Methanosarcina thermophila TM-1: MSTHT_1815
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Entry
MSTHT_1815 CDS
T03892
Name
(GenBank) RNA ligase, family
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MSTHT_1815
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GFIT
Motif
Pfam:
Lig_C
RNA_ligase
DNA_ligase_A_M
Pesticin_RB
TusA
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
AKB13573
UniProt:
A0A0E3NF67
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All DBs
Position
2219715..2220887
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AA seq
390 aa
AA seq
DB search
MSREGNEEVDPEFVSRLASYLGFNKERVQHLFEKSYLARNWGKYENLLRFDKEISHIERG
TVLYEKDGSFEAIVGFPKIRRAMVLNPTIKKHFSGLEKVAVEEKMNGYNVRIAIAKDEIL
AITRSGYICPYTTQKAKEKLNLKFFEDFPELVLYGEMVGPDNPYVPKEIYDIESVEFYIF
DIRKKNSGEPLPIKKRQEILEKYGFFQVRFFDEFPLETAAEEIEKIIRELGEIEHEGVVI
KDPDMMLSPLKYTSSQSNCSDLRHAFKFYNETGRDYMLSRIVREGFQTVEWDEDETEFEE
RCMKLGKSILGPLRESIRTVKNGQRLYEEARIRVRDLKTAADFEGYLKRLGIDAIFEEPQ
PIGDEYRIVIKKINKSTNDKTHAILQGETW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagagggtaatgaggaagtagatcctgaatttgtgtcccggcttgccagctat
ctagggtttaataaggaaagagttcaacatctttttgagaagagttatctcgcccgaaac
tggggaaaatatgaaaatttgctccgtttcgataaggaaatatcccatatcgaaagagga
acagtactttatgagaaagacggttctttcgaagccattgtgggctttccgaaaatccga
cgagctatggtgctgaatcctacgattaaaaaacacttcagcggacttgagaaagtagcc
gtggaagaaaaaatgaatggatataatgtccgtatagcgattgcaaaagatgaaatcctt
gcaattacacgaagcggatatatctgcccttatacgactcaaaaagcaaaagagaaattg
aacctgaagttctttgaagatttcccagagcttgtactctatggagaaatggtaggacct
gataacccatatgttccaaaagagatctatgatatcgaatctgtagaattttacatattt
gatatccggaagaaaaacagtggtgaacctcttccaataaaaaagaggcaggaaatcctg
gaaaaatatggttttttccaggtaaggtttttcgacgaattcccattggaaactgctgct
gaagaaattgaaaaaattattcgggaacttggagaaatagaacatgagggtgttgtaata
aaggacccagacatgatgctttccccgttaaaatatacctcttcacaaagtaattgttcg
gatctcaggcacgcctttaagttttacaatgaaacaggcagagattacatgctttcccga
attgtcagagaaggtttccagacagttgaatgggatgaggatgagaccgaatttgaagaa
cgctgtatgaaacttggaaaaagcatattgggccctctcagagaatctataagaactgtg
aaaaacggtcaaaggctatatgaagaggcaaggataagggtaagggacttaaaaactgca
gccgattttgagggataccttaaaagactcgggatcgatgcaatttttgaagagcctcaa
ccgatcggagacgagtatcggatagttataaagaagattaataaaagcaccaatgataag
actcatgcaatcttgcaaggtgagacgtggtaa
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