Medicago truncatula (barrel medic): 112417368
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Entry
112417368 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112417368
Organism
mtr
Medicago truncatula (barrel medic)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
RVT_1
RT_RNaseH_2
gag-asp_proteas
Asp_protease_2
eIF3h_C
Motif
Other DBs
NCBI-GeneID:
112417368
NCBI-ProteinID:
XP_039685002
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All DBs
Position
8:24643955..24648467
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AA seq
1264 aa
AA seq
DB search
MGDDKAVNWEERFGALEKEMSNMRGKEVVVQSIYDLCLEQRTFAHSLLPGQFDRSCTYLV
LGLKGITTFEKLVDAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKASQIRP
PLDERELSEMFYETLSPCYSEKMIVCASQKFTDLVETGIRIEDWARKGAGSSGGSAGSSS
NGNKKFGNGYSKRNAQEVGMVAHGGSQLVYPNHPYVANITPQMTAPQNPNYQPPRPQGPS
PYYPPLYQLPYNPQQFPQQPYYPQQPYQQRPQYPPQQQPRPQAPYNQQNQKQQFDPIPMT
YGALLPSLLAQNLVHTLPPPRIPDPLPRWYRPELHCVYHQGAAGHDVERCYALKKEVQKL
LNSKELTFTDPDHVAQNNPLPPHGPVNMIQYCQEDACILYACDIKTPLVPIHVKMCEVTL
FSHDHEACDVCSVDPRGCMQVQNDVQGLLDKKELVVTNEIKSKSGCVVTPVFRARRPLVI
NPNSAKPAGTPLVICVPRHVPPSSQKAVSYKYEGTILEPGSETTSSSVMDNIAESSQILR
SGRVLPAVVQKSTSIPVEETVKEQNTGKGRVGEHPKEVDYEGADEILKLIKRSEYRVVDQ
LLQTPAKISIMSLLSSSGAHRDALKKVLDQAFVDYDVTLGQFESIVGNVTACNSLSFSDE
DLPAEGKKHNQALLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLTYSEALLRPSKVTV
RAFDGTRRSVYGEIDLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQK
LKFVSHGKLITVSGESTFLISNLSAFSVIGGSSSDGSSFQGFSAEGSEGKTEGWGQLVEL
PENKRKEGISFLNRRSGMFDPTEGSFRSAGFIHDSPKINAITDDAPGGVAPVFVTPGGAC
CNWIAVDIPSVIPRSKLDISEPVEHSNPMLPPNFEVPVYEAIVEEDEEIPDEIRWMLEQE
RKTIQPHQEEIEIINLGTEEDKKEIKIGALLEVSVKKRIIELLREYNEIFAWSYKDMPGL
DPDVVEHRLPLKSDCPPVKQKLRRSHPDMALKIKEEVRKHIDAGFLVTSEYPQWLANIVP
VPKKDGKVRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDCFSGYNQIRMAP
EDREKTSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMT
ATCGPIFKLLRKDQGVKWNVDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLGDSMG
CVLG
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgacaaagcagttaactgggaagagaggttcggggctttggaaaaagagatg
agtaacatgcgtggtaaagaagtagtcgtccagagtatatacgatctttgcttggaacaa
cgtacctttgctcattcattgcttccaggacagtttgaccggtcctgcacatacttggtt
ttgggattgaagggcattactacgtttgaaaaattggttgacgctttcatgcaacaatac
aaatacaacacgtatctggcgcctagtcgcaaagagttgcagtccttgacccagaaggac
aaagaatcattcaaagagtatgcacaacgcttcatccagaaggcctcccagattcgtccg
cccttggatgaaagggaattatccgagatgttctatgagactctgagcccttgttattca
gagaaaatgattgtttgtgcatcacagaaattcaccgacctggtagagacggggatacgt
attgaggattgggctcgtaagggagcaggttcttcaggtggttctgcaggaagttcgtct
aatggtaacaagaagtttggtaatggttactcaaagaggaatgctcaagaagtcggcatg
gtggcccatggaggatctcagcttgtgtaccctaatcatccttatgttgctaacattacc
ccacaaatgaccgctccccagaatccaaattatcaaccaccaagacctcaaggaccttca
ccatactatccaccactatatcaactaccatacaacccacagcaattccctcaacaacca
tattacccccaacaaccataccaacaaaggccacaatacccaccacaacaacaaccccgt
cctcaagctccctacaatcagcagaatcaaaaacaacaatttgatcccataccaatgact
tatggagcattactgccttccttgctcgcgcaaaacctggttcacacactaccaccccct
