KEGG   Methanosarcina thermophila CHTI-55: MSTHC_2356
Entry
MSTHC_2356        CDS       T03891                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mthe  Methanosarcina thermophila CHTI-55
Pathway
mthe03030  DNA replication
mthe03410  Base excision repair
mthe03420  Nucleotide excision repair
mthe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHC_2356
   03410 Base excision repair
    MSTHC_2356
   03420 Nucleotide excision repair
    MSTHC_2356
   03430 Mismatch repair
    MSTHC_2356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthe03032]
    MSTHC_2356
   03400 DNA repair and recombination proteins [BR:mthe03400]
    MSTHC_2356
Enzymes [BR:mthe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MSTHC_2356
    6.5.1.6  DNA ligase (ATP or NAD+)
     MSTHC_2356
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MSTHC_2356
DNA replication proteins [BR:mthe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSTHC_2356
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MSTHC_2356
DNA repair and recombination proteins [BR:mthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSTHC_2356
   NER (nucleotide excision repair)
    Other NER factors
     MSTHC_2356
   MMR (mismatch excision repair)
    Other MMR factors
     MSTHC_2356
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme HAD
Other DBs
NCBI-ProteinID: AKB16674
UniProt: A0A0E3NF90
LinkDB
Position
2891181..2892887
AA seq 568 aa
MTSFREFSETCQAIEKISSTIDTTNRVADFLKKVDVEELPIATHFIMSEVFPAWSGKQLG
IGISLLYAALSRASGMSVKSIESLLRTTGDIGDTTLLILKEKRKNQVTFSSFFEEQPELS
ITEVYNRFKIASEASGKGSQDIKIKNLQFLFNSSTPREAKYIARLALEELRIGVGEGVVR
DAIAKAFSVPVDVVEHAFMVTNDLGIVAATAKEGGIEALERLGIEINRPIRMMLSQISPD
IAADIREMGEAAIEWKFDGARLQIHKAGDSVTLFSRKLENVTNSLPDLVEIIRKHVKAES
AILDGEAVAVDKNGKPRAFQEILKRFRRKYHVEEKALGIPIQLNLFDIMYLNGKTLIDLP
LIERRKALESCVESSTEDSKSICVAKQVITGDLELIEQIYKEALKAGHEGLMVKNPNSVY
SPGKRGKNWIKKKPLMETLDLVIVGAEWGFGRRANLIGSYTVACYDPETGRFLQVGKVGT
GLTDDQLKELTEMLSDLMEGGEAGGVFAVRPKIVLEIAFEEIQKSPNYNSGFALRFPRFI
RIRDDKDPEEADTIQRIEKVYSQQLKRL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgacaagcttcagggaattttcagagacctgccaggcgattgagaagatctcaagtact
attgatactacaaatagagttgcggattttcttaaaaaggtcgatgtagaagaactgccc
attgcaactcattttattatgagtgaggtttttcctgcctggagtggaaagcagctggga
atcggaataagcctgctgtatgccgccctttccagagcttcgggaatgtctgtgaaaagc
atagaatctcttctacggactactggagatataggggacacaaccctgcttatccttaag
gaaaagaggaaaaatcaggttactttctcttctttcttcgaagagcagcccgaactctca
ataacggaggtttataaccgtttcaaaatcgcctcagaagcttcggggaaaggctcacag
gatatcaagataaaaaatcttcagtttctcttcaactcctcaacccccagggaagcaaaa
tatatcgccagacttgcccttgaggaactcaggatcggcgtcggtgaaggcgttgtaagg
gacgcgattgcaaaagctttctctgtgcctgtggacgtggtcgagcatgcctttatggtc
acaaacgacctcgggatagttgctgcaactgcaaaggaaggcggaatagaagcccttgaa
cgcctgggaatcgaaatcaatcgcccgattagaatgatgctttcccagatcagtcctgat
atagctgccgacatcagggaaatgggggaggctgcaattgaatggaagtttgatggggca
agactccagatccataaggctggagattcggttacgcttttttcacgcaaactcgaaaat
gttacgaattcccttcccgaccttgtggagataattcgcaagcacgtaaaagctgagtcg
gcaatccttgatggggaagccgtggctgtggacaaaaacggcaagcccagggcatttcag
gaaattctcaagcgtttcaggcgcaagtaccatgtggaagaaaaagccctcggcatccct
attcaactcaacctttttgacatcatgtacttaaacggaaaaaccctgatagacctgcct
ctcattgaaaggagaaaagcgcttgagtcctgtgttgaaagctcaactgaggactcaaaa
tcaatctgcgtagccaaacaggtgataaccggagacctcgaacttatagaacagatctac
aaggaggctttaaaagccgggcatgaaggtcttatggtcaaaaacccgaattcggtctat
tctcctggcaaacgcggcaaaaactggattaagaaaaaacctcttatggaaaccctcgac
cttgtaattgtgggagcggaatggggctttggcaggcgtgcaaaccttataggctcttat
actgttgcctgttatgatccagaaaccggtcgttttctccaggtaggcaaagtgggcacg
ggtctgactgacgatcagctaaaggagctcacagagatgctctctgacctcatggaaggc
ggagaggcaggcggagtatttgcagtacgcccaaaaatcgtccttgagatcgcctttgag
gaaatccagaaaagccccaattataactcaggctttgcattgcgtttcccgcgctttatc
cgcatccgggacgataaagacccggaagaagccgatacaatacagaggatagaaaaggta
tacagccagcagttgaaaaggctgtaa

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