Medicago truncatula (barrel medic): 112420176
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Entry
112420176 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112420176
Organism
mtr
Medicago truncatula (barrel medic)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_3
RVT_1
Retrotrans_gag
RNase_H
Integrase_H2C2
Asp_protease_2
gag-asp_proteas
Ty3_capsid
rve
rve_3
DUF5712
Motif
Other DBs
NCBI-GeneID:
112420176
NCBI-ProteinID:
XP_039687937
LinkDB
All DBs
Position
3:26130493..26143085
Genome browser
AA seq
2073 aa
AA seq
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MLAAEQENAQLREELVNLKGEMERMALMMETMMAEREQAAISNSTPVVVVTAAPEGPPQP
SPTTTTTIGLTQPLITDFSSGYPWGMPIATNGVFGPGATEMPFAQGQQTSAHFQMSQPIP
QATMTQAGPTVHVGPQHEEQIYHSDSIMGDDKAIDWEERFGALEKKMSNMRGKEAVVQSI
YDLCLVPDVNIPPKFKMPVFEKYQGDTCPQNHLTMYISKMIAYKNNVPLLIHCFQDSLTG
PAHTWFMGLKGVTTFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQK
AAQIRPPLDERELSDLFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGS
SSGGSSGVSSSGNKKFGNGYPKRNAQEVGMVAHGGPQPVYSNHPFVANITPQMTAPQNPN
YQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQ
KQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERC
FALKKEVQKLINSKELTFTDPDAVAQNNPLPTHGPAVNMIQDDQEEARILSVGDIKTPLV
PIHVKMCKATLFNHNHEACDICLMDPRGCIQVQNDMQGLLNRRELVVTREPESKDVCVVT
PVFRARRPLVINPNSTKPVGTPLVICVPRPTPTTAQKAVPYKYEGTILEPGSETTSPVVV
DNIAENSRILRSGRIFPTVGPKSVSVPVDEPVKERNAGKGKAGEQAKEFDFEDADEVLKL
IKKSEYRVVDQLLQTPAKISIMALLSSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNV
TACNSLTFSDEDLPAEGNKHNQALLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYS
EAPLRLSKVTVRAFDGTRRSVYGEVDLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHD
AGAVTSTLHQKLKFVSRGKLITVSGESAFLISNLSAFSVIGGSSSDGPSFQGFSAEESVG
KIETCMASLKDARRVIQEGKTGGWGQLVELPENKRKEGIGFLNSKPGMFDPTRGSFHSAG
FIHDSPETNAILDDAPGGVTPVFVTPGGACCNWIAVDIPSVTPRSKLNISESVEHSDPML
SPNFEVPVYEAVAEEDEEIPNEIKWMLEQERKTIQPHQEEIEIINLGTEEDKKEIKIGAL
LDVSVKKRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPECPPIDAGFLVTSEYPQ
WLANIVPVPKKDGKVRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGY
NQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGFIVSQKGIEVDPDKVRAIR
EMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVEWNDDCQKAFDQIKE
YLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETGKKEHAIYYLSKKFTDCESRYS
VLEKTCCALTWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIE
YRTQKAVKGSILAEHLAHQPIEDYQSIKFDFPDEEVMYLKAKDCDEPVFGEGPDPESEWG
LIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKK
IVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALAT
LSSMINVNGHNTVPVINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNKD
KKTLRRLSSRFFLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKK
ILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIE
PKASNGHRFILVAIDYFTKIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEA
ANKNIKKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP
SLRVLMEAELSEAEWCQSRQWRSQEIYGAWAKN
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacgctcagctcagagaggaactggttaacctcaagggg
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcagca
atctccaattcaactcctgttgtggttgtcacagctgcacctgagggtcctccgcaacca
tctccgactactactacaactatcggcctcacccagcctctgataactgatttttcttct
ggctacccttggggcatgccgattgcaactaacggggtttttggtccaggcgctactgaa
atgcctttcgcacagggtcaacagacttcggcacatttccagatgagtcaaccgattcct
caagctaccatgactcaagcaggtcctactgtgcatgttgggccacaacatgaagaacag
atttatcactccgacagtataatgggggatgacaaagcaatcgattgggaagaaaggttc
ggtgctctagagaagaagatgagtaatatgcggggaaaggaagcagtcgtccaaagcata
