Medicago truncatula (barrel medic): 112420084
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Entry
112420084 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112420084
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_3
RVT_1
Retrotrans_gag
RNase_H
Integrase_H2C2
Asp_protease_2
gag-asp_proteas
Ty3_capsid
rve
rve_3
eIF3h_C
DUF5712
Motif
Other DBs
NCBI-GeneID:
112420084
NCBI-ProteinID:
XP_039687993
LinkDB
All DBs
Position
3:complement(33300597..33313169)
Genome browser
AA seq
2219 aa
AA seq
DB search
MLAAEQENAQLREELVNLKGEMERMALMMETMMAEREQAAISNSTPVVVVTAAPEGPPQP
SPTTTTTIGLTQPLMTDFSSGNMATMGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATN
GVFGPGATEMPFAQGQQTSAHFQMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYISKMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIV
CASQKFTDLVETGMRIEEWARKGAAVSGSFSGGSSGVSSSGNKKFGNGYPKRNAQEVGMV
AHGGPQPVYPNHPFVANITPQMTAPQNPNYQPPRPQGPSLYYPPLYQQPYNPQQLSQPPY
HPQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQ
TIPPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVA
QNNPLPTHGPAVNMIQDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICSMD
PRGCIQVQNDVQGLLNRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVI
CVPRPTPTTAQKAVPYKYEGTILEPGSETTSPVAVDNIAENSRILRSGRIFPTVGPKSVS
VPVDEPVKERNAGKGKAGEQAKEFDFEDADEVLKLIKKSEYRVVDQLLQTPAKISIMALL
SSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTVCNSLTFSDEDLPAEGNKHNQALF
ISVLCRTDSLSNVLIDTGSALNVMPKSTFDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEV
DLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSG
ESAFLISNLSAFSVIGGSGSDGPSFQGFSAEESVGKIETCMASLKDARRVIQEGKTEGWG
QLVELPENKRKEGIGFLNSKPGMFDPTRGSFHSAGFIHDSPETNAILDDAPRGVTPVFVT
LGGVCCNWIAVDIPSVTPGSKLNISESVEHSDPMLSPNFEVPVYEAVAEEDEEIPNEIKW
MLEQERKTIQSHQEEIEIINLGTEEDKKEIKIGASLDVSVKKRVIELIREYVDIFAWSYK
DMPGLDPDVVEHRLPLKPECPPIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKVRM
CVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFIT
PWGAFCYVVMPFGLINAGATYRGSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVR
GFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPV
DGRPLIMYLTVLEDSMGCVLGQQDETGKKEHAIYYLSKKFTDCESRYSVLEKTCCALTWA
AKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAIKGSIL
AEHLAHQPIEDYQPIKFDFPDEEVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGS
GIGAVLITPKGTHIPFTARIRFDCTNNIAEYEACIMGIEEAIDLRIKKIVIYGDSALVIN
QIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVNGHNT
VPVINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSRFF
LNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMH
ADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILV
AIDYFTKIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNIKKIIQKM
VVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSE
AEWCQSSCSLSKDFLELIGRCCPLLKSLNLERLSSLRFYGKRDEALAFAKTMTGLRHLKL
NGIYVNYVGFLAILDGCHHLESFDLQSPTSLVGKCNEALAIAKTISGLRHLKLNGINFS
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacgctcagctcagagaggaactggttaacctcaagggg
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcagca
atctccaattcaactcctgttgtggtcgtcacagctgcacctgagggtcctccgcaacca
tctccgactactactacaactatcggcctcacccagcctctgatgactgatttttcttct
ggtaatatggcaactatgggcaactcaggcttccgtcctcttggcccccagggtcccttt
gctactcctcaatattccatgccttcaggctacccttggggcatgccgattgcaactaac
