Massilia oculi: DIR46_18630
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Entry
DIR46_18630 CDS
T05448
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mtim
Massilia oculi
Pathway
mtim00010
Glycolysis / Gluconeogenesis
mtim00020
Citrate cycle (TCA cycle)
mtim00260
Glycine, serine and threonine metabolism
mtim00280
Valine, leucine and isoleucine degradation
mtim00310
Lysine degradation
mtim00380
Tryptophan metabolism
mtim00620
Pyruvate metabolism
mtim00630
Glyoxylate and dicarboxylate metabolism
mtim00640
Propanoate metabolism
mtim00785
Lipoic acid metabolism
mtim01100
Metabolic pathways
mtim01110
Biosynthesis of secondary metabolites
mtim01120
Microbial metabolism in diverse environments
mtim01200
Carbon metabolism
mtim01210
2-Oxocarboxylic acid metabolism
mtim01240
Biosynthesis of cofactors
Module
mtim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mtim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mtim_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
mtim_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mtim_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DIR46_18630 (lpdA)
00020 Citrate cycle (TCA cycle)
DIR46_18630 (lpdA)
00620 Pyruvate metabolism
DIR46_18630 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DIR46_18630 (lpdA)
00640 Propanoate metabolism
DIR46_18630 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DIR46_18630 (lpdA)
00280 Valine, leucine and isoleucine degradation
DIR46_18630 (lpdA)
00310 Lysine degradation
DIR46_18630 (lpdA)
00380 Tryptophan metabolism
DIR46_18630 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DIR46_18630 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtim04147
]
DIR46_18630 (lpdA)
Enzymes [BR:
mtim01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DIR46_18630 (lpdA)
Exosome [BR:
mtim04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DIR46_18630 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
GIDA
FAD_oxidored
Pyr_redox_3
NAD_binding_8
DAO
Biotin_lipoyl_2
AlaDh_PNT_C
FAD_binding_2
FAD_binding_3
Thi4
GCV_H
HI0933_like
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AWL06251
UniProt:
A0A2S2DLR4
LinkDB
All DBs
Position
4127311..4129137
Genome browser
AA seq
608 aa
AA seq
DB search
MSTVEVKVPNIGDFKDVEVIELMVKAGDTIKVDQSLITVESDKASMEIPSTHAGVVKDIA
VKVGDKINEGTLLLTVEESGSGAAAPAAEKATEKPAEKPAEKPAAPTESQAPAKPAPAPA
AAAPAPNASSYSGQVDIECEMMVLGAGPGGYSAAFRAADLGMNTVLVEKYATLGGVCLNV
GCIPSKALLHVAHIMDETAHMADLGVSFAKPQVDIDKLRAHKDGVIKKMTGGLAFMAKAR
KVNVVQGVGQFLSPNHIEVTGPDGGKKVVAFKKAIIAAGSSVVKLPFVPEDPRIVDSTGA
LELRQVPKKMLVIGGGIIGLEMATVYSSLGSRIDVVEMMDGLMQGADREAVKVWQKFNAH
RFDNIMLKTKTVGVEALPEGIKVTFEAAEAGATSPEPQLYDLVLVAVGRSPNGKKIAADK
AGVTVSDRGFIAVDSQMRTNVPHIFAIGDLVGQPMLAHKAVHEAHVAAEAALDKKTHFDA
KVIPSVAYTDPEVAWVGLTEDEARQKGIKVEKGHFPWNASGRAVANGRDEGFTKLLFDAE
THRIVGGTIVGTNAGDMIGEIALAIEMGADGVDIGKTIHPHPTLGESIGMAAEAYEGVCT
DLPPPKKR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgttgaagtgaaagtcccgaacatcggcgacttcaaggacgtcgaagtgatc
gagctgatggtcaaggccggcgacacgatcaaggtcgaccagtccctgatcaccgtcgaa
tcggacaaggccagcatggagatcccatcgacccacgcgggcgtggtgaaggacatcgcg
gtcaaggtcggtgacaagatcaatgaaggcacgctgctgctgacggtggaagagtcgggc
tccggcgctgccgcgcctgcggctgaaaaagctaccgagaagccggccgaaaagccagcc
gaaaagccagccgcgccgaccgaatcgcaagcgccagccaagccggcgcctgctccggcc
gctgccgctcctgcgccgaatgcgtcgagctactcgggccaggtcgacatcgaatgcgag
atgatggtgctgggcgcgggccctggcggctattcggccgccttccgcgccgccgacctc
ggcatgaacaccgtgctggtcgagaagtacgcgaccctgggcggcgtgtgcctgaacgtc
ggttgcattccatcgaaggcgctactgcacgtggcgcacatcatggatgaaaccgcgcac
atggcggacctgggcgtctcgttcgccaagccgcaggtcgacatcgacaagctgcgcgcg
cacaaggatggcgtgatcaagaagatgaccggcggcctggccttcatggccaaggcgcgc
aaggtcaatgtggtgcagggtgtgggccagttcctgagcccgaaccacatcgaagtcacc
ggtcccgatggcggcaagaaggtcgtcgccttcaagaaggcgatcatcgcggccggttcg
tcggtcgtcaagctgccgttcgtgccggaagatccgcgcatcgtcgattcgaccggcgcg
ctggagctgcgccaggtgccgaagaagatgctggtcatcggcggaggcatcatcggcctg
gaaatggcgaccgtctattcgtcgctgggttcgcgcatcgacgtggtcgagatgatggac
ggcctgatgcagggcgctgatcgcgaggccgtcaaggtctggcagaagttcaatgcccac
cgcttcgacaacatcatgctgaaaacgaaaaccgtcggcgtggaagcgctgccggaaggg
atcaaggtcaccttcgaagcggccgaagcgggcgccacttcgccggaaccgcagctgtac
gacctggtgctggtggccgtgggccgcagcccgaacggcaagaagatcgccgccgacaag
gccggcgtgacggtgagcgatcgcggcttcatcgcggtcgacagccagatgcgcaccaat
gtgccgcacatcttcgccatcggcgacctggtgggccagccgatgctggcgcacaaggcg
gtgcacgaggcgcacgtggcggccgaagcggccctggacaagaagacccacttcgacgcc
aaggtcattccgtcggtcgcgtacaccgatcccgaagtggcatgggtcggcctcaccgag
gatgaagccaggcagaagggcatcaaggtcgagaagggccacttcccgtggaacgccagc
ggccgcgcggtcgccaacggccgcgacgaaggcttcaccaagctgctgttcgacgccgag
acgcaccgcatcgtcggcggcaccatcgtcggcaccaatgccggcgacatgatcggcgag
atcgcgctggcgatcgagatgggcgcggacggcgtggacatcggcaagaccatccacccg
cacccgaccctgggcgagtcgatcggcatggcggcggaggcctacgaaggcgtctgcacc
gatttgccgccgccgaagaagcgctaa
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