Macaca thibetana thibetana (Pere David's macaque): 126940592
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Entry
126940592 CDS
T08579
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04151
PI3K-Akt signaling pathway
mthb04510
Focal adhesion
mthb04512
ECM-receptor interaction
mthb04820
Cytoskeleton in muscle cells
mthb04926
Relaxin signaling pathway
mthb04933
AGE-RAGE signaling pathway in diabetic complications
mthb04974
Protein digestion and absorption
mthb05146
Amoebiasis
mthb05165
Human papillomavirus infection
mthb05200
Pathways in cancer
mthb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126940592
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126940592
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126940592
09142 Cell motility
04820 Cytoskeleton in muscle cells
126940592
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
126940592
09154 Digestive system
04974 Protein digestion and absorption
126940592
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126940592
09162 Cancer: specific types
05222 Small cell lung cancer
126940592
09172 Infectious disease: viral
05165 Human papillomavirus infection
126940592
09174 Infectious disease: parasitic
05146 Amoebiasis
126940592
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126940592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthb04147
]
126940592
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126940592
Exosome [BR:
mthb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126940592
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126940592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126940592
NCBI-ProteinID:
XP_050622539
LinkDB
All DBs
Position
17:complement(89705492..89859330)
Genome browser
AA seq
1669 aa
AA seq
DB search
MGPRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGL
PGNPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGS
PGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP
KGFPGLPGQPGPPGPPLPGQAGAPGFPGERGEKGDRGFPGASLPGPSGRDGLPGPPGSPG
PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGLIGEIGEKGQKGESCLICDTTGYRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEIYFDLRLK
GDKGDPGFPGQPGMPGRAGSPGRDGRPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGYGPTGPIGDKGQAGFPGGPGSPGLPGPKGEPGKVVPLPGPPGAEGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNG
LPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGI
RGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPG
PKGDKGSQGLPGVTGQSGLPGFPGQQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPG
LPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGE
KGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPG
IDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKG
VPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLQGPPGPK
GQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPTGPTGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcagcgtctggctgctgctgctgcccgccgcccttctgctccacgag
gagcacagccgggccgctgcgaagggtggctgtgctggctctggctgtggcaaatgtgac
tgccatggagtgaagggacaaaagggcgaaagaggcctcccagggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgat
actggagaaccaggactacctggaacaaaagggacaagaggacccccgggagcatctggc
taccctggaaacccgggacttcctggtattcctggccaagacggcccaccagggccccca
ggtattccaggatgcaatggcacaaagggagagagagggcccctcgggcctcctggcttg
cctggtttcgctggaaatcccggaccaccagggttaccaggaatgaagggtgatccaggt
gagatacttggccatgtgcccgggatgctgttgaaaggtgaaagaggatttcccggactc
ccagggaatccaggcccaccaggactgccagggcttcaaggtcctgttgggcctccagga
tttaccggaccaccaggtcccccaggtcctcccggccctccaggtgaaaagggacaaatg
ggcttaagttttcaaggacccaaaggtgacaagggtgaccaaggggtcagtgggcctccg
ggagtaccaggacaggctcaagttcaagaaaaaggagattttgccaccaagggagaaaag
ggccaaaaaggtgaacctggatttcagggaatgccaggggtcggagagaaaggtgaaccc
ggaaaaccaggacccagaggaaaacctggaaaagatggtgacaaaggggaaaaagggagt
cccggttttcctggtgaacccgggtacccaggactcgtaggccgccagggcccacaggga
gaaaagggtgaagcaggtcctcccggcccacctggaattgttataggcacaggacctttg
ggagaaaaaggagagcggggctaccctggaactccggggccaagaggagagccaggccca
aaaggtttcccaggactaccaggccaacccggacctccaggcccccctctacctgggcag
gctggtgcccctggcttccctggtgaaagaggagaaaaaggtgaccgaggatttccgggt
gcatctctgccaggaccaagtggaagagacgggctcccgggtcctcctggttcccccggg
ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt
gaccagggtcctcctggaattccagggcagccaggattgataggcgaaattggagagaaa
ggtcaaaaaggagagagttgcctcatctgtgatacaaccggatatcgggggcctcccggg
ccacagggacccccaggagaaataggtttcccaggacagccaggggccaagggcgacaga
ggtttgcctggcagagacggtgttgcaggagtgcctgggcctcaaggtacaccagggctg
atcggccagccaggagccaagggggagcctggtgagatttatttcgacctgcggctcaaa
ggtgacaaaggagacccaggctttccaggacagcccggcatgccagggagagcgggttct
cctggaagagatggccgtccgggtcttcctggccccaagggctcgccgggttctgtagga
ttgaaaggagagcgtggtccccctggaggagttggattcccaggcagtcgtggtgacacc
ggcccccctgggcctccaggatatggtcctactggtcccattggtgacaaaggacaagca
ggctttcctggaggccctgggtccccaggcctgccaggtccaaagggtgaaccaggaaaa
gttgttcctttaccaggcccccctggagcagaaggactgccggggtccccaggcttccca
ggtccccaaggagaccgaggctttcctggaaccccaggaaggccaggcctgccaggagag
aagggtgctgtgggccagccaggaattggatttccagggccccctggccccaaaggtgtt
gatggcttacctggagacatggggcctccagggactccaggtcgcccgggatttaatggc
ttacctgggaacccaggtgtgcagggccagaagggagagcctggagttggtctaccggga
ctcaaaggtttgccaggtcttcccggcattcctggcacacctggggagaaggggagcatt
ggggtaccaggcgttcctggagaacacggagcgatcggaccccctgggcttcaggggatc
agaggtgaaccggggcctcctggattgccaggctccgtggggtctccaggagttccagga
attggcccccctggagctaggggcccccctggaggacagggaccaccggggttgtcgggc
cctcctggaataaaaggagagaagggtttccccggattccccggactggacatgccaggc
cctaaaggagataaagggtctcaaggacttcctggcgtaacaggacagtcagggctccct
ggctttcctggacagcaggggtctcctgggattcctgggtttccaggttccaagggagaa
atgggcgtcatggggacccccgggcagccgggctcaccaggaccagtgggtgttccggga
ttaccgggtgaaaaaggggaccatggcttcccgggctcctcaggacccaggggagaccct
ggcctgaaaggtgataagggggatgtcggtctccctggcaagcctggctccatggataag
gtggacatgggcagcatgaagggccagaagggagaccaaggagaaaaaggacaaattgga
ccaattggtgagaaaggatcccgaggagaccctgggaccccaggagtgcctggaaaggat
gggcaggcaggacagcctgggcagccaggacctaaaggtgatccaggtataagtggaacc
ccaggtgctccaggacttccgggaccaaaaggatctgttggtggaatgggcttgccagga
acacctggagagaaaggtgtgcctggcatccctggcccacaaggttcacctggcttacag
ggagaaaaaggtgcaaaaggagcgaaagggcaggcaggcccacctggcataggcatccca
gggctgcctggtgaaaagggagatcaagggatagcgggtttcccaggaagccctggagag
aagggagaaaaaggaagcatcgggatcccaggaatgccagggtccccaggccttaaaggg
tctcctgggagtgttggctatccagggagccctgggctgcctggagaaaaaggtgacaaa
ggcctcccaggattggatggcatccctggtgtcaaaggagaagcaggtcttcctgggaca
cctggccccacaggcccagctggccagaaaggggagccaggcagtgacggaatcccgggc
tcggcaggagagaagggtgaaccaggtctaccaggaagaggattcccagggtttccaggg
gccaaaggagacaaaggttcaaagggtgaggtgggtttcccaggattagctgggagccca
ggaattcctggatccaaaggagagcaaggattcatgggtcctccagggccccagggacag
ccggggttaccaggatccccaggccatgccacggaggggcccaaaggagaccgtggacct
cagggccagcctggcttgccaggacttccgggacccatggggcctccagggcttcctggg
attgatggagttaaaggtgacaaaggaaatccaggctggccaggagcacccggtgtccca
gggcccaagggagaccctggattccagggcatgcctggcattggtggctctccaggaatc
acaggctctaagggtgatatggggcctccaggagttccaggatttcaaggtccaaaaggt
gttcctggcctccagggaattaaaggtgatcaaggcgatcaaggtgtcccgggagctaaa
ggtctcccgggtcctcctggccccccaggtccttacgacatcatcaaaggggagcccggg
ctccctggtcctgagggccccgcagggctgaaagggcttcagggacctccaggccccaaa
ggccagcaaggtgttacaggattggtgggtatacctggacctccaggtattcctgggttc
gatggtgcccctggccagaaaggagagatgggacctaccgggcctactggtccaagagga
tttccaggtccaccaggccccgatgggttgccagggtccatggggcccccaggcacccca
tctgttgatcacggcttccttgtgaccaggcacagtcaaacaatagatgatccacagtgt
ccttctgggaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaacgaa
cgggcccatggccaggacttgggcacggccggcagctgcctgcgcaagttcagcacaatg
cccttcctgttctgcaacattaacaacgtgtgcaactttgcatcacgaaatgactactca
tactggctgtccacccccgagcccatgcccatgtcaatggcacccatcacgggggacaac
ataagaccctttattagtaggtgtgctgtgtgtgaggcgcccgccatggtgatggccgtg
cacagtcagaccattcagatcccaccgtgccccagcgggtggtcctcgctgtggatcggc
tactcttttgtgatgcacaccagcgctggtgcagaaggctctggccaagccctggcatcc
cctggctcctgtctggaggagtttagaagtgcgccattcatcgagtgtcacggccgtggg
acctgtaattactacgcaaatgcttacagcttttggctcgccaccatagagaggagcgag
atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc
cgctgccaagtctgtatgagaagaacataa
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