ggggtttttggtccaggcgctactgaaatgcctttcgcacagggtcaacagacttcggca
catttccagatgagtcaaccgattcctcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagagcagatttatcactctgacagtataatgggggatgat
aaagcaatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
ggaaaggaaacagtcgtccaaagcatatatgacctttgcttggtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaagtatcaaggggacacgtgtccacaaaat
catctaactatgtatattagcaagatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcacatacttggttcatggggttgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ctggcgccaagtcgcaaggagttgcagtccttaacccagaaagataaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagg
gaactttcagaattgttctatgaaaccctgagcccttgttattcagaaaagatgattgtc
tgtgcatcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggct
cgtaagggagcagctgtttcgggaagtttttcaggtggttcttcaggagtttcgtccagt
ggtaataagaaatttgggaatggttacccaaagaggaatgctcaagaggttggcatggtg
gctcatggaggacctcagcccgtgtaccctaatcacccctttgttgccaatatcacccca
caaatgaccgcaccccagaacccaaactatcaaccaccaagacctcaagggccttcatta
tactatcccccactatatcaacaaccatataacccacaacaactctctcaaccaccctac
catcctcaacaaccctactatcctcaacaaccataccaacaaaggccatataacccccca
caacaacaaccccgtcctcaagctccctacaaccagcaaaatcaaaaacaacaatttgac
cccttgccaatgacctatggagcattgctcccttctttacttgcacagaatctggtccaa
acaataccacctcctcgcattccggaccctctcccacgctggtaccgtccggaccttcat
tgtatttaccatcaaggggcaccaggccatgatgtggagcgttgttttgctcttaagaaa
gaggttcagaaactgataaatagtaaagagttaaccttcaccgaccctgatgctgtagct
cagaacaatcctctgcctactcatgggcctgctgttaatatgattcaagacgatcaggaa
gaggctcgcattctctctgtaggtgatatcaagactcctctggtaccgatacatgtgaaa
atgtgtaaagcaactctcttcaaccacaatcatgaagcttgtgacatatgttcgatggat
cctcgtggatgtatacaagtccagaatgatgtgcagggtctcctaaatagaagagaactt
gtggttacaagggaacccgagagcaaggacgtatgcgttgtcactccggtattcagagcc
aggaggccgctggtgataaaccctaacagtacaaagcccgttggtactcccttggtaatc
tgtgtgcctaggcccacgcctactactgctcagaaagctgtaccctacaagtatgaaggc
acgattctagagcccggaagtgagacaacttcacctgttgctgtggataatatcgcagag
aatagccggattttgaggagtggccgcatctttcctacggtgggtccgaagagtgttagt
gttccggtcgatgagccagtaaaagagcgaaacgccggtaaaggtaaagctggggagcag
gccaaagagtttgactttgaggatgccgatgaagtcttgaagctgatcaagaagagtgaa
tacagggtggtggaccagctgttacaaactcctgcgaagatttccatcatggccctgtta
tcaagttctggtgctcatcgggatgccctgaggaaagtactagaccaggcatttgtggat
tatgatgtaactctgggtcaattcgaaagcattgtggggaatgtgaccgtatgtaacagt
ctgactttcagtgatgaagatctcccggcggaggggaataagcataatcaagcattattc
atctctgtactttgcagaacggactcgttatccaacgtcctgatagataccggctctgca
cttaatgtgatgcccaagtcaactttcgaccaattggcgtactccgaggctcctttgaga
cttagcaaggtgacagtgagggccttcgatggaactaggagatcggtgtatggtgaggta
gatttgccaatttcggtcggcccacatgaatttcaggttactttccaagtcatggaaatc
caggcttctttcagctgtttgctcggcagaccttggattcatgacgctggggctgtgaca
tctactctccatcagaaattgaagtttgtaagtcgtggaaagttgatcactgtgagtggc
gaatcggcctttttaatcagcaatttgtctgctttctctgttatcggtggtagtggttca
gacgggccatcattccaaggattctctgccgaagaaagtgtcggtaagattgagacttgt
atggcttcgttgaaggatgcccggagagtaattcaggaaggcaaaaccgaaggctggggt
cagctagtggagttgccagaaaacaagcgtaaggagggaattggtttccttaacagtaag
cctgggatgttcgaccctaccagaggttctttccacagtgctggtttcattcatgattcg
ccagagactaatgcgattttagatgatgcacctagaggagtgacaccggtctttgtgacg
cttggaggagtttgctgcaactggattgctgttgacattccttctgtgacacccggctct
aaactgaacataagtgaatccgttgaacacagtgaccccatgctttctcccaactttgag
