Macaca thibetana thibetana (Pere David's macaque): 126954857
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Entry
126954857 CDS
T08579
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126954857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126954857
Enzymes [BR:
mthb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
126954857
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126954857
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126954857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
126954857
NCBI-ProteinID:
XP_050646798
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All DBs
Position
5:complement(129802499..129905888)
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AA seq
566 aa
AA seq
DB search
MNRYGKLSLCSFKLIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLS
TSLWSLTHLTALHLNDNYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLL
NNNLLRVLPYELGRLFQLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQL
PPRPWITLKERDQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIV
NCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKT
EKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAA
DKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCA
DLNSLPDSGVVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSA
YENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDH
FSLLTQLELHPPLLPLVNGVHLPNRR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatacggaaaactttctctctgctcctttaaactaatagggatgccaaaggaa
aaatatgatcctccagatcctcgcagaatttataccatcatgtcagcagaggaggtagcc
aatgggaaaaaatctcactgggcagaattagaaatctcgggtagagtgcggagcctaagt
acatcactttggtcattgacacacttgacagcgctgcacctaaatgacaattaccttagt
cgcattccacctgatattgccaagcttcataatctggtttacctggatctgtcatccaat
aaactcagaagtttaccagcagaactaggaaacatggtgtctctcagggaattgctttta
aataacaatctgttacgggttttgccttatgaacttggtcggctcttccagctacaaact
ctaggtttgaaaggcaatcctttatcacaggatattctcaacttataccaggacccagat
ggaacccgaaagctactgaacttcatgcttgacaatctcgcagttcatccagagcagctt
cctccgaggccatggattacattaaaagaacgagaccaaattctgccatcagcatcattc
acggttatgtgttacaatgtgttatgtgataaatacgctacccggcagctatatggctat
tgcccatcctgggcattaaactgggaatacaggaaaaagggaattatggaagaaattgtt
aactgtgacgcagatatcattagtcttcaggaagtggaaacagagcaatacttcactctc
tttctgccagcattgaaggagcgtggatatgatggatttttttctccaaagtcacgtgcc
aaaatcatgtctgagcaggagagaaagcatgtagatggttgtgcaatattcttcaaaaca
gaaaaatttacattggtgcagaagcatacagtggaatttaaccaagtggcgatggctaat
tcagatggatccgaagctatgctgaacagagtgatgacaaaagataatattggtgtcgct
gtggtattagaggtccacaaagaactatttggagcaggtatgaagcctattcatgctgca
gacaaacagctgcttatagtggcaaatgcccacatgcattgggacccagagtattctgat
gtgaagcttatccagaccatgatgtttgtctcagaggttaaaaacattctggagaaagcc
tctagtaggcctggcagcccaactgcagatcctaattccatcccgctggtgctatgtgca
gatcttaactcattgccagattcaggtgttgtggaatacttaagcaatggaggagtagct
gacaaccataaagacttcaaggaactaaggtacaatgagtgtcttatgaacttcagctgc
aatggaaagaatggaagctcagaagggagaatcacacatggcttccaacttaagagcgcc
tatgaaaataacttgatgccttacaccaattacacctttgatttcaaaggcgtgattgac
tacattttctattccaagactcatatgaacgtgcttggtgtcctggggcctttagatcct
caatggctggttgagaacaacatcactgggtgtccacaccctcacatcccttcagaccac
ttctcactgttaacacaacttgaactccaccctccactcctgcctcttgtcaatggtgtt
cacttgcctaatcggaggtag
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