Malus sylvestris (European crab apple): 126594571
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Entry
126594571 CDS
T09027
Name
(RefSeq) probable E3 ubiquitin-protein ligase LOG2
KO
K27504
E3 ubiquitin-protein ligase LOG2 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126594571
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126594571
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126594571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-P11
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
126594571
NCBI-ProteinID:
XP_050116889
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All DBs
Position
12:18216969..18220073
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AA seq
370 aa
AA seq
DB search
MGNSGSRNNGGRRRHASRQNHPVPPPPAPPQPEISQNRYVFAAATPYPSQYPNPNPPQYP
NPNPSQYYQYPGYYPPPPMPVPLPAPYDHHHRVPHPQVDTVHPNWAGGRYRCGPVMQAPA
PYVEHQKAVTIRNDVNLKKETLKVEPDEENPGSFLVSFIFDATVAGSITIIFFAKEGEDC
NLTPMKFNLHPPVTVHFEQGLGQKFRQPSGTGINFSMFEDAELLKVADLDIYPIAVKAEA
SPPAHDGSEGSPASVTTNSQITQAIFEREKGEFQVRVVKQILWVNGMRYELQEIYGIGNS
VEGEVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL
EIKVNNGPEE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacagcgggagcagaaacaacggcggccgccggagacacgcctcccgccaaaac
caccctgttccgcctcctccggccccacctcagcccgaaatctctcaaaaccgctacgta
ttcgcagcggcgactccgtacccgtctcagtaccccaaccccaacccgccccagtacccc
aaccccaacccgtcccagtactaccagtacccgggttactacccgccgccgcccatgccc
gtgcctctgccggctccgtacgatcaccaccaccgcgttccccatccccaagtggacacg
gtgcatccaaattgggctggcgggcggtaccggtgcggcccggtaatgcaggctccggcg
ccgtacgtggagcaccagaaggcggttactataaggaacgatgtgaatctgaagaaggag
actctgaaggtcgagcccgatgaggaaaaccctggaagcttcctcgtgtcttttattttc
gatgccacggttgcagggagcatcaccattatcttctttgcgaaagaaggcgaggattgt
aacctgacaccaatgaagtttaaccttcatccacctgtgacggtacattttgaacaaggt
ctgggccagaagttcaggcagccttccggaactggaattaacttttcaatgtttgaggat
gctgagttactgaaagtagctgacttggatatctatcctatagctgtgaaggccgaggca
tcccctcctgcccatgatggatcagagggaagccccgcatctgtaacaacaaactcccag
ataactcaggctatatttgagagggagaaaggtgaattccaagttagggttgtcaaacag
attctctgggtgaatgggatgaggtatgaactacaggagatatatggcattggtaattct
gttgaaggtgaagtggacgggaatgacccaggaaaagaatgtgtaatttgcctgtctgaa
ccacgggacacaactgttcttccatgcagacacatgtgcatgtgcagtgggtgtgccaag
gtcttgagattccaaacaaaccgatgcccaatttgccggcaaccagttgagaggcttttg
gagataaaggtcaacaatggccctgaggaatga
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