Medicago truncatula (barrel medic): 112416461
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Entry
112416461 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112416461
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_3
RT_RNaseH_2
RVT_1
Retrotrans_gag
RT_RNaseH
RNase_H
Integrase_H2C2
Asp_protease_2
gag-asp_proteas
Ty3_capsid
rve
rve_3
eIF3h_C
DUF5712
Motif
Other DBs
NCBI-GeneID:
112416461
NCBI-ProteinID:
XP_039683504
LinkDB
All DBs
Position
7:2783973..2803149
Genome browser
AA seq
2079 aa
AA seq
DB search
MLAAEQENAQLREELANLKGEMERMALMMETMMAEREQATISNSTPVVVVTAAPEGPPQP
SPTTTTAIDLTQPLMTDFSSGNMATTGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATN
GVFGPGATEMPFTQGQQTSAHFQMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIV
CASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGVSSNGNKKFGNGYPKRNAQEVGMV
AHGGPQPVYPNHPFVANITPQLTAPQNPNYQPPRPQGPSLYYPPLYQQPYNPQQLSQPPY
YPQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQ
TILPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVA
QNNPLPTHGPAVNMIQDDQEETRILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICLMD
PRGCIQVQNDMQGLLNRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVI
CVPRPTPTTAQKAVPYKYEGTILEPGSETTSPVAVDNIAENSRILRSGRIFPTVGPKSVS
VPVDEPVKERNAGKGKAGEQAKEFDFEDADEVLKLIKKSEYRVVDQLLQTPAKISIMALL
SSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTACNSLTFSDEDLLAEGNKHNQALL
ISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDGTRRTVYGEV
DLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSG
ESAFLISNLSAFSVIGGSGSDGPSFQGFSAEESVGKIETCMASLKDARRVIQEGKTEGWG
QLVELPENKRKEGIGFLDSKPGMFDPTRGSFHSAGFIHDSPETNAILDDAPGGVTPVFVT
PGGACCNWIAVDIPSVTPCSKLNISESVEHSDPMLSPNFEVPVYEAVAEEDEEIPNEIKW
MLEQERKTIQPHQEEIEIINLGTEEDKKEIKIGASLDVSVKKRVIELIREYVDIFAWSYK
DMPGLDPDVVEHRLPLKPECPPIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKVRM
CVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFIT
PWGAFCYVVMPFGLINAGATYQRGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGR
LNYISRFISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPL
IMYLTVLEDSMGCVLGQQDETGKKEHAIYYLSKKFTDCESRYSMDPIKYIFEKPALTGRI
ARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDEEVMYLKTKDCDEP
VFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIAEYEACI
MGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHV
PRDENQMADALATLSSMINVNGHNTVPIINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFL
QTQKYPPGASNKDKKTLRKLSSRFFLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGS
FGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWP
FSMWGIDMIGRIEPKASNGHRFIFVAIDYFTKIITDNGTNLNNNMMKELCDDFKIQHHNS
SPYRPQMNGAVEAANKNIKKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVY
GMEAVLPVEVEIPSLRVLMEADLSEAEWCQSRYSGECCS
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacgctcagctcagagaggaactggctaacctcaagggg
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcaaca
atctccaattcaactcctgttgtggtcgtcacagctgcacctgagggtcccccgcaacca
tctccgactactactacagctatcgacctcacccagcctctgatgactgatttttcttct
ggtaatatggcaactacgggcaactcaggcttccgtcctcttggcccccagggtcccttt
