Massilia oculi: DIR46_04870
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Entry
DIR46_04870 CDS
T05448
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
mtim
Massilia oculi
Pathway
mtim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DIR46_04870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_04870
DNA repair and recombination proteins [BR:
mtim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DIR46_04870
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DIR46_04870
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
HHH
FAM221
Motif
Other DBs
NCBI-ProteinID:
AWL03837
UniProt:
A0A2S2DER9
LinkDB
All DBs
Position
complement(1041684..1042274)
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AA seq
196 aa
AA seq
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MSTSLEFLIESLRRLPGVGPKSAQRMAFHLLQHDREGAAQLSRALYQAVDTVHHCAKCNT
FSDIEICELCADPERDHTLLCVVETPADQIMIEQTLTWRGLYFVLMGRLSPLDGIGPRDL
ALDKLVNRATDGVVGEVVLATNFTNEGEATAHYISEMLKARGLKVSRLARGVPVGGELEY
VDAGTIARAMLDRRSA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcgctcgaatttctcatcgaatcgctgcgccgcctgcctggcgtgggcccc
aagtcggcccagcgcatggcattccacctgctgcagcacgaccgcgagggcgccgcgcaa
ctgtcgcgcgcgctctaccaggcggtcgacacggtgcaccattgcgccaagtgcaatacc
ttctccgacattgaaatttgcgagctgtgcgccgacccggagcgcgaccacaccctgctg
tgtgtggtcgagaccccggccgaccagatcatgatcgagcagacgctcacctggcgcggc
ctgtatttcgtgttgatgggccggctgtcgccgctggacggcatcggcccgcgcgacctc
gccctggacaagctcgtcaaccgcgccaccgatggcgtcgtcggcgaagtggtgctcgcg
accaatttcaccaacgagggcgaagccaccgcccactacatcagcgaaatgctcaaggcg
cgcggcctcaaggttagccgcctggcgcgtggcgtgccggtaggcggtgaactcgagtat
gtcgacgccggcacgatcgcgcgcgccatgctcgatcgacgaagcgcatga
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