Thermothelomyces thermophilus: MYCTH_2311559
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Entry
MYCTH_2311559 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03013
Nucleocytoplasmic transport
mtm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCTH_2311559
03015 mRNA surveillance pathway
MYCTH_2311559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2311559
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MYCTH_2311559
mRNA cycle factors
P-body specific factors
MYCTH_2311559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Serglycin
Borrelia_orfA
Motif
Other DBs
NCBI-GeneID:
11506795
NCBI-ProteinID:
XP_003666666
JGI:
2311559
UniProt:
G2QPA8
LinkDB
All DBs
Position
7:join(942334..942581,942664..944584)
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AA seq
722 aa
AA seq
DB search
MVMSTPQLLARKTNGGATDGQSSNDAPKAPKAKAPPQGEKVVVRRLPPGMTEDEFVTILG
DEWKVGGPKVDWFSYWPGKVSRHPSKPSRPSRAYLHVIRRDDLTALLQRVQTATWEDAKE
TYNDPALLSLPTVEFAAYKKIPGDKKRVDGRQGTIDQDPEFMAFLEALANPDAPKEVQEV
EPPAEDPAKAEKTMTTPLVEYLKEKKAAKAKEAAAAKSAKHARQDSQGAKGKNAAPAPEE
SKKRSRESRSEREKASEKASDKASERPRESVKILTKKAAAAVEAAAEAAKTVAAQTRSAA
SSTSNPQPGGQDAPPKNRKAGVAAAALILQRDLGLSPKNAHRKARQEAAKEAAREGAKEA
AKAESEAKATTKENPKPAAPATSETAPPAAPTEPPASSTPAKTQQPASGKSRNRKRGAGE
DNSKTKGEANGGKPTDTPATASAKPPVTVLKKKDSQRSQSPQAQTTPASTGQPSKAGQSA
QATSQTAPSSTKSASQKQSGGSKKANAPATPSPGATRAFVKHANHSQGVTEAVLRDVMQT
FGTVTNIEIDRKKGFAYVDFGDHSGLAKAMAASPVTVAQATVQVLERKEMAKKGSGSGSG
SGSGSGSGSAQGKNAAAAATASPAATPAPGAAKTPGPASAEQNSGARAPEKAGGSAPEKA
GEQQPSKRSGRRRGGRGRGDREAKEAKDSSKDGGGGVKKGGDGGGGGGGGGGAGSAASAA
AT
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgagcacccctcagctgttggccaggaaaacgaatggcggtgcaacagatggt
cagtcctccaacgatgcgccaaaagctcccaaggccaaggcgccgccccagggcgagaag
gtagtcgttaggcgtctaccgccagggatgaccgaggacgagtttgtcaccatcttgggc
gatgaatggaaggttggagggcccaaggtcgactggttctcatactggcccggaaaggtg
tcgcgccatccctcgaaaccctcgcggccatcgcgcgcatacctccatgtcatcaggaga
gacgacttgacggcgctgctgcagagggtgcaaacggcaacgtgggaagatgcgaaagag
acatacaacgacccagccctgctttctctccccaccgtcgagtttgccgcctacaagaaa
atccccggcgacaagaagcgcgttgatgggcggcaaggcacaatcgaccaagacccggag
tttatggcatttctcgaggctctggccaaccccgatgcgccaaaagaggttcaggaagtt
gagccacctgccgaggatcccgccaaggcggagaagaccatgacaacacccttggtcgaa
tatctcaaggagaagaaggcggctaaggccaaagaggcggctgcggccaagagcgcgaag
catgcccgccaggattcccagggtgctaagggcaagaatgccgccccggcaccggaggag
tccaagaagaggtctcgggaaagcagaagtgagagagagaaggcatcggaaaaggcatca
gacaaggcatcggagcggccaagggaatcggtcaaaattctcaccaagaaggccgctgcc
gctgtggaagcggccgccgaggccgccaaaacggttgcggctcagacaaggtcggctgct
tcttcaacatccaacccacaacctggaggacaagacgcgccacctaagaatcggaaagca
ggcgtagcagctgctgcactcattcttcagcgcgatctcggcctgagcccgaaaaatgcg
catcgcaaagcccgccaagaagcggccaaagaagcagcaagagaaggggccaaagaagct
gcgaaggcggaatcagaggcgaaagccactaccaaggagaatccaaagccagccgcaccg
gccacctctgaaaccgcgcctcccgctgctcccactgaacccccggcatcgtctactccc
gccaagacccaacagcccgcgtctgggaagtcgcggaataggaaacgcggggctggcgaa
gacaattcaaagactaaaggagaagcgaatggcggaaaacctaccgacacgccagccacg
gcatcagcaaagccgcccgtcacggtattaaagaagaaagactcccagcggagtcagtcc
ccgcaagcccagacgacgccggcctcgacggggcagccgtccaaggccggccagtcggcg
caagcaacaagccaaacggctccctcgtcgaccaagtccgcatcccagaaacagagcggc
ggttccaagaaggcgaatgcccctgccacacccagcccgggcgcgacccgcgcgttcgtc
aagcatgccaaccattctcagggcgtcaccgaggccgtgctgagggatgtcatgcagacg
tttggtaccgtgaccaacatagagatcgaccgcaagaaggggtttgcgtatgtcgacttt
ggcgaccacagcggcctcgccaaggccatggccgccagcccggtgacggtggcgcaagcc
acggtgcaggtcctcgaacgcaaggagatggccaagaagggctcaggctcaggctctggc
tcgggctcgggttcgggctcgggttcggctcaggggaagaatgccgccgccgcggcgacc
gcgtctccagcagcaacgccggctccgggcgcggccaagaccccgggcccggcgtccgcc
gagcagaactcgggcgcccgggcgccggagaaggctggcgggtctgcgccggagaaggct
ggcgagcagcagccgagcaagcgcagtgggaggagacgcggcgggaggggaagaggggac
agggaagccaaggaggccaaggattcgtccaaggacggcggcggcggcgtcaagaagggc
ggcgacggcggaggaggaggaggaggaggaggaggagctggctctgcggcgtctgcagca
gctacgtga
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