KEGG   Massilia oculi: DIR46_18630
Entry
DIR46_18630       CDS       T05448                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mtim  Massilia oculi
Pathway
mtim00010  Glycolysis / Gluconeogenesis
mtim00020  Citrate cycle (TCA cycle)
mtim00260  Glycine, serine and threonine metabolism
mtim00280  Valine, leucine and isoleucine degradation
mtim00310  Lysine degradation
mtim00380  Tryptophan metabolism
mtim00620  Pyruvate metabolism
mtim00630  Glyoxylate and dicarboxylate metabolism
mtim00640  Propanoate metabolism
mtim00785  Lipoic acid metabolism
mtim01100  Metabolic pathways
mtim01110  Biosynthesis of secondary metabolites
mtim01120  Microbial metabolism in diverse environments
mtim01200  Carbon metabolism
mtim01210  2-Oxocarboxylic acid metabolism
mtim01240  Biosynthesis of cofactors
Module
mtim_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mtim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mtim_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mtim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mtim_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DIR46_18630 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DIR46_18630 (lpdA)
   00620 Pyruvate metabolism
    DIR46_18630 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DIR46_18630 (lpdA)
   00640 Propanoate metabolism
    DIR46_18630 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DIR46_18630 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DIR46_18630 (lpdA)
   00310 Lysine degradation
    DIR46_18630 (lpdA)
   00380 Tryptophan metabolism
    DIR46_18630 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DIR46_18630 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtim04147]
    DIR46_18630 (lpdA)
Enzymes [BR:mtim01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DIR46_18630 (lpdA)
Exosome [BR:mtim04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DIR46_18630 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox GIDA FAD_oxidored Pyr_redox_3 NAD_binding_8 DAO Biotin_lipoyl_2 AlaDh_PNT_C FAD_binding_2 FAD_binding_3 Thi4 GCV_H HI0933_like 3HCDH_N
Other DBs
NCBI-ProteinID: AWL06251
UniProt: A0A2S2DLR4
LinkDB
Position
4127311..4129137
AA seq 608 aa
MSTVEVKVPNIGDFKDVEVIELMVKAGDTIKVDQSLITVESDKASMEIPSTHAGVVKDIA
VKVGDKINEGTLLLTVEESGSGAAAPAAEKATEKPAEKPAEKPAAPTESQAPAKPAPAPA
AAAPAPNASSYSGQVDIECEMMVLGAGPGGYSAAFRAADLGMNTVLVEKYATLGGVCLNV
GCIPSKALLHVAHIMDETAHMADLGVSFAKPQVDIDKLRAHKDGVIKKMTGGLAFMAKAR
KVNVVQGVGQFLSPNHIEVTGPDGGKKVVAFKKAIIAAGSSVVKLPFVPEDPRIVDSTGA
LELRQVPKKMLVIGGGIIGLEMATVYSSLGSRIDVVEMMDGLMQGADREAVKVWQKFNAH
RFDNIMLKTKTVGVEALPEGIKVTFEAAEAGATSPEPQLYDLVLVAVGRSPNGKKIAADK
AGVTVSDRGFIAVDSQMRTNVPHIFAIGDLVGQPMLAHKAVHEAHVAAEAALDKKTHFDA
KVIPSVAYTDPEVAWVGLTEDEARQKGIKVEKGHFPWNASGRAVANGRDEGFTKLLFDAE
THRIVGGTIVGTNAGDMIGEIALAIEMGADGVDIGKTIHPHPTLGESIGMAAEAYEGVCT
DLPPPKKR
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgagcactgttgaagtgaaagtcccgaacatcggcgacttcaaggacgtcgaagtgatc
gagctgatggtcaaggccggcgacacgatcaaggtcgaccagtccctgatcaccgtcgaa
tcggacaaggccagcatggagatcccatcgacccacgcgggcgtggtgaaggacatcgcg
gtcaaggtcggtgacaagatcaatgaaggcacgctgctgctgacggtggaagagtcgggc
tccggcgctgccgcgcctgcggctgaaaaagctaccgagaagccggccgaaaagccagcc
gaaaagccagccgcgccgaccgaatcgcaagcgccagccaagccggcgcctgctccggcc
gctgccgctcctgcgccgaatgcgtcgagctactcgggccaggtcgacatcgaatgcgag
atgatggtgctgggcgcgggccctggcggctattcggccgccttccgcgccgccgacctc
ggcatgaacaccgtgctggtcgagaagtacgcgaccctgggcggcgtgtgcctgaacgtc
ggttgcattccatcgaaggcgctactgcacgtggcgcacatcatggatgaaaccgcgcac
atggcggacctgggcgtctcgttcgccaagccgcaggtcgacatcgacaagctgcgcgcg
cacaaggatggcgtgatcaagaagatgaccggcggcctggccttcatggccaaggcgcgc
aaggtcaatgtggtgcagggtgtgggccagttcctgagcccgaaccacatcgaagtcacc
ggtcccgatggcggcaagaaggtcgtcgccttcaagaaggcgatcatcgcggccggttcg
tcggtcgtcaagctgccgttcgtgccggaagatccgcgcatcgtcgattcgaccggcgcg
ctggagctgcgccaggtgccgaagaagatgctggtcatcggcggaggcatcatcggcctg
gaaatggcgaccgtctattcgtcgctgggttcgcgcatcgacgtggtcgagatgatggac
ggcctgatgcagggcgctgatcgcgaggccgtcaaggtctggcagaagttcaatgcccac
cgcttcgacaacatcatgctgaaaacgaaaaccgtcggcgtggaagcgctgccggaaggg
atcaaggtcaccttcgaagcggccgaagcgggcgccacttcgccggaaccgcagctgtac
gacctggtgctggtggccgtgggccgcagcccgaacggcaagaagatcgccgccgacaag
gccggcgtgacggtgagcgatcgcggcttcatcgcggtcgacagccagatgcgcaccaat
gtgccgcacatcttcgccatcggcgacctggtgggccagccgatgctggcgcacaaggcg
gtgcacgaggcgcacgtggcggccgaagcggccctggacaagaagacccacttcgacgcc
aaggtcattccgtcggtcgcgtacaccgatcccgaagtggcatgggtcggcctcaccgag
gatgaagccaggcagaagggcatcaaggtcgagaagggccacttcccgtggaacgccagc
ggccgcgcggtcgccaacggccgcgacgaaggcttcaccaagctgctgttcgacgccgag
acgcaccgcatcgtcggcggcaccatcgtcggcaccaatgccggcgacatgatcggcgag
atcgcgctggcgatcgagatgggcgcggacggcgtggacatcggcaagaccatccacccg
cacccgaccctgggcgagtcgatcggcatggcggcggaggcctacgaaggcgtctgcacc
gatttgccgccgccgaagaagcgctaa

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