gctactcctcagtattccatgccttcaggctacccttggggcatgccgattgcaactaac
ggggtttttggtccaggcgctactgaaatgcctttcacacagggtcaacagacttcggca
catttccagatgagtcaaccgattcctcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagaacagatttatcactccgacagtataatgggggatgat
aaagcaatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
ggaaaggaaacagtcgtccaaagcatatatgacctttgcttggtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaagtatcaaggggacacatgtccacaaaat
catctaactatgtatattaggaggatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcacatacctggttcatggggttgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ctggcgccaagtcgcaaagagttgcagtccttaacccagaaagataaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagg
gaactttcagaattgttctatgaaaccctgagcccttgttattcagaaaagatgattgtc
tgtgcatcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggct
cgtaagggagcagctgtttcgggaagttcttcaggtggttcttcaggggtttcgtccaat
ggtaataagaaatttgggaatggttacccaaagaggaatgctcaagaggttggcatggtg
gctcatggaggacctcagcccgtgtaccctaatcacccctttgttgccaacatcacccca
caattgaccgcaccccagaacccaaactatcaaccaccaagacctcaagggccttcatta
tactatcccccactatatcaacaaccatataacccacaacaactctctcaaccaccctac
tatcctcaacaaccctactatcctcaacaaccataccaacaaaggccatataacccccca
caacaacaaccccgtcctcaagctccctacaaccagcaaaatcaaaaacaacaatttgac
cccttgccaatgacctatggagcattgctcccttctttacttgcacagaatctggtccaa
acaatactacctcctcgcattccggaccctctcccacgctggtaccgtccggaccttcat
tgtatttaccatcaaggggcaccaggccacgatgtggagcgttgttttgctcttaagaaa
gaggttcagaaactgataaatagtaaagagttaaccttcaccgatcctgatgctgtagcc
cagaacaatcctctgcctactcatgggcctgctgttaatatgattcaagacgatcaggaa
gagactcgcattctctctgtaggtgatatcaagactcctctggtaccgatacatgtgaaa
atgtgtaaagcaactctcttcaaccacaatcatgaagcttgtgacatatgtttgatggat
cctcgtggatgtatacaagtccagaatgatatgcagggtctcctaaatagaagggaactt
gtggttacaagggaacccgagagcaaggacgtctgtgttgtcactccggtattcagagct
aggaggccgctggtgataaaccctaacagtacaaagcccgttggtactcccttggtaatc
tgtgtgcctaggcccacgcctactactgctcagaaagctgtaccctataagtatgaaggc
acgattcttgagcccggaagtgagacaacttcacctgttgctgtggataatatcgcagag
aatagccggattttgaggagtggccgcatctttcctacggtgggtccgaagagtgttagc
gttccggtcgatgagccagtaaaagagcgaaacgctggtaaaggtaaagctggggagcag
gccaaagagtttgactttgaggatgccgatgaagtcttgaagctgatcaagaagagtgaa
tacagggtggtggaccagctgttacaaactcctgcgaagatttccatcatggccctgtta
tcaagttctggtgctcatcgggatgccctgaggaaagtactagaccaggcatttgtggat
tatgatgtaactctgggtcaattcgaaagcattgtggggaatgtgaccgcgtgtaacagt
ctgactttcagtgatgaagatctcctggcggaggggaataagcataatcaagcattactc
atctctgtactttgcagaacagactcgttatccaacgtcttgatagataccggctctgca
cttaatgtgatgcccaagtcaactctcgaccaattggcgtactccgaggctcctttgaga
cttagcaaggtgacggtgagggccttcgatggaactaggagaacggtgtatggtgaggta
gatttgccaatttcggtcggcccgcatgaatttcaggttactttccaagtcatggaaatc
caggcttctttcagctgtttgctcggcagaccgtggattcatgacgctggggctgtgaca
tctactctccatcagaaattgaagtttgtaagtcgtggaaagttgatcactgtgagtggc
gaatcggcctttttaatcagcaatttgtctgctttctctgttatcggtggtagtggttca
gacgggccatcattccaaggattctctgccgaagaaagtgtcggtaagattgagacttgt
atggcttcgttgaaggatgcccggagagtaattcaggaaggcaaaaccgaaggctggggt
cagctagtggagttgccagaaaacaagcgtaaggagggaattggtttccttgacagtaag
cctgggatgttcgaccctaccagaggttctttccacagtgctggtttcattcatgattca
