Moorella thermoacetica DSM 2955: MOTHA_c02740
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Entry
MOTHA_c02740 CDS
T06429
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mthz
Moorella thermoacetica DSM 2955
Pathway
mthz02020
Two-component system
mthz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mthz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MOTHA_c02740 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MOTHA_c02740 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthz03021
]
MOTHA_c02740 (rpoN)
Transcription machinery [BR:
mthz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MOTHA_c02740 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_17
HTH_23
MarR_2
HTH_IclR
HTH_Tnp_ISL3
Xre-like-HTH
Sigma70_r4_2
HTH_21
Sigma70_r4
HTH_3
HTH_Crp_2
Slx4
HTH_38
HTH_Tnp_4
HTH_AraC
Phage_CII
HTH_Tnp_Tc3_2
Motif
Other DBs
NCBI-ProteinID:
AKX95644
LinkDB
All DBs
Position
268328..269713
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AA seq
461 aa
AA seq
DB search
MREGLGLNLEQTQKLIMTPELRQAIVILQLSTLELADYIQQELQENPVLEVRDDGEVAAG
CESREENDSFDIDWQEYFQDGSDLGYVCEPREELPEWYPENFPTGQPTLQDHLLLQLQIA
ATNPRQVEIGSFLIGNLDSNGYLKISLKEAAALLKVPQADVWQVLDLIQHFDPPGVGARD
LVECLLLQLRQRGEAPAGTEKIIRGFLPDVAEGRLTRIARRLNMSLPAVQAAVDYIRSLD
PKPGRSFGGSLDNRYIVPDVIIERVGDEYVVLVNDLAMPRLGINPVYQALLRKEAACDPR
TRQFIERKLNAAAWLIRSLEQRRLTVYRVVNCLVKEQREFLDKGLKYLKPLTMRQVAAAL
GIHESTVSRATANKYVQTPQGVFELKFFFASGVEKRGGAAAAESIKKMISEAIGREDPAS
PLTDQQLQEMLQRQGIRISRRTVAKYRDEQGIPAAAKRKRY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaggtttaggccttaacctggaacagacgcaaaaattgatcatgacgccggaa
ttacgccaggccattgttatcctgcagctctccaccctggaactggccgactatatccag
caggaactccaggaaaacccggtcctggaagtgcgggacgacggcgaagtggcggccggc
tgtgaaagtcgggaggagaacgattccttcgatattgactggcaggaatatttccaggac
ggcagcgacctaggttatgtctgcgagccccgggaagaactgccggaatggtatccggag
aatttccctaccggccagcccaccttgcaggatcacctcctgctccagctgcagattgcc
gctaccaacccgcgccaggtggaaatcgggagtttcttaatcggcaacctggactctaac
ggttatttaaaaatcagcctcaaagaggcagccgccctgttaaaggtgccccaggctgac
gtctggcaggtcctggaccttatccagcactttgatccccccggcgtaggggcccgggac
ctggtggagtgcctgctgttacagctgcgccagaggggagaggccccggccgggacggaa
aaaatcattcgcggctttttgccggatgtggctgaagggcgcctgacccgcatcgcccgg
cgcctgaatatgagcctgccggccgtccaggcagcggtagactatattcgctccctggac
ccaaagccgggccgttcctttggcggcagcctggataaccgctatattgtccctgacgtc
attatcgaacgggtgggggacgagtatgtggtcctggtaaatgacctggctatgccccgg
ctgggaatcaacccggtttatcaggccctcctacgaaaggaggctgcctgtgacccccgg
accaggcagtttatcgaacgcaagctcaacgctgccgcctggctgatacgcagcctggag
cagcggcgcctgactgtttaccgggtagttaactgtctggtgaaggaacagcgggagttt
ctggataaaggactgaaatatttgaaacccctgaccatgcgccaggtagccgctgccctt
ggtatccacgaatccaccgtcagccgggctacagccaacaagtatgtccagacgccccag
ggggtttttgagctgaagtttttcttcgccagcggcgtcgagaagcgagggggcgcggcc
gctgccgagagcatcaaaaagatgatttctgaagccattggccgggaagaccctgcttcg
cccctgactgaccagcaactccaggagatgttgcagcgacagggtatccgcatctcccgg
cggacggttgccaagtaccgggacgagcagggcatcccggcggcggctaaaagaaaacga
tattag
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