Thermothelomyces thermophilus: MYCTH_2306966
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Entry
MYCTH_2306966 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03015
mRNA surveillance pathway
mtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCTH_2306966
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2306966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2306966
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2306966
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MYCTH_2306966
mRNA cycle factors
Stress granule specific factors
MYCTH_2306966
Spliceosome [BR:
mtm03041
]
Complex C
Other components
Complex C specific factors
MYCTH_2306966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
Nup35_RRM
YflT
Motif
Other DBs
NCBI-GeneID:
11514080
NCBI-ProteinID:
XP_003664293
JGI:
2306966
UniProt:
G2QF19
LinkDB
All DBs
Position
4:complement(join(2713691..2713853,2713908..2716108))
Genome browser
AA seq
787 aa
AA seq
DB search
MAAPAAPGAVDQLAADLANTNLNGGDNRAPAINSNVASGESQTAEPDTAGPTPSSSAPHP
QSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEK
ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS
CKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEM
KANYTNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQEGKSRGFGFVNFSTHDSAAK
AVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARAEKANKYQGVNLYIKNLADDID
DDKLRQMFSEFGPITSAKVMRDNPPDHHHSADKEGKDKENKKEGEQEAKKEGKEEGEKDG
EAKEGEKKTEKKPERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVEGKPLYVALAQRKD
VRKSQLEASIQARNQLRMQQAAAQAGLPQQYMQAPIYYAPGQQPNFMPPGGRGMPFPQAG
LGMPAVQGGRPGQFPPYAQQGGRGAIPPQQIPLYPLGQFPPGAYGQPTNPQFLAAIQQVQ
QQAANLGGRGAPGGRGMQGMPVPQGMPGGPGMAGFPPNGRPQNGAIGGRGGPNRGGNFAA
GRGGVPPAGPLGGAGELNATSLLQSQLAATSNPQQQKQILGENLFPKIQALQPELAGKIT
GMLLEMDNNELVNLLEDETALVAKVNEAMAVYDEYVKSQQAAGQGSAPAQGEVEAEKPKE
EKTEEKA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcccgctgctcctggcgctgttgaccagcttgccgctgacctcgccaacacg
aacctcaacggtggcgataaccgggcccctgccatcaattccaatgtggcttctggcgag
tcccagactgccgaacccgatacggctgggcctaccccgagctcctctgctcctcatcct
cagtcttccgcgtctctctacgtcggcgaactggacccctctgtgaccgaggccatgctc
tttgagctgttctcccagattggttccgtcgcttcgatccgcgtctgccgtgatgctgtc
actcgtcgctccctcggatatgcctacgtcaactataactcgaccgccgatggcgagaag
gctctcgaagagctgaactacaccttgatcaagggccgcccctgccgcattatgtggtcc
cagcgcgatcccgctctgcgcaagaccggccagggcaatgtcttcatcaagaacctggac
actgcgattgacaacaaggcgcttcacgacacctttgctgctttcggtaacatccttagc
tgcaaggtggcccaagacgagaacggcaactccaagggctatggtttcgtgcactacgag
accgacgaagccgccgctcaggctatcaagcacgtcaacggcatgcttctgaacgagaag
aaggtctacgttggctaccacatccccaagaaggaccgccagagcaagttcgaggagatg
aaggccaactacaccaacgtctatgtcaagaacatcaacctcgaggtcactgaagaggag
ttccgcgagctcttttccaagtatggcgaggtcacgtcgtcaaccctcgctcgcgaccag
gagggcaagagccgtggcttcggcttcgtcaacttctccacccacgacagtgccgccaag
gctgttgaggagctcaatggcaaggagttccgtggtcaggagctctatgtcggtcgtgct
cagaagaagcacgagcgcgaggaggagcttaggaaatcttacgaggccgctcgcgctgag
aaggccaacaaataccaaggcgtcaacctgtatatcaagaatctggccgacgacatcgac
gatgacaagctgcgccagatgttctccgagtttggccccatcacctcggccaaggtcatg
cgcgacaaccccccggatcatcaccactctgcggataaggagggtaaggacaaggagaac
aagaaggagggcgagcaagaagccaagaaggagggcaaggaggagggcgagaaggacggt
gaggctaaggagggtgagaagaagaccgaaaagaagcctgaacgcaagctgggcaagagc
aagggcttcggcttcgtctgcttcagcaaccccgacgatgcgaccaaggccgttgccgag
atgaatcagcgcatggttgaaggcaagccgctctatgtcgccctcgctcagcgaaaggac
gtccgcaagagtcagcttgaggctagcatccaggcccgcaaccaactgcgcatgcagcaa
gccgccgctcaggccggtctgccgcagcagtacatgcaggcccctatctactatgctcct
ggccagcagcccaacttcatgcctcccggcggtcgcggcatgcccttccctcaggcgggt
ctcggcatgcctgccgtgcagggcggccgtccaggtcagttcccgccttatgctcagcag
ggcggtcgtggcgccatccctcctcagcagattcccctctatcctctgggccagttccct
cctggcgcctatggtcagccgaccaacccgcagttcctcgctgccattcagcaggttcag
cagcaggctgccaacctcggcggacgtggcgcgcccggtggacggggtatgcaaggcatg
cctgttcctcagggaatgcctggcggccctggcatggctggcttcccgcctaatggtagg
cctcagaatggcgcaatcggtggtcgtggcggccctaaccgcggtggcaactttgccgct
ggccgcggtggcgtgcctcctgccggtcctcttggcggtgctggtgagcttaatgctact
tctctcctgcagtcgcagctcgccgccaccagcaacccccagcagcagaagcagattctc
ggagagaatctcttccccaagatccaagccctccaaccagagctggctggcaagatcact
ggcatgctgctggagatggacaacaatgagctcgtaaatctgctcgaggacgagactgct
cttgtcgccaaggtcaacgaggccatggctgtctacgacgagtacgtcaagtcgcagcag
gctgccggtcaaggctcagctcccgcccagggcgaggtggaggctgagaagcccaaggag
gagaagaccgaggagaaggcttag
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integrated database retrieval system