ccagagaccaatgcaattttagatgatgcacctggaggagtgacaccggtctttgtgacg
cctggaggagcttgctgcaactggattgctgttgacattccttctgtgacaccctgctct
aaactgaacataagtgaatccgttgaacacagtgaccccatgctttctcccaactttgag
gtcccggtttacgaggctgtggcagaggaggatgaggagatcccgaatgagatcaaatgg
atgttggaacaagaaaggaagacaattcaacctcatcaggaggagatagaaatcatcaat
ctgggtactgaggaagacaagaaagaaatcaagattggggcatcgttggatgtatctgtc
aagaaaagagtaattgagcttatcagagaatatgttgatatattcgcatggtcatacaaa
gacatgccgggtctagaccctgatgtcgttgaacacagactaccgttgaagcctgagtgt
cctccgatcaaagaggaagtgcgaaagcaaattgatgcaggtttcctagtcacatcagag
tatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatg
tgtgttgattatcgggacttgaacaaggctagtccgaaggataattttcctttgcctcac
attgatgtattggttgataacactgctaagtgcaaggttttctccttcatggacggtttc
tccggctacaatcagatcaggatggctcctgaggatagagaaaagacgtctttcatcacg
ccctggggtgctttctgctatgtggtgatgccatttggtttgataaatgctggtgccact
taccaaaggggctttatcgtcagtcaaaaaggtattgaagttgatcccgacaaggtcaga
gccatcagagaaatgcctgttccaaagacagagaagcaagtcagaggttttcttggtaga
ctcaattatatctccagatttatctctcacatgaccgccacatgtggaccaattttcaag
ttactccgcaaggatcaaggggtgaagtggaatgatgattgtcagaaggcttttgatcaa
atcaaagaatatctgttagagcctccaattcttgttcctccagttgacggaagacctttg
atcatgtatttaacagtactagaagattccatgggctgtgttttgggtcaacaagacgaa
accggaaagaaagagcacgctatctactatttgagtaagaagttcactgattgtgagtcc
cgatattctatggatcctatcaagtacatatttgagaagccagctttaactggaaggatt
gctcgctggcagatgttattgtccgagtatgatatcgagtatcgcactcagaaagcagtc
aaaggtagcatcttggcagaacatttggctcatcaaccaatcgaagactatcaaccaatc
aaattcgacttcccagatgaagaggttatgtatctaaaaacaaaagattgtgacgaacca
gtgttcggtgaaggtcctgatcctgaatccgaatggggtttgatatttgatggagctgtt
aatgtctatggaagtggaattggtgcggtgctcattacccctaagggtactcacatccct
tttactgcgaggttacgttttgattgcacaaacaacatcgcagagtacgaagcttgcatc
atgggtatcgaggaagccatcgatttgaggatcaagaaaattgtcatttatggagattcc
gctcttgtgattaaccagatcaaaggagaatgggaaactcgtcatcctggattgattccc
tacagagattatgcaaggcgtttgctaactttcttcaataaagtagagttacatcatgtg
ccccgcgatgagaatcaaatggcagatgctttagctactctatcctcaatgatcaatgtg
aatggtcacaatactgtgccaataatcaatgtccaatttctcgaccgacctgcttatgtg
tttgtagctgaagcaattgatgatgacaagccatggtatcatgatatccaagttttcctt
caaactcaaaagtacccacctggggcatccaacaaggacaagaaaacattgagaaaattg
tcaagccgtttcttccttaacgaagacgttttgtataaaaggaactttgatggggtccta
cttagatgtgtggataagcatgaagcagaaaaattgatgtgcgagattcatgaaggctct
ttcggaactcactcatgtgggcacgccatggcgaagaagatattgagagctgggtactac
tggataacaatgcacgctgattgctacaatcatgccaagagatgccacaaatgtcaaatc
tatgctgacaagattcatataccaccatctatgctcaatgtcatctcttccccgtggccc
ttctctatgtggggcattgacatgattggtcggattgaaccaaaggcttccaatgggcat
cgcttcatattcgtggctatcgattatttcaccaaaatcatcacagacaatggcacaaat
ctgaataacaacatgatgaaagagttgtgcgatgacttcaagattcaacatcacaattct
tctccttacagaccacagatgaatggggcagttgaagctgcaaacaagaacatcaagaag
atcatacagaagatggtagttacttataaggactggcatgaaatgttaccctacgctttg
tatggataccgtacctcagtgcgaacctcgacaggggcaacccctttctctttggtatat
ggtatggaggctgtactaccggtagaggttgagattccttctttaagagtcttgatggaa
gctgatttgtctgaagctgaatggtgccagagcaggtattccggtgaatgttgcagctaa
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integrated database retrieval system
