Malus sylvestris (European crab apple): 126606748
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Entry
126606748 CDS
T09027
Name
(RefSeq) DNA topoisomerase 1 alpha-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126606748
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
126606748
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Topoisomerases
126606748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
RodZ_C
LPP
Motif
Other DBs
NCBI-GeneID:
126606748
NCBI-ProteinID:
XP_050130093
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All DBs
Position
16:complement(14435282..14442386)
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AA seq
886 aa
AA seq
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MMAVQTSTKLNLCEDEDDEPLVFKRYSTKSKPNQLNAEANKLSAERQVGQPGKQLSEHRY
SNGLNSSVQKVKMVPSTKSPPVKSPLASPKASTSSAGASPVSNSKASTSSRASPVSKSPP
STTLDDQSKRLSEQNKSTTIKEEINSIEHLAQGNSDSEDEKPIGARLGKVKPSEDSDDDK
PLSSRIAPKSKVGTSGSWPYDSNERKPVVSKVQKNGSSTIDKGKASSVVSSKRPLDKVNS
SENSSAKRPKVSDSSTSAKNKQASAKKEPKEEDDDDDDDFVPISQRSKKVTSDSKPSLTK
QTVTKVGSSSITKTIKKGQKASKFSKYSKSTTKPPGSNDGQIKWTTLKHNGVIFPLPYNP
HGVKMLYNGKPVTLTPEQEEVATMYAVMKDTDYVQKETFRNNFWADWHKLLGKNHVIQKL
DACDFTPIYDWYQNEKEKKKQMSTEEKKALKEEKLKQEEKYMWAEVDGDKEKVGNFRVEP
PGLFRGRGEHPKSGKLKRRIRPSDVTINIGKDAPIPECPIPGESWKEVRHDNTVTWLAFW
NDPINQKEFKYVFLAPSSSLKGKSDELKYDKARRLTDCIGKIRASYTKDFTSKDVSKRQI
AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIPPNSLEFNFLGKDSIRYENTV
EVEIPVYKAIMQFQSGKSGSDDLFDLLDTSRLNAHLKEKMDGLTAKVFRTYNASVTLDNI
LNKETKDGDLSEKLVVYQHANKEVAIICNHQRTVSKSHSAQMSKLTEKIAELQGNLKELK
VDLDRAKKGKPPLKDADGKQKKNLTPEALERKIAQTNAKIEKMELDMRIKEDLKTVALGT
SKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMRVEPDFRF
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttcagacttctactaaactgaatttatgtgaagacgaggatgatgaacct
ttagttttcaaacggtacagcacaaaatctaaaccgaatcaattaaatgctgaagcaaat
aaattatcagctgagaggcaagttggacaaccagggaagcagttatctgagcaccgttat
tccaatggtctaaactcgagtgttcaaaaggttaagatggttccatcaaccaaatcacca
ccagtaaaatctccgctagcaagcccaaaagcttcaacttcatctgctggggcatcacca
gtatcaaattcaaaagcttcaacttcatctagggcatcaccagtttccaaatcaccaccg
tcgactacattagatgatcagtcaaagcggttgtcagaacagaataagtctaccacgatt
aaggaggaaattaattctattgaacatcttgctcaaggaaatagtgattctgaagatgaa
aaaccgataggtgccagactggggaaagtgaaaccttctgaagattcggatgatgataaa
cctttatcatcaaggattgcaccaaagtccaaggtgggaacatcaggcagttggccttat
gattctaacgaaaggaagcccgttgtttcaaaagttcagaagaatggttccagcacaata
gataaaggcaaagcttcatctgtggtctctagtaagaggcctctagataaggtcaattct
tctgagaactcttcagctaaaaggccaaaagtttcagattcttctacatctgcaaagaat
aagcaggcatcagccaaaaaagaaccaaaggaagaagatgatgatgatgatgatgacttc
gttccaatttcccagaggagtaagaaagttacatctgatagtaaaccatctctgacaaag
caaacggtaaccaaagttggttcatcctcaatcacgaaaacaatcaagaagggccaaaaa
gcttcaaaattttcaaagtattctaagtcgacaacaaagccaccgggctctaatgatggg
cagataaaatggactactttaaaacacaatggtgtcattttcccgcttccttacaaccct
catggggtaaagatgctctataatgggaagccagtcaccttgactcctgaacaagaggag
gttgcaacaatgtatgcagtgatgaaagatactgattatgtgcagaaagaaacattcaga
aacaatttctgggctgattggcataagttgcttgggaagaaccatgtaattcagaaattg
gatgcttgtgattttacgccaatatatgactggtatcagaatgaaaaggaaaagaagaaa
caaatgagcacggaagagaagaaggccttgaaggaggagaaactgaaacaagaggagaag
tatatgtgggctgaggttgatggtgataaggagaaggttggaaacttcagagttgaacca
cctgggttatttcgaggccgtggagagcatccaaagtcgggaaagctgaaaagacggatt
cgtccaagtgatgttacaattaatataggaaaggatgccccaattccagaatgtcccatc
cctggtgaaagctggaaagaagtaagacatgacaatacggttacatggttagctttctgg
aatgatccaattaatcaaaaggaattcaaatacgtatttctggcacctagtagttccttg
aaggggaaaagtgacgagctgaaatatgataaagcaaggagattgacggactgcatagga
aaaatcagggcttcatacaccaaggattttactagtaaagatgtatctaagcgccagatt
gcggttgctacctatctcattgataaacttgccctcagggcgggcaatgagaaggatgat
gatgaagccgatactgttggttgctgcactttaaaagtagagaatgtaaaagcaatcccc
cctaactcgttggagttcaacttccttggtaaagattcaatcagatatgaaaatactgtt
gaagttgagattcctgtttacaaggcaattatgcagttccagtctgggaaaagtggcagt
gatgatctctttgacttgttggataccagtagattgaatgctcatctaaaggaaaaaatg
gatggccttacagcgaaagtgtttcgtacctacaatgcatctgtcacattggataacata
ttgaacaaggaaaccaaagatggagatctttcagagaaactcgttgtttatcagcatgca
aacaaagaggtcgccattatttgtaatcatcagcgtactgtctcaaagtctcacagtgca
caaatgtctaagttaacggagaagattgctgaacttcagggcaacctgaaagagctgaaa
gtagatttggacagggccaaaaaaggaaagcccccactgaaagatgctgatggaaagcaa
aagaaaaatttgaccccggaagcgttggagaggaagatagctcaaacaaatgcaaagata
gaaaaaatggaactggatatgagaattaaagaggatctgaaaacagtggcattgggaacg
tcgaaaatcaactatcttgaccctaggatcaccgttgcttggtgcaagcgacatgaagtt
cccatcgagaagatattcaacaagtcgctcctcgcaaagttttcttgggcaatgcgagtg
gagcctgacttcagattctga
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