Malus sylvestris (European crab apple): 126609686
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Entry
126609686 CDS
T09027
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
msyl
Malus sylvestris (European crab apple)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
126609686
NCBI-ProteinID:
XP_050133513
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Position
17:complement(30331382..30343892)
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AA seq
1407 aa
AA seq
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MASSSSSVTRTPTLDSTHLFLAALAAFSHQPNPPHPSFPPIPSTFPHSKLIPKTRFAVDA
FRHAGDHSVSYFLSHFHSDHYGGLSPNWAKGVVFCSPITARLLTEVLKVSPHFVVALPLG
EAVVIDGVKVVLIDANHCPGAVQFLFKIPDMNGKFERYVHTGDFRFSGSMKLDPFLCEFV
GSDAVFLDTTYCNPKFVFPSQQESVDYIASVIERVGGECKSEMKNVLFLVATYVIGKEKI
LLEIAHRCNRKVHVDARKMAVFRVLGYGENGVFTEDECESDVHVVGWNVLGETWPYFKPN
FVKMKEIMAERGYSKVVGFVPTGWTYEVKRNKFSVRSKDSFEIHLVPYSEHSNYEELREY
VRFLKPKRVVPTVGLDVEKLDSKHASKMQKHFAGLVDEMANKKEFLKSFRLGSKEVADSV
ENESNKGPILGLGEEKEALSYDKDIVGNSIISLGIELSSSLQEPDRQNQVVLNDEEAEKI
VQELRDCLPTWVTHEQMLVLIGSTGGDIVEAVSNFYERETEFHEQVNASRIADSVSQTTS
TCDSASLPKAGSDKSSPCGSTDIPLSQDYISLMPRNMIKSGISPGKRASKVNNKVNKKLK
LNSKLDSGGPKQLAITRFFSKVLPNVPETAVAGSLHEQNPKYENLLNDDTKSYRDEIHQF
LQIIDGDESLESYAATILEEANGDINKALNIYYSNREGRSGENEEELVVNEKSVQFHCHI
NNCSSDKEKTQSRKMEPTTDSSVQVSLPVNVNITFVSLPPEKYNPIEHACWRNGQNAPYL
HLARTFDLLEDEKGKIKATSMLCNMFRSLLALSPDDVLPSVYLCTNKIAADHENVELNIG
GSLVTSALEEACGTSRSKIREMYSELGDLGDVAQACRQTQKLLAPPSPLLIKDVFSALQK
ISVQTGSGSTVRKKSLILNLMRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQAVVIN
SSYNFNNEGRVENMKDKLQRHSAAVVEAYNVLPNLDLVVPSLMDKGVGFSSSTLAMVPGI
PIKPMLAKITNGVQQALKLFENKAFTCEYKYDGQRAQIHKLVDGSLRVFSRNGDESTSRF
PDLINIVNASCKPDAETFILDAEVVAVDRNNGHKLMSFQELSSRGRGGRDTSITLDSIKV
DICVFVFDIMFANGKQLLGFPLRQRRTYLKDMFYVEKPGYFEYAKEITVEADDACLTSEA
TLAKISCFLENSFQSSCEGIMVKSLDVDAGYSPSKRTDTWLKVKRDYMEGLNDSLDLVPI
GAWHGNGRKAGWYSPFLMACYNPETEDFQSVCRVMSGFSDSFYIEMKGFFSGDKILSRKP
PYYKTSEMPDMWFSPELVWEIRGADFTVSPVHQAAVGLVHPSRGISIRFPRYIRTVADRK
PDECSTAEDIAAMFRSQTRKMDVAAEN
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctcctcttccgtgaccagaaccccaacccttgattccacccacctcttc
ctcgccgccctcgccgccttctcccaccaacccaaccctccccatccctctttccctcca
attccctccacattccctcactccaaactcatccccaaaacccgtttcgccgtcgacgca
ttccgccacgccggcgatcactccgtctcctacttcctctcccatttccactccgatcac
tacggcggcctctcccccaattgggctaaaggcgtcgtcttttgttctccgatcaccgcc
cgtcttctcactgaggtgctcaaggtctctcctcatttcgttgtcgctctgccgctgggc
gaagccgttgtaatcgatggggtgaaggttgtactgattgacgctaatcactgtccgggt
gcggttcagttcttgtttaaaattccggatatgaacggaaagtttgagaggtatgttcat
actggcgattttaggttttcgggttcaatgaagttagacccttttctgtgtgaatttgtg
ggttccgatgctgttttcttggacactacgtattgtaatccgaaatttgtgtttccttca
caacaagagtctgtagattatattgctagtgtgatagaacgagttgggggtgaatgtaaa
agtgaaatgaaaaatgttttgtttcttgtagctacttatgtaattggaaaagagaagatt
ttgcttgaaattgcgcataggtgtaatcgtaaggtgcatgtggatgctcgtaaaatggca
gtttttcgtgttttgggttatggagagaatggggtatttacagaggatgaatgtgaaagt
gatgtacatgttgttgggtggaatgtcttgggtgagacttggccatattttaagcctaat
tttgtgaaaatgaaggagattatggccgaaagaggatactctaaggttgtgggttttgtt
cctactggttggacttatgaagtgaagcgtaataagttttcggttaggtcgaaggattcg
tttgagatccatcttgtaccatatagtgaacattcaaactatgaagaacttagagaatat
gtgaggtttttgaaaccaaagcgtgttgttcctacagtgggcttggatgttgaaaagctt
gatagtaagcacgccagtaaaatgcaaaagcattttgctgggttagttgatgaaatggca
aacaagaaggagttcttgaagagctttcgtcttgggtctaaagaagtagctgacagtgta
gaaaatgagtccaacaagggccccattttggggctcggtgaggagaaagaggcactgtca
tatgataaggatatagtaggaaatagtattatcagtttaggcattgaattatcatcttct
ctacaagaacctgatcgacaaaatcaagtggtgttaaatgatgaggaagcagaaaaaatc
gtccaagaacttcgtgattgtttgcccacatgggtcacccatgagcagatgctagttttg
attggtagcacgggaggggacatcgttgaagcagtttctaatttctacgaacgcgagaca
gaatttcatgagcaagtaaatgcttctagaattgctgattctgtgtcccagactacctca
acttgtgactctgcatcacttccaaaagcaggctctgataagagcagtccatgtggaagt
actgacattcctttaagtcaagattatatctcacttatgccaaggaatatgattaaaagt
ggaatatctcctgggaaaagggcgagtaaagttaacaataaggtaaacaaaaagttgaaa
ttaaattcaaaattggattcaggcgggccgaagcaactggcaataacaaggttttttagt
aaagtcttaccaaatgttccagaaactgcggtggctggttcattgcatgaacaaaaccct
aaatatgaaaatttgctcaacgatgacaccaaatcatacagggatgagatacatcagttt
cttcagataatagatggtgatgaatcgctagagagctatgctgccaccattctggaggag
gcaaatggagatatcaataaagcgctaaatatatattactctaatcgtgaaggaaggtcc
ggtgagaatgaagaagaattggtggttaatgaaaaatcagttcagttccactgccacata
aataattgctcttccgacaaagagaaaactcagtcaaggaaaatggaaccaacaactgat
tcgtctgtgcaggtttcattaccagtgaatgtaaatataacttttgtgtctctaccacca
gaaaaatacaatcctatagaacatgcttgctggaggaatggacagaatgctccatattta
catcttgcaagaacttttgacttacttgaggatgaaaagggcaagataaaagctacttcc
atgctctgcaacatgttcagaagtttgcttgccttgtctcctgatgacgtgctgccttca
gtgtatttgtgcacaaataagatcgctgctgaccatgaaaatgtggagctaaacatcggt
ggaagtttggtcacatcagcactggaagaagcatgtgggacaagccgatccaaaataagg
gagatgtacagtgagctgggtgatctaggtgatgttgctcaagcatgccggcagacacaa
aagttacttgcccctccttcaccgttgttaataaaggatgtattttctgcactccaaaag
ataagtgtacaaacaggtagtggaagcaccgttcgaaagaaaagcctcattttgaatcta
atgcgctcttgtagagagaaagagatgaagtttcttgttagaactttggtcaggaattta
cgaattggagcaatgatgaaaactgttctacctgctctggctcaagctgttgtcattaac
tcctcgtataacttcaataatgaaggaagagtagaaaatatgaaagataagcttcagcgt
cattcagctgctgtagtcgaagcgtacaatgttctgcccaatttggatttggtcgttcct
tccctcatggacaagggcgttggattttcttcgtcaaccttggcaatggttccaggaata
cctattaagccaatgcttgcaaagatcacgaatggtgttcagcaagcactgaagctcttt
gaaaataaagcttttacatgtgaatacaaatatgatggtcagcgtgcccaaattcacaaa
ttggttgatgggtctctgcgcgttttttcacgaaatggggacgagtcaacatcaagattt
ccagatctgattaacatagttaatgcatcttgtaagcctgatgcagaaacttttatacta
gatgcggaggtagttgcagtcgataggaataatggtcacaagctaatgtcttttcaagaa
ttgtcgtcacgtgggagagggggcagagatacatcaattacattggatagcataaaggtc
gacatctgcgtatttgtctttgatatcatgtttgccaatggaaagcagttgctgggcttt
cctctgcggcaaaggcgaacatatttgaaagatatgttttatgttgagaagccgggttat
ttcgaatatgccaaggaaattacagttgaagcagatgatgcttgtttaaccagtgaagcc
acgttagcaaagatcagctgctttcttgaaaattcattccaatcctcatgcgaagggatt
atggttaaatctttagatgttgatgctggatattctccatcaaagcgtacagacacatgg
ctaaaggtcaagcgagactacatggagggattgaacgactctcttgatttagtcccaatt
ggagcttggcatggaaacgggagaaaggcaggctggtacagtccatttctcatggcatgt
tataaccctgagactgaagatttccaaagcgtctgccgtgtcatgtctgggttttccgac
tcattttacattgagatgaaaggtttcttttcgggagacaagatcttgtccagaaaacca
ccttattataaaacctctgagatgcctgatatgtggttttctccggaacttgtgtgggaa
ataagaggtgcagactttacagtgtctcctgttcaccaggctgctgtaggtttagtgcat
ccatcacgcggcatttcgatcagattcccaaggtacattcgcactgtggcagatagaaaa
ccagatgaatgtagcacagctgaagatatagctgcaatgtttcgttctcagacaaggaag
atggacgtggcagctgaaaattga
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