Mycobacterium tuberculosis CCDC5180: CCDC5180_0004
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Entry
CCDC5180_0004 CDS
T01992
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
mtl
Mycobacterium tuberculosis CCDC5180
Pathway
mtl03030
DNA replication
mtl03430
Mismatch repair
mtl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCDC5180_0004
03430 Mismatch repair
CCDC5180_0004
03440 Homologous recombination
CCDC5180_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtl03032
]
CCDC5180_0004
03400 DNA repair and recombination proteins [BR:
mtl03400
]
CCDC5180_0004
Enzymes [BR:
mtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCDC5180_0004
DNA replication proteins [BR:
mtl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCDC5180_0004
DNA repair and recombination proteins [BR:
mtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCDC5180_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
SEF14_adhesin
Motif
Other DBs
NCBI-ProteinID:
AEJ48841
LinkDB
All DBs
Position
3410..4618
Genome browser
AA seq
402 aa
AA seq
DB search
MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD
YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT
MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA
TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL
GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME
FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG
KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggctacgacaagagttggcctcaccgacttgacgtttcgtttgctacgagag
tctttcgccgatgcggtgtcgtgggtggctaaaaatctgccagccaggcccgcggtgccg
gtgctctccggcgtgttgttgaccggctcggacaacggtctgacgatttccggattcgac
tacgaggtttccgccgaggcccaggttggcgctgaaattgtttctcctggaagcgtttta
gtttctggccgattgttgtccgatattacccgggcgttgcctaacaagcccgtagacgtt
catgtcgaaggtaaccgggtcgcattgacctgcggtaacgccaggttttcgctaccgacg
atgccagtcgaggattatccgacgctgccgacgctgccggaagagaccggattgttgcct
gcggaattattcgccgaggcaatcagtcaggtcgctatcgccgccggccgggacgacacg
ttgcctatgttgaccggcatccgggtcgaaatcctcggtgagacggtggttttggccgct
accgacaggtttcgcctggctgttcgagaactgaagtggtcggcgtcgtcgccagatatc
gaagcggctgtgctggtcccggccaagacgctggccgaggccgccaaagcgggcatcggc
ggctctgacgttcgtttgtcgttgggtactgggccgggggtgggcaaggatggcctgctc
ggtatcagtgggaacggcaagcgcagcaccacgcgacttcttgatgccgagttcccgaag
tttcggcagttgctaccaaccgaacacaccgcggtggccaccatggacgtggccgagttg
atcgaagcgatcaagctggttgcgttggtagctgatcggggcgcgcaggtgcgcatggag
ttcgctgatggcagcgtgcggctttctgcgggtgccgatgatgttggacgagccgaggaa
gatcttgttgttgactatgccggtgaaccattgacgattgcgtttaacccaacctatcta
acggacggtttgagttcgttgcgctcggagcgagtgtctttcgggtttacgactgcgggt
aagcctgccttgctacgtccggtgtccggggacgatcgccctgtggcgggtctgaatggc
aacggtccgttcccggcggtgtcgacggactatgtctatctgttgatgccggttcggttg
ccgggctga
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