Methanosarcina siciliae T4/M: MSSIT_0782
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Entry
MSSIT_0782 CDS
T03865
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSSIT_0782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msw02000
]
MSSIT_0782
Transporters [BR:
msw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSSIT_0782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
ResIII
AAA_5
SLFN-g3_helicase
NACHT
Motif
Other DBs
NCBI-ProteinID:
AKB27501
UniProt:
A0A0E3L7W9
LinkDB
All DBs
Position
complement(936510..937451)
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AA seq
313 aa
AA seq
DB search
MTLLSIRDLRTYFYTEDGVVRAVNGIDLNLEEGETLGIIGETGCGKTMLGLSILRLLSEN
TKVEGQVLYRGTDLIRLSKAQMRKIRGKEISMIFQNSLSSLNPVLTVGTQLAEPVKMHRH
MKNQAAKQRVIELLKAVKIPSPSERAAEYPHEFSGGMRQRAMIAMGLACTPSLIIADEPT
TGLDVTIQAQIVELLKEVLEQSGASMLLITHDLGVASELCDSIAVMYAGEIIEYAGVIDL
FKNPGHPYTRGFFDSLPNRGLKPMPGTCPSMINLPAGCKFHPRCPHASSRCEKEKPDMLK
VGEKHYVRCFLHD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacattattgagcatacgggacctgagaacctatttttataccgaagacggcgtggtc
agggcagtaaacggtattgacctgaatcttgaagaaggggaaaccctcggaataatagga
gagaccggatgcggaaaaaccatgctggggttatcgatactgcgtttgctttctgaaaat
acaaaagtggaggggcaggtcctttacaggggaaccgacctgatccggctcagcaaggct
caaatgcgaaagataaggggaaaagaaataagcatgatctttcagaattctctttcttcc
ctgaaccctgtgctcactgtgggaacgcagcttgccgaacccgtaaaaatgcaccggcac
atgaaaaatcaggctgcaaaacaaagggtcatcgagctgttaaaagccgtaaaaataccc
tcaccttccgagagggcagcagagtatccccatgagttcagcggaggaatgaggcaaaga
gcaatgattgcaatgggattggcctgcaccccctcccttatcatcgccgatgagcccacc
acagggctcgacgttacaatccaggcccagatcgttgaattgctaaaggaagtgctggag
cagtcgggagcctcaatgctcctgatcacacacgaccttggagttgcttccgagctgtgc
gattccatcgccgtgatgtatgcaggggagatcatagaatatgccggggtaatagacctg
ttcaaaaaccccggacacccctacacccgtggattttttgattcccttccgaacaggggg
ttaaaacccatgcccggtacatgcccgagtatgataaacctcccggctggctgcaagttc
catccgagatgtccccatgcaagcagccggtgtgaaaaagaaaaaccggatatgctgaaa
gtaggggaaaaacactatgtgaggtgctttttgcatgattga
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