Methylophaga thalassica: VSX76_04485
Help
Entry
VSX76_04485 CDS
T09743
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K12452
CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:
1.17.1.1
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha00520
Amino sugar and nucleotide sugar metabolism
mtha00541
O-Antigen nucleotide sugar biosynthesis
mtha01100
Metabolic pathways
mtha01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
VSX76_04485 (rfbH)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VSX76_04485 (rfbH)
Enzymes [BR:
mtha01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.1 CDP-4-dehydro-6-deoxyglucose reductase
VSX76_04485 (rfbH)
BRITE hierarchy
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
US22
Motif
Other DBs
NCBI-ProteinID:
WVI85879
LinkDB
All DBs
Position
1:576552..578198
Genome browser
AA seq
548 aa
AA seq
DB search
MNPLHTPHTESSSIALAIGDICVVNKAGMSPTLCVVVAIENATIECYEILAFTDDVSDLD
IFVFDDDSVDGSAQYLDLRFPLFVGSLDVASYQGKISTLNLERLLRALVQRQVKRYSQTK
FLHKDFLPGSSTVPVSGKVMDSDDIEHLVDASLDGWLTTGRFNAQFEKALAEFIGVKHVL
TVNSGSSANLLALTALTSPKLGDKALQKGDEVITVAAGFPTTVNPILQNGLVPVFVDITL
PSYNIDVSQLEAALSDKTRAIMMAHTLGNTFNIDAVVAFAREHNLWLIEDCCDALGTTYS
PDTELTDYRGQAIALDEPRHVGTFGDIATLSFYPAHHITMGEGGAVYTNNGQLKLILESF
RDWGRDCFCEPGQDNTCKKRFSYQLGQLPCGYDHKYTYSHLGYNLKITDMQAAVGLSQLA
KVTGFIEKRKANFQRLYAGLSSLQDYLLLPEAENNADPSWFGFAITLKQSNRADFIQYLE
QHKIANRLVFGGNLIKQPYFEQQSYRKVGELTVTDQVMNDSLWIGVFPGLSDEMIDYMID
TIQSYFKV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattacatacacctcacactgaatcttcatcaatcgccttagctattggcgat
atttgtgtcgttaataaagcgggaatgtcaccgacgttatgtgttgtggtggctatagaa
aatgccactattgaatgttatgaaatactggcatttaccgatgatgtctcagaccttgat
atatttgtttttgacgatgacagtgttgatggctcagcgcaatatttggacttacgattt
ccactttttgtcggttcacttgatgtggctagctatcagggcaaaatttcaacattaaat
ctcgaaagacttttaagggctttggtgcaacgccaggtaaaacgttacagtcaaacgaaa
tttctgcacaaagactttctgcctggaagcagtactgttccagtgtctggcaaggtcatg
gattctgatgatatcgagcatctggttgatgcctcattggatggctggctgactaccggt
cggtttaatgcccagtttgaaaaagcgcttgctgaatttattggtgtcaaacatgtgctg
acagtgaactcaggttcatcagccaacttgttggcattaactgcactgacttcacctaag
ttaggtgataaagcattacaaaaaggcgatgaagtgattactgtggcggcaggtttcccg
actacggtgaatcccattttacaaaatggtttagtgcctgtttttgttgatattactctg
ccttcctacaatatcgatgtcagtcagcttgaggcagcgttatcagataaaacacgagcc
attatgatggcgcacaccttaggcaatactttcaatattgatgccgttgtagcttttgct
cgcgaacataatctgtggttaatcgaagattgttgcgatgctttaggtaccacctattca
ccagatactgaactgactgattatcgtggacaagcaattgcgttagatgagcctcgtcat
gtaggcacctttggtgatattgcgacgttgagtttttatccggctcatcatataacgatg
ggagaaggtggtgcggtctataccaataatggccaactgaaattgattctggagtcattt
cgtgactggggcagagactgtttttgtgagccgggccaggacaatacctgcaaaaagcgc
tttagctatcaactagggcagttgccttgtggttatgaccataaatatacctattctcac
cttggttataacttaaaaatcactgatatgcaggcggctgtgggtttgtcacagttagct
aaagtcaccgggtttattgaaaaaagaaaagccaacttccaacgtctttacgcaggctta
tcttcgctacaggattatttgctactgcctgaagcagagaacaatgctgatccgtcgtgg
tttggtttcgctattaccttaaagcagagtaatcgagcggactttattcagtatcttgaa
caacataagatcgccaatcgattagtatttggcggtaatctcatcaaacagccttatttc
gaacagcaaagctatcgtaaagttggagaattaacagtcaccgatcaggtcatgaatgat
tctttatggatcggcgttttcccaggactatctgatgagatgattgattacatgatcgat
accatccaatcttatttcaaagtgtga
DBGET
integrated database retrieval system