tatgacctttgcttggtaccagatgtaaacatacctccaaagttcaagatgcctgtattt
gagaagtatcaaggggacacatgtccacaaaatcatctaactatgtatattagcaagatg
atagcttacaagaataatgttcccttactcattcactgcttccaggatagtttgactggt
ccggcacatacctggttcatgggattgaaaggagtcactacttttgaacagttggctgag
gccttcatgcaacagtacaaatataatacctatctggcgccaagtcgcaaggagttgcag
tccttaacccagaaagataaagaatcgttcaaagaatacgcacaacgcttcattcaaaaa
gctgctcagattcgtcctcccttggatgagagggaactttcagatttgttctatgaaacc
ctgagcccttgttattcagaaaagatgattgtctgtgcatcacagaagttcactgacttg
gtggaaacaggaatgcgtatcgaggagtgggctcgtaagggagcagctgtttcgggaagt
tcttcaggtggttcttcaggagtttcgtccagtggtaataagaaatttgggaatggttac
ccaaagaggaatgctcaagaggttggcatggtggctcatggaggacctcagcccgtgtac
tctaatcacccctttgttgccaacatcaccccacaaatgaccgcaccccagaacccaaac
tatcaatcacccagacctcaaggacctgcaccatactaccccccattataccaaccacta
tacaacctacaacaactctctcaacaaccctactatcctcaacaaccataccaacaaagg
ccatataaccccccacaacaacaaccccgtcctcaagctccctacaaccagcaaaatcaa
aaacaacaatttgaccccttgccaatgacctatggagcattgctcccttctttacttgca
cagaatctggtccaaactataccacctcctcgcattccggaccctctcccacgctggtac
cgtccggaccttcattgtatttaccatcaaggggcaccaggccacgatgtggagcgttgt
tttgctcttaagaaagaggttcagaaattgataaatagtaaagagttaaccttcaccgac
cctgatgctgtagctcagaacaatcctctgcctactcatgggcctgctgttaatatgatt
caagacgatcaggaagaggctcgcattctctctgtaggtgatatcaagactcctctggta
ccgatacatgtgaaaatgtgtaaagcaactctcttcaaccacaatcatgaagcttgtgac
atatgtttgatggatcctcgtggatgtatacaagtccagaatgatatgcagggtctccta
aatagaagggaacttgtggttacaagggaacccgagagcaaggacgtctgtgttgtcact
ccggtattcagagccaggaggccactggtgataaaccctaacagtacaaagcccgttggt
actcccttggtaatctgtgtgcctaggcccacgcctactactgctcagaaagctgtaccc
tataagtatgaaggcacgattcttgagcccggaagtgagacaacttcacctgttgttgtg
gataatatcgcagagaatagccggattttgaggagtggccgcatctttcctacggtgggt
ccgaagagtgttagtgttccggtcgatgagccagtaaaagagcgaaacgccggtaaaggt
aaagctggggagcaggccaaagagtttgactttgaggatgccgatgaagtcttgaagctg
atcaagaagagtgaatacagggtggtggaccagctgttacaaactcctgcgaagatttcc
atcatggccctgttatcaagttctggtgctcatcgggatgccctgaggaaagtactagac
caggcatttgtggattatgatgtaactctgggtcaattcgaaagcattgtggggaatgtg
accgcgtgtaacagtctgactttcagtgatgaagatctcccggcggaggggaataagcat
aatcaagcattactcatctctgtactttgcagaacagattcgttatccaacgtcttgata
gataccggctctgcacttaatgtgatgcccaagtcaactctcgaccaattggcgtactcc
gaggctcctttgagacttagcaaggtgacagtgagggccttcgatggaactaggagatcg
gtgtatggtgaggtagatttgccaatttcggtcggcccacatgaatttcaggttactttc
caagtcatggaaatccaggcttctttcagctgtttgctcggcagaccatggattcatgac
gctggggctgtgacatctactctccatcagaaattgaagtttgtaagtcgtggaaagttg
atcactgtgagtggcgagtcggcctttttaatcagcaatttgtctgctttctctgttatc
ggtggtagtagttcggacgggccatcattccaagggttctctgccgaagaaagtgtcggt
aagatcgagacttgtatggcttcgttgaaggatgcccggagagtaattcaggaaggcaaa
accggaggctggggtcagctagtggagttgccagaaaacaagcgtaaagagggaattggt
ttccttaacagtaagcctgggatgttcgaccctaccagaggttctttccacagtgctggt
ttcattcatgattcgccagagaccaatgcaattttagatgatgcacctggaggagtgaca
ccggtctttgtgacgcctggaggagcttgctgcaactggattgctgttgacattccttct
gtgacaccccgctctaaactgaacataagtgaatccgttgaacacagtgaccccatgctt
tctcccaactttgaggtcccggtttacgaggctgtggcagaggaggatgaagagatcccg
aatgagatcaaatggatgttggaacaagaaaggaagacaattcaacctcatcaggaggag
atagaaatcatcaatctgggtactgaggaagacaagaaagaaatcaagattggggcattg
ttggatgtatctgtcaagaaaagagtaattgagcttatcagagaatatgttgatatattc
gcatggtcatacaaagacatgccgggtctagaccctgatgtcgttgaacacagactacct
ttgaagcctgagtgtcctccgattgatgcaggtttcctagtcacatcagagtatcctcaa
tggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgat
tatcgggacttgaacaaggctagtccgaaggataattttcctttacctcacattgatgta