cgcattccagatcctctcccacgctggtaccgtcctgaacttcattgtgtttatcatcaa
ggggcagcaggtcacgatgtggaacgttgttatgccctcaagaaagaggtccaaaaactg
ctcaatagcaaagagttaactttcaccgaccctgatcatgttgcccagaacaatcctctg
cctccccatgggcctgttaatatgattcaatactgtcaggaagatgcctgcattctctac
gcatgtgacatcaagacccctttggtaccgatacatgtgaaaatgtgtgaagtaactctc
ttcagtcacgatcacgaggcttgtgatgtgtgttccgtggatcctcgtggttgcatgcaa
gtccaaaatgatgtgcaaggtctcctagataaaaaggaacttgtggttacaaacgaaatc
aagagcaaaagtggttgtgttgtcaccccggtattcagagctaggaggccgcttgtgata
aaccctaacagtgcaaagcccgctggcactcctctggtaatctgtgtccctaggcatgta
cctccttcctctcagaaagccgtatcttacaaatatgaaggcacaattctagaacccgga
agtgaaacgacctcatcctctgttatggacaatattgccgagagtagtcagattttgaga
agcggccgcgttcttcctgctgtggttcagaaaagcactagtattccggtcgaagaaaca
gtaaaggagcagaacacaggtaaaggtagagttggagagcatcccaaagaggttgactat
gagggtgctgatgaaatcttaaagctgatcaagaggagtgaatacagggttgtggaccaa
ttgttacaaacccctgcaaagatttccattatgtctctgttatcaagctctggtgctcat
cgagatgccctgaagaaagtactagaccaggcttttgtggattatgatgtgactttgggc
cagtttgaaagtattgtggggaatgtgaccgcatgtaacagtctgagtttcagtgatgaa
gacctcccagcggaggggaagaagcacaatcaggcattactcatctctgtactttgcaga
acagactccttatccaatgttctgatagacaccggctctgctcttaatgtgatgcccaaa
tcaacccttgaccaattgacatattccgaggctctcttgaggcccagtaaggtgacggtg
agggcatttgatgggaccagaagatcagtatatggtgagatagatttgcccatctcagtc
ggcccacatgagtttcaggttacttttcaagtcatggagatccaggcttctttcagctgt
ttgcttggcagaccatggattcatgacgctggggcagtgacatccactctccaccagaag
ctgaagtttgtaagccatggaaagctcattactgtgagtggtgagtcaacctttttgatc
agcaatttgtctgctttctctgttattggtggtagtagttcagatgggtcatcattccaa
gggttctctgctgaaggaagtgaaggcaaaactgaaggttggggtcagctagtggagtta
ccagagaacaagcgcaaggaagggattagttttcttaacagaaggtctgggatgtttgac
cctaccgaaggctctttccgcagtgctggattcatccacgattcgccaaagatcaatgca
attaccgatgatgcgcctggaggagtggcacctgtctttgtaacacctggaggagcatgc
tgcaactggattgctgtggacattccttctgtgataccccgttctaaactggacataagc
gagcccgttgaacacagtaaccccatgcttcctcccaactttgaggtcccggtttacgag
gctatagtagaggaggatgaggagattcctgatgagatcagatggatgttggaacaagaa
agaaagacaattcaacctcatcaagaagagatagaaatcatcaatctgggtactgaggaa
gacaaaaaagagatcaagattggggcattgttggaggtatctgtcaagaagaggataatt
gagcttctcagagagtataatgaaatatttgcatggtcatacaaggacatgccgggtcta
gatcctgatgttgtggaacacagactgcctttgaagtctgactgtcctccagtaaagcag
aaattgagaagatctcatcccgatatggccctcaaaatcaaagaggaagtgcgaaagcat
attgatgcaggtttcctagtcacatcagagtatcctcaatggttggccaacatagtgccc
gttccaaagaaagatggcaaagtcagaatgtgtgttgattatcgggacttgaacaaggct
agtccaaaggataatttccctttacctcacattgatgtattggttgataacaccgctaag
tgcaaggttttctccttcatggactgtttctccggctacaatcagatcaggatggctcct
gaggatagagaaaagacatctggtaaactcctaggctttatcgttagtcaaaagggtatt
gaagttgatcccgacaaggtcagagccatcagagaaatgcctgttccaaagacagagaag
caagtcagaggttttcttggtagacttaattatatctccagatttatctctcacatgact
gccacatgtggaccaattttcaagttactccgcaaggatcaaggggtgaagtggaatgtt
gattgtcagaaggcttttgatcaaatcaaagaatatctgttagaacctccaattcttgtt
cctccagttgatggaagacctttgatcatgtatttaacagtattgggagattccatgggc
tgtgtgttaggttaa
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