Thermothelomyces thermophilus: MYCTH_2081249
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Entry
MYCTH_2081249 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mtm
Thermothelomyces thermophilus
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtm03009
]
MYCTH_2081249
Enzymes [BR:
mtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCTH_2081249
Ribosome biogenesis [BR:
mtm03009
]
Eukaryotic type
Pre-60S particles
Helicases
MYCTH_2081249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GST_N
GST_N_2
GST_C
GST_C_2
Helicase_C
ResIII
GST_N_3
GST_C_3
FAM110_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
11513749
NCBI-ProteinID:
XP_003664118
JGI:
2081249
UniProt:
G2QHL3
LinkDB
All DBs
Position
4:complement(join(2098312..2098594,2098703..2098790,2098888..2099106,2099250..2099454,2099524..2100207,2100348..2100668,2101246..2101255,2101369..2101803,2101877..2102198,2102275..2102329))
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AA seq
873 aa
AA seq
DB search
MAEPTGLVAKSGIELLTFGTPNGFKASILLEELKEAYGKEYTYQSINISKNTQKEPWYTA
LNPNGRIPTIIDHDRNGFAVFEGLAILTYLTRHYDPEYKFSFPVDSDDYSVAEQWISWQH
GGIGPMQGQAGHFLRAAPEKIAWGITRYVGETERLYGILNARLADRDYIVGPGRGKYSIA
DISLIGWVNASLYAGIDLASQFPNVRAWLDRLLARPAVQKGLTVPSGQPSRFSVPTAERA
LKGEPGLEDVKDSLEATKKLVADAKEKYNYKLSERKLDKNDEPVAAAPEPETETEPKTES
KPSQPEKQAAETEPSFAELGLDPRLVQAIAKQNFEKPTLVQRKAIPLALKGQDVLCKAKT
GSGKTAAYVLPVLSTILKRKAVDPTPFTAALILVPTRELADQVFKAIEQFSAFCAKDIHA
ARLTENVSDAVQRSLLANVPDVVVSTPARAWHSVSSSALSLAKLQHLVLDEADLVLSYGY
DEDMENISRSLPKGVQTIMMSATLSAELDALKGIFCRNPTVLDLHEEFGAEDEKLTQFYV
KCSEEDKWLISYLIFKLQLIKGPCLIFVADIDRSYRLKLFFEQFSIRSCVLNSELPINTR
IKIIEEFNRGIYDIIIASDEKSELFGDEAADAEEEKKKKKQKQKSNSNDEAEKKDEGAEQ
PKKKRRYKKDEEYGVSRGRTARAGRAGIALSFVVPKELHGKHKPTTIKSTEKDEKVLAKV
MRQQAKLNRKLEPYNFNKSQMEAFRYRMNDALRAVTKVAIREARTKELRQELLRSEALKR
YFEENPTELAHLRHDGELGHATRQQPHLKHVPDYLLPKEGKKALASEQIGFVPLKKLDGK
DRRHRKGKPKGRSFKVGGKKDPLKTFKVRRKAR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacccaccggcctcgttgccaagtcgggcattgaactcttgacctttggcacc
cctaacggcttcaaagcttctatcctgttggaggagctgaaagaagcctacggcaaggag
tacacctaccagtccatcaacatcagcaagaacacccagaaggagccctggtacacggcg
ctcaaccccaatgggcgcatcccgaccatcatcgaccacgatcgcaacggcttcgccgtc
tttgaggggttggccatcctgacctacctcacgcgccactatgacccggagtacaagttc
agctttccggtcgactcggacgactactcggtcgccgagcagtggatctcctggcaacac
ggcgggataggtcccatgcaaggccaagcgggacacttcctccgcgcggctcctgagaag
atcgcctggggcatcacgcgctacgttggcgagacagagcggctgtacggcatcctcaac
gcgcggctcgccgatcgcgactacatcgttggcccgggcaggggcaagtacagtatcgcc
gacatcagcttgattgggtgggtcaatgccagcctgtacgcgggcatcgacctcgcgtcc
cagttccccaacgtgagggcttggctcgacaggctactggcgaggccggccgtgcagaag
ggcctcaccgtgcctagcgggcagccgtcgcgcttcagcgtccccaccgccgagagggct
ctgaagggcgagccggggctcgaggacgtcaaggattcgttggaggcgacgaagaagctg
gtcgccgacgcgaaggagaagtacaactacaaattgtcagaacggaaactggacaagaac
gatgagcccgtggcggccgcgcccgagcccgaaaccgagaccgagcccaagacggaaagc
aagcctagccaacccgagaaacaagcagccgaaacggaaccctcgttcgccgaacttggc
ctcgacccgcgtctggtgcaggccattgcaaagcagaacttcgaaaagcccaccctcgtc
cagcgcaaggccattccgctcgccctgaaaggacaagatgtgctgtgcaaagccaagacg
ggttccgggaagacggcagcctacgtgctccccgttctttccaccatcttgaagcgcaaa
gccgtcgatcccacccccttcaccgccgcgctcatcctcgtccccacccgcgagctcgcc
gaccaggtcttcaaggccatcgagcagttctcggccttctgcgccaaggacatccacgcc
gccaggctgaccgagaatgtgtccgacgccgtccagcgctcgctcctcgccaacgtccca
gacgtggtcgtctccacccccgcccgcgcctggcacagcgtcagctcgtccgccctctcc
ctcgcgaagctgcagcacctcgtccttgacgaggccgacctggtactgtcgtacggctac
gacgaggacatggagaacatctcgcgctcgctgcccaagggcgtccagaccatcatgatg
agcgccaccctgtccgccgagctggacgcgctcaagggcatcttctgccgcaacccgacc
gtgctggatctgcacgaggagttcggagccgaggacgagaagctgacacagttctacgtc
aagtgctcggaggaagacaagtggctgatctcgtacctcatcttcaagctccagctcatc
aagggcccctgtctcatctttgtcgccgacattgatcgctcgtaccggttgaagctcttc
tttgagcagtttagcatcaggagctgcgtcctcaactcggagctgccgatcaatactcgg
atcaagatcatcgaggaattcaaccgggggatatacgacatcattatcgcctcggacgag
aagagcgagctgtttggagacgaggctgcggatgcggaagaagaaaagaagaagaagaag
cagaagcagaagtcgaattccaatgacgaggcggagaagaaggacgagggcgcagagcaa
ccaaagaagaagcggcggtataaaaaggacgaagaatacggcgtgtctcgaggacgcacc
gccagggcagggcgcgccggtatcgcgctctccttcgtcgttcccaaggaacttcatggc
aagcacaagccaaccaccatcaagagcaccgagaaggacgaaaaggtcctggctaaggtc
atgcgccaacaggcgaagctcaaccggaaactggagccgtacaacttcaacaagtcgcag
atggaggccttcagataccgcatgaacgatgcactgcgcgccgtcacaaaggtggcgatc
cgggaggcgaggacgaaggaactacggcaagagctcctgaggagcgaggcgttgaagcgc
tacttcgaggagaacccgaccgagctcgcccacctgaggcacgacggggaactgggccat
gccacacggcagcagccacatctcaagcacgtcccagactacctgctcccgaaggaaggg
aagaaggcgttggcgtcggagcagatcggcttcgtgccgctcaagaagctagacgggaag
gacaggaggcaccgaaagggcaagcccaagggcaggtcgttcaaggttggcgggaaaaag
gacccgctcaagacgttcaaggttcggcgaaaggccaggtga
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