Malus sylvestris (European crab apple): 126618069
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Entry
126618069 CDS
T09027
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126618069
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
126618069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
AAA_23
AAA_27
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
126618069
NCBI-ProteinID:
XP_050142122
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Position
4:complement(7595949..7605865)
Genome browser
AA seq
792 aa
AA seq
DB search
MEDDGGERSSIVVGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLQFYDPM
VIIVSPNKLAPDGMVGVSELVDRFYATVKKVVMARGCFDDTKGAVLIKNLSAKEPSALGL
DTYYKQYYLCLAAAAATIKWIEAEKGVIVTNHSLVVTFNGSFAHMNIDATSVQNLEIIEP
LHSTLWGTSNKKRSLLNMFKTTKTVGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLAQVLRKFPKESDRVLCHFCFKPKKITNKVVGVDCARKSQVLVSSIILLKTALDAL
PLLSKVLKDAKCFLLANVYQSVCENEKYAAIRKRIGEVIDEDVLHARVSFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREDFKLPNLKLPFNNRQGFYFSMPHKDIQGK
LPSQFIQVLKHGNNIHCSTLELASLNVRNKSAAAECYLRTEVCLEELVDAIREDVSALTL
LAEVLCLLDMIVNSFALAISTKPADRYTRPEFTDNGPLAIDAGRHPILETIHNDFVPNNI
FLSEASNMVLIMGPNMSGKSTYLQQVCLIVILAQMGCYVPARFATLRVVDRIFTRMGAVD
NLESNSSTFMTEMKETAFIMQNVSQRSLVIMDELGRATSSSDGFAIAWSCCEHLLSLKAY
TIFATHMENLSELVTIYPNVKILHFDVDIKNNRLEFKFQLKDGPRHVPHYGLLLAEVAGL
PSSVMETARNITSRITEKEVKRMEVNCLQYHPVQMAYHVVQRLICLKYSSQDEDSIREAL
HNLKESYIHGML
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggaggagagaggtcgagcatcgtcgtcggtctcatcgagaacagagcc
aaggaggttggagtggcagcttttgatttaagattagcttctctgcatctttctcaatat
attgaaactagcagttcatatcagaatacaaaaaccttgctgcaattctatgatcctatg
gtgattattgtttcaccgaacaagctggcacctgatggtatggttggagtttcagagttg
gtggacagattttatgctacagtcaagaaggttgtaatggcccgtggttgcttcgatgac
actaagggtgccgtactgattaaaaatttatcagccaaggaaccttcagcactaggattg
gatacttattacaagcagtattacctctgcttagctgctgctgcagctacaattaagtgg
atagaagcagagaagggagtcatcgtcacaaaccactcacttgtggtcacttttaatgga
tcatttgctcatatgaatattgatgcgactagtgtccaaaacttggaaatcattgagcca
cttcattcgacactttggggcaccagcaacaagaaaagaagtttattaaacatgtttaag
acaacaaaaacggttggagggtccagacttcttcgtgccaatcttttgcagcctttaaaa
gatattgaaactataaatgctcgtctagattgcctggatgagctcatgagcaacgaacag
ctgttctttggactagctcaggttctgcgtaaatttccaaaagagagtgatagggtgctt
tgtcacttttgcttcaagccaaagaaaattacaaacaaagttgtgggtgttgattgtgct
agaaaaagccaagtgttggtttcaagtatcattcttctgaagactgctctagatgccttg
cctttactctcaaaggttcttaaagatgcaaagtgttttcttcttgcaaatgtttaccag
tctgtatgtgaaaatgagaagtatgctgccattagaaagaggattggagaggttattgat
gaggatgtgcttcatgcacgggtttcatttgtagcccgcacacagcagtgttttgctgtc
aaagctggaatcgatggactcttggatattgcacggagatcattttgtgatactagtgaa
gctatacataatcttgctaacaagtatcgtgaagatttcaagttgcccaatttgaaactc
ccgtttaacaataggcaagggttctactttagcatgccacataaggacattcaagggaaa
cttcctagccagttcattcaggtattgaaacatgggaataatatacactgctcaaccttg
gagcttgcttctctaaacgttagaaataagtctgcagctgcagaatgctacttacgtaca
gaagtttgcctagaagaattagtagatgccatacgagaggatgtttctgcactcacactg
ctggcagaggtcttatgccttttggatatgattgttaattcatttgcacttgccatttcc
acaaagcctgctgatcgttatactagacctgaattcacagataatggcccactggcaatt
gatgctggaagacaccctatcctagagactatacacaatgactttgtccccaacaatatc
tttttatcagaggcatcaaacatggtgctcatcatgggcccaaacatgagtggaaagagc
acttatcttcaacaagtgtgtcttatagttattcttgctcagatgggttgctatgtacct
gctcgctttgcaactctaagggttgttgatcgtatatttacaaggatgggtgcagtagat
aatcttgaatcgaactctagtacgttcatgacagaaatgaaagaaacagcttttatcatg
caaaatgtctcccagaggagtttggttatcatggatgaacttgggagggccacatcttcc
tctgatggatttgcaattgcttggagctgctgcgaacatttattatcactgaaagcgtac
acaatatttgccactcatatggagaacctatctgaactagtaaccatctacccaaatgtg
aagatacttcactttgacgttgatattaaaaataatcgtttagagttcaagtttcaactg
aaggatgggccgagacatgttccacactacggccttctattagcagaagtggcaggatta
ccaagctccgtgatggaaacagccagaaacatcacatccaggatcacagagaaggaagtg
aagaggatggaagtaaactgcctgcaataccatccagtccagatggcttaccacgttgtg
cagcggctgatatgtttgaagtactcgagccaggatgaggattcgatcagggaagcacta
cataatttgaaagagagctacattcatggaatgctgtag
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