Malus sylvestris (European crab apple): 126610378
Help
Entry
126610378 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126610378 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126610378
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126610378
Surveillance factors
Other surveillance factors
126610378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
SAP25
Motif
Other DBs
NCBI-GeneID:
126610378
NCBI-ProteinID:
XP_050134395
LinkDB
All DBs
Position
17:489694..496737
Genome browser
AA seq
1499 aa
AA seq
DB search
MAHGKVSLPQDLLPSNLVDSHFSAKDEAFQGNIEEKALTGSLDMSIGDQVASDSSIPLSP
QWLYAKPDSKTLATGASGEMHANDSLSHGNSTDPNSRDIWRVDGSQEKKDWKRSAPDLDS
SRRWREEERETGLLGRRDRKKEDRRVGASLTRDATENTAEDRRVGATSTKDAAENKVLSS
DRRNESRRDNKWSSRWGPEDKDKDSRIEKRAEVEREDVHAEKQSFSNSNRAASERDSDSR
DKWRPRHRIEVQPAGAAPYHAAPGFGMARGRVEKVGFAAGRGRSNTGCLQTGKPVLGKSG
HFADMYCYPRGKLLDIYRKQKKDSTFDIMPDGMEHVSPITQVGSIEPLAFVAPDAEEEAG
LGDILKGRITSSEVVYNSSGDKNVLNEDAKGSSNVTLSKEEGHFAANPEQNVQSAEKVIL
NNSFPVTVAEVSPICGLQTHMLKECVATEDEQKVLTVTAAADREIGPSNDDANSRSSGCQ
EQTSSSDHHYFKSNEDALLLERIVSPEDMSLCYLDPQGNIQGPFLGIDIIAWFEQGFFGI
DLPVRSFDAPNGSPFQELGEVMPHLKTKSGPVSDSSLPTQLEPLGAVGGSLDERISAPNY
DGGSAILNNQGIQNVVAEDEEIVFPGRSKGSSDCLLRSSPDIHGSFANPPSLHSHANEVS
ETNIPDQQDEKLHPFGLLMSELGGNSLLRPAQSSHSFFGMDDQVPFRDTFVEGATVANQD
SLGAMIDQPSFVETRPDNYIKNNANVSLGSIDSPHLPHMGQASNGFDPAEHIMSQKLLKE
QLQQLNHLSPFTVAHSAGTGVDRFPGFGFSDSKNPNIQPSFHHPVADMEHIFEMQHQQQH
QLELRQQQHELELQQQQRKLERQQQQRWLELQEHQRQLELQEHQRQLEIQRQHQLELQHH
RQLELQQQQRQLELQQQRLLQDQLHQHQMKLQQQQKSQAQHLLLEHFLHQQMSDSGYGQW
KADATRGNPFDHLHSRKHLLDDLHQMSHSSRHDPLLEHIIQANIGRPGQTDFFDLISQAK
QRNMHTSELQPRLQQHELQAHQLSAALREQLQMEGERRIGANRFVDEASQVVRDPVGHHQ
AQMVGFSSSENYQQLPTHEPQLSHLNWNHAIRERLQGGFYEPNSLEFERSSVPASSLGMN
LDILSARGQGLDEFYSSHPFGLEHLPFGNNGHLEDGSAEALIPHSHLYAEQTRRDSEAAM
DFSDANIWSSSDGDKESSKQIFMDLHQKIGRQSTRLSEVDYQHHLSSSRNRGESVHHPFS
LLPDQAVGMNNSFTEGPFTSNPRAFMEDLSELEGNNWKKQVVKSYEGNMVEQEETSRELH
SNAHSRQSSLSSAGGGGSFYSSETGIDKPLGEEISNGRLPSTVTKGYDNALHRRRVLSSQ
DVLSEAALSLPVKQRNPAATQVSETQASSKNDAQFRRTSSYSDATVSEASFIDMLKKPVI
SEADAANRAVALESSDGGGQAGRTGKKKGKKGRQIDPALLGFKVSSNRILMGEIHRLND
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacggaaaagtcagtctccctcaagatctcctcccctcgaatctggtcgattca
cacttctccgccaaagatgaagccttccaaggaaacattgaggagaaggcgctaacgggg
tcccttgacatgtcaattggtgatcaagttgcctcagacagcagcatccctttgtctccc
cagtggctgtatgctaaaccagattccaagacactggcaactggagcatcaggagaaatg
catgcaaatgattctctgtctcatggaaactcaactgatcccaattcgagagacatttgg
cgtgtagatggatctcaggagaaaaaagattggaagaggagtgcacctgatttagatagt
agccgccgctggcgtgaagaggagagagaaacaggcttacttggtaggagagatcgaaag
aaagaagatcgccgtgtaggtgctagtctaacgagggatgctactgagaatacagcagaa
gatcgccgtgtaggtgcaacttcaactaaggatgctgcagaaaataaagtattgtcttct
gaccgccggaatgaatcccgaagagataacaaatggtcatcaaggtgggggcctgaagat
aaagacaaggactctcggatagagaaaagggctgaggttgagagggaagatgtacatgct
gagaagcagtctttttccaatagcaaccgtgcagcttctgagcgtgatagtgattctcgt
gataagtggaggccgcgccatcgcatagaggttcaaccagctggggcagccccatatcat
gctgcaccaggatttgggatggctcgggggcgtgtggaaaaagtaggatttgctgctgga
cgagggaggtctaacactggatgcctacagactggcaaacctgttcttggaaaatctggc
cattttgctgatatgtattgctatcccagaggaaagctccttgatatttatcgcaagcaa
aagaaggactcaacttttgatattatgcctgatgggatggagcatgtatcaccaataacc
caagtgggctcgattgagccattggcttttgttgcacctgatgcagaggaagaggctggt
ctgggagatatattgaagggaagaattactagcagtgaagtggtatacaactcgtctggg
gacaagaatgtattaaatgaagatgctaaaggatctagcaatgtcactttaagcaaggag
gaaggacactttgcagctaacccagaacaaaatgtccaatctgccgaaaaggtcattttg
aacaattcttttccagttactgtcgctgaggtgtcacctatttgtggcttacaaacacat
atgttaaaggaatgtgttgctactgaagatgagcagaaagttctgacggtcacagcagcg
gcagatagggagattggtcctagtaatgatgatgctaactcaagaagttcagggtgccag
gagcaaacctcaagcagtgatcatcactatttcaagagcaatgaggacgcccttctattg
gaaagaattgtctcacctgaggatatgagtttgtgctaccttgatcctcaagggaatatc
caggggcctttcctggggatcgatataattgcatggtttgagcaaggatttttcggaatt
gacttgccagttcgttcatttgatgctcccaatggatctcctttccaagaacttggtgaa
gtgatgccacatctgaaaactaaatccgggcctgtctccgactctagtttgcctactcaa
ttagagccattgggtgctgttggaggcagcttggacgagagaatatctgctccaaactat
gatggggggtctgctattctaaacaatcaaggcattcagaatgttgttgcagaagatgag
gaaattgtatttcctggaaggtctaaaggcagcagtgattgccttttaaggtcttcacct
gacattcatggctcatttgcaaatcctcccagccttcattcccatgcaaatgaagtttcg
gaaactaacatccctgatcagcaggacgaaaagctgcatccttttggcctgttgatgtca
gagctcggaggcaactcacttttaaggcctgctcaatcatctcattcgtttttcggcatg
gatgatcaggttccttttagagataccttcgttgaaggtgccactgttgctaatcaggat
tcccttggtgccatgattgatcaaccttccttcgtggagacacggcctgataattatata
aaaaataacgccaatgttagtctgggttctatagattctccccatttacctcacatgggg
caagcaagcaatggctttgacccagcagaacatataatgtcacagaagttactaaaagaa
cagcttcagcagctgaaccatctttctccatttactgttgcacatagtgcaggaacagga
gtggaccggttccctggatttggtttttctgacagcaagaaccctaatatccagccgtca
ttccatcatccagtggcagatatggaacatatttttgaaatgcagcatcagcagcagcat
cagttggagcttcgtcagcagcaacacgagttggagcttcagcaacagcagcgtaagttg
gagcgtcagcaacagcagcgttggttggagcttcaggaacaccagcgtcagttggagctt
caggaacaccaacgtcagttggagattcagcgccagcatcagttggagctgcagcaccac
cgtcaattggagcttcagcagcagcagcgtcagctggagcttcagcaacagcgtctcttg
caggatcaacttcaccaacaccaaatgaaattgcagcaacaacagaaatctcaagctcaa
cacttgctccttgaacattttttgcatcaacagatgtccgattctggttatgggcagtgg
aaggcagatgctacaagaggcaaccctttcgatcatttacattcaaggaagcaccttcta
gatgacttgcaccagatgtcccattcctcgaggcatgatccattattagagcacatcatc
caagcaaatataggacgcccgggacagactgatttctttgacctgatatctcaggccaag
caaaggaatatgcacacttcggagctgcaacctcgtcttcagcagcatgagctgcaggca
catcagttgtccgcagcattgagggagcaactgcagatggaaggggaaaggcgtatcggt
gcgaaccggtttgtagatgaagcaagccaagttgttagggatcctgttggtcatcaccag
gctcagatggtaggatttagttcttcagaaaattaccagcaacttcccacccatgaaccg
caactaagccatctcaactggaatcatgccatacgggagcgactccagggagggttctac
gaacctaactctctggaatttgagaggtcatctgttcctgctagttcgcttgggatgaac
ttggatattctcagtgcacgtgggcagggtctggatgagttttattcgtctcatccattt
ggtttggagcacttgccttttgggaacaatggacatctggaagatggctccgctgaagca
cttataccgcattcgcatctttatgccgagcaaacccgccgagactcagaagctgccatg
gatttttctgatgcaaatatatggtcttcatccgatggtgataaagaatcctcaaaacaa
atttttatggaccttcaccaaaaaatcggtcgtcaatctacacggttatcagaagttgat
tatcagcatcacctatcatcttctagaaaccggggagaatctgtacatcatccatttagt
cttctccctgatcaagcagttggtatgaacaactctttcacggaagggccctttacatct
aatcccagagcatttatggaagatttatcagagttggagggaaataattggaagaagcag
gttgtgaaaagctatgaaggcaacatggtagaacaagaagaaacatcaagggaacttcat
agtaatgcccatagcaggcagagttcacttagcagtgctgggggaggtgggagtttttac
agctccgagacaggaatagataaaccgcttggagaagagatttctaatgggaggctgcct
tctactgtaaccaaagggtacgacaatgctttgcatagacgccgggttttatcttcccag
gacgttttgtctgaggcagcactttctttgcctgtcaaacaaagaaatccagctgcaacc
caggtctctgaaacgcaagcatctagcaagaatgatgcgcaatttaggaggacttcgtct
tacagtgacgctacagtgtccgaggcatcattcatagacatgctcaagaaaccagtcatt
tcagaggctgatgcagccaacagagcagtggcactggagtcatctgatggaggtggccaa
gcggggcggactggcaagaagaaagggaagaagggaagacagattgatcctgctctcctc
ggctttaaggtttccagcaaccggatcttgatgggcgagatccatcgcctcaatgattga
DBGET
integrated database retrieval system
