTLGEKTITRIIENPSVLDQIPKLAPEKAKELYDTLMEHQGLEQVMVALNEYGFGPQLSM
KIYQVYKEQAIDVIQNNPYKLVEDIEGIGFGRADELGSQLGLTGNHPDRIKAACLYTLEN
SSIQGGHVFMEAENLLVEVKKLLEDNQNVEIVFTDISKEIIKLGEEGKLVAEEQRVYLPS
LYYSEKGLVVNIKRILEQTEYENQFPESEFLLALGNLEERLGVQYGPSQKEAIQTALMSP
MMILTGGPGTGKTTVIKGIVELYAELHGCSLDPKDYKKEEPYPFLLAAPTGRAAKRMTES
TGLPAVTIHRLLRWNGAEGFDHNEDQPLEGKILIIDETSMVDIWLAHQLFKSLPDNIQVI
VVGDEDQLPSVGPGQVLKDLLDSGRVPTVRLTDIYRQAEGSSIIELAHQIKKGFLPEDIS
AQQPDRSFIKCTTSQIPQVVEKVVANAKNKGYSPRSIQVLAPMYRGPAGIDRLNELLQDL
FNPNSDGTRKELAFGDVKYRIGDKVLQLVNQPEANVFNGDMGEVVAIFYAKENTEKQDQL
IVSFDGIEVTYNRADLSQITHAYCCSVHKSQGSEFPIVVLPVVKSYFRMLRRNLIYTAIT
RSKQFLILVGEEEALKMGIERGEDTERNTTLVEKLVLLLPELQDETGTKEHSECKHQNHE
DNIKVEKMNYIEIIKNADPMIGMDNLTPYDFMEEGS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
ttggacaaacaggactcgcttgatttgttttcagaacaaggcaagttcatgaaagggaag
catcttgttaccatttttcataatgaacagaatctatacacagtccttaggatcagggtt
gaggaaacaaatgagcagtacgaggataaggaagcagtcattacagggtatttcccccgg
attcatgagcaggagacttatattttctttggtgaggtaaaagaacatcctaagttcggt
gcacaattccatgcgactcatttccggaaagacttgccgcagtcaaagcaggggatcatc
agctacctttccggtgaccttttcaaaggaatcgggaagaaaacagctgagaaaatcgtt
gatacactgggtgaaaagaccatcacaaggattatcgagaacccgtctgtccttgaccag
attccgaagctggcacctgaaaaagcaaaggaactttatgacacattgatggagcatcag
ggcctcgaacaagtgatggtcgcattgaatgaatatggctttggtcctcagctgtcgatg
aaaatttatcaagtttacaaggaacaggcgattgatgtaattcagaacaatccgtacaag
cttgtggaggatatcgaaggcatcggtttcgggagggcggatgaactgggcagccagctc
ggtttaactggtaaccatcctgaccggatcaaggcagcctgtctctatacacttgaaaat
tcaagcatacagggcggtcatgttttcatggaagcagaaaaccttctcgtcgaagtgaaa
aagcttctagaagacaatcaaaatgttgaaattgtatttactgatatctcaaaggaaatc
atcaagctcggtgaagaaggaaagctggttgctgaagaacagagagtctatttgccatct
ctctattattcggaaaagggcctggttgtgaacattaaaagaatccttgaacagacagaa
tacgaaaatcaatttcctgaatcggagtttctcctagcgctcggaaatcttgaggagcgc
cttggtgtccaatatgggccaagccagaaggaagcgattcagacagcgcttatgtcaccg
atgatgattctgaccggtgggcccggcacaggtaaaacgacggtcattaaaggaattgtt
gagctatatgcagagctacatggctgttcacttgacccgaaagattataaaaaagaagaa
ccttatccgttcttgcttgcggcgccgactggtcgtgcggcaaagaggatgactgagtca
acaggtcttcctgccgtgaccattcataggcttttgcgctggaatggcgcagaaggtttt
gaccataatgaagaccagccgcttgagggaaagatattgattattgatgaaacctcaatg
gttgatatatggctcgcccatcaattattcaaatctctgcctgacaatattcaggtgatc
gttgtaggagatgaagaccagcttccttcagtaggtcctggccaggtactgaaggatcta
cttgattccggcagggtcccgactgttaggctgacggatatataccgacaggctgaagga
tcatcaataatcgaacttgctcatcaaatcaaaaaaggctttctgccagaagatatttct
gctcagcagcctgaccgttcttttataaaatgtacgacaagccagattcctcaggtagtc
gaaaaggttgtcgccaatgctaagaataaagggtattctcctaggagcatccaggtgctg
gcaccaatgtaccgtggtccagccggcattgaccggttgaacgagctgctgcaggatctc
ttcaatcctaattctgatggaacgagaaaagagcttgcatttggcgatgtgaagtatcgt
atcggggataaggtccttcagctggtaaatcagccggaagccaatgtgttcaatggtgac
atgggtgaggttgtcgcgatcttttacgcgaaggaaaacaccgaaaagcaagatcagctg
attgtgtcctttgatggcatagaagttacatataatagggcagacctctcgcaaatcacc
cacgcttattgctgttccgtgcataaatcccagggtagtgaatttccgattgtcgtcctt
ccagtagtgaaaagctacttcagaatgctgcgcaggaatctgatttataccgcaatcacc
aggagcaagcaattcctgattcttgttggtgaagaagaagcactgaagatggggatcgaa
cgcggtgaagataccgaaaggaatacaactcttgtagaaaagcttgttctattgctgccc
gaattgcaggatgaaacgggtacaaaggaacattcggagtgtaagcaccaaaatcatgaa
gataacatcaaagttgaaaaaatgaattatattgaaattattaaaaacgctgatccgatg
attggaatggacaatctgactccttatgattttatggaggaaggtagttag
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