Moorella thermoacetica ATCC 39073: Moth_2082
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Entry
Moth_2082 CDS
T00308
Name
(GenBank) conserved hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mta
Moorella thermoacetica ATCC 39073
Pathway
mta03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Moth_2082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mta03400
]
Moth_2082
Enzymes [BR:
mta01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Moth_2082
DNA repair and recombination proteins [BR:
mta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Moth_2082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
ABC20375
UniProt:
Q2RGR4
LinkDB
All DBs
Position
complement(2173097..2174017)
Genome browser
AA seq
306 aa
AA seq
DB search
MGQGRQYIRSQLLKRQLHLTNLDKVFWPEGLTKFDLIKYYVDMAPFLLPYLRDRPLVLKR
YPDGITGEAFYQKECPAYAPDWVTTLPVYHADSSKTINYVLCNNEETLIWLANQGCIEVH
AWLSRAGRLEYPDIAVMDLDPSAGATFKDVLDIALLVHQALKEFNLSGYPKTSGATGLHI
FIPLEPRWTFHQVTAAMGYLARLVAGVYPRKATTERSIPKRKDRVYLDYLQNVRGRSMAF
PYSLRPLPGAPVSTPLTWEEVKRGMFSPKDFNIHTARERLQAYGDLYRGFLAQPNDLEPL
LKLAGV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggccagggccggcaatatatacggtcccaattgctgaagcgacagctccacttgacc
aacctggacaaggttttctggccggaaggtctgaccaagtttgatcttatcaagtattat
gtcgacatggctccctttctcttgccctacctccgggatcgccccctggtccttaagcgc
tacccggatggcataacaggggaggccttttaccagaaagagtgccctgcctatgccccg
gactgggttacgaccctgcctgtctatcatgctgatagcagcaagactattaattatgtt
ctctgtaataatgaagaaaccctgatctggctggccaatcaggggtgtatcgaggtccat
gcctggctctccagggccggccgcctggaataccccgatatcgccgtcatggatctggac
ccaagtgcgggggcaacttttaaagatgtcttggatatcgccctcctggtccaccaggct
ttaaaggagtttaacctcagcggctatcctaaaacctccggtgctactgggttgcatatc
tttatcccccttgaacctcgctggacctttcaccaggtgacagccgccatggggtacctg
gcgcggctggtcgccggggtttacccccgcaaggccaccaccgaacggtcgatcccgaag
cgtaaagatcgggtctacctggactacctgcagaacgtccgcggacggtccatggccttc
ccctacagcctgcgacccttacccggggcgccggtttcaacgcccctgacctgggaggag
gtaaagagggggatgttcagccccaaagacttcaacatccacaccgcccgggagcgcctg
caggcgtatggcgacctttatcggggttttctggcgcaaccaaacgatctggaaccgctg
cttaaactggccggggtttaa
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