gtcccggtttacgaggctgtggcagaagaggatgaggagatcccgaatgagatcaaatgg
atgttggaacaagaaaggaagacaattcaatctcatcaggaggagatagaaatcatcaat
ctgggtactgaggaagacaagaaagaaatcaagattggggcatcgttggatgtatctgtc
aagaaaagagtaattgagcttatcagagaatatgttgatatattcgcatggtcatacaaa
gacatgccgggtctagaccctgatgtcgttgaacacagactacctttgaagcctgagtgt
cctccgatcaaagaggaagtgcgaaagcaaattgatgcaggtttcctagtcacatcagag
tatcctcaatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatg
tgtgttgattatcgggacttgaacaaggctagtccgaaggataattttcctttgcctcac
attgatgtattggttgataacactgctaagtgcaaggttttctccttcatggacggtttc
tccggctacaatcagatcaggatggctcctgaggatagagaaaagacgtctttcatcacg
ccctggggtgctttctgttatgtggtgatgccatttggtttgataaatgctggtgccact
tacagaggatctggtaaactcctaggttttatcgtcagtcaaaagggtattgaagttgat
cccgacaaggtcagagccatcagagaaatgcctgttccaaagacagagaagcaagtaaga
ggttttcttggtagactcaattatatctccagatttatctctcacatgaccgccacatgt
ggaccaattttcaagttactccgcaaggatcaaggggtgaagtggaatgatgattgtcag
aaggcttttgatcaaatcaaagaatatctgttagaacctccaattcttgttcctccagtt
gacggaagacctttgatcatgtatttaacagtactagaagattccatgggctgtgttttg
ggtcaacaagacgaaaccggaaagaaagagcacgctatctactatttgagtaagaagttc
actgattgtgagtcccgatattctgtacttgagaaaacttgttgtgctttaacttgggct
gccaagcgtctccgtcattatatgattaatcatacaacttggttgatatccaagatggat
cctatcaagtacatatttgagaagccagctttaactggaaggattgctcgctggcagatg
ttattgtccgagtatgatatcgagtatcgcactcagaaagcaatcaaaggtagcatcttg
gcagaacatttggctcatcaaccaatcgaagactatcaaccaatcaaattcgacttccca
gatgaagaggttatgtatctaaaagcaaaagattgtgacgaaccagtgttcggtgaaggt
cctgatcctgaatccgaatggggtttgatatttgatggagccgttaatgtctatggtagt
ggaattggtgcagttctcattacccctaagggtactcacatcccttttactgcaaggatt
cgatttgattgtacaaacaacatcgcagaatatgaagcttgcatcatgggtatcgaagaa
gccatcgacttgaggatcaagaaaattgtcatctatggagattccgctcttgtgattaac
cagatcaaaggagaatgggaaactcgccatcctggtttgattccctacagagattatgcg
agacgattgctgactttcttcaacaaagtagagttacatcatgtgccccgggatgagaat
caaatggcagatgctttagctactctatcctcaatgatcaatgtgaatggtcacaatact
gtgccagtaatcaatgtccaatttctcgaccgacctgcttatgtgtttgtagctgaagca
attgatgatgacaagccatggtatcatgatatccaagttttccttcaaactcaaaagtac
ccacctggggcatccaacaaggacaagaaaacattgagaaaattgtcaagccgtttcttc
cttaacgaagacgttttgtataaaaggaactttgatggggtcctacttagatgtgtggat
aagcatgaagcagaaaaattgatgtgcgagattcatgaaggctctttcggaactcactca
tgtgggcacgccatggcgaagaagatattgagagctgggtactactggataacaatgcac
gctgattgctacaatcatgccaagagatgccacaaatgtcaaatctatgctgacaagatt
catataccaccatctatgctcaatgtcatctcttccccgtggcccttctctatgtggggc
attgacatgattggtcggattgaaccaaaggcttccaatgggcatcgcttcatattagtg
gctatcgattatttcaccaaaatcatcacagacaatggcacaaatctgaataacaacatg
atgaaagagttgtgcgatgacttcaagattcaacatcacaattcttctccttacagacca
cagatgaatggggcagttgaagctgcaaacaagaacatcaagaagatcatacagaagatg
gtagttacttataaggactggcatgaaatgttaccctacgctttgtatggataccgtacc
tcagtgcgaacctcgacaggggcaacccctttctctttggtatatggtatggaggctgta
ctacctgtagaggttgagattccttctttaagagtcttgatggaagctgaattgtctgaa
gctgaatggtgccagagcagctgcagcctatctaaggatttccttgaacttattggtcga
tgttgccctcttttgaagtcactaaatcttgagaggttgtcttccttgagattttatggc
aagcgagatgaagcacttgcttttgcgaaaacaatgactgggttacgccatcttaaactg
aatggaatttatgttaactatgttggatttcttgctattcttgacggctgccatcatctt
gaatcttttgatctgcaaagtcccacatctcttgttggcaagtgtaatgaagcattagca
attgcaaaaacaatatctggtttacgccatcttaaattgaatggaattaatttctcttaa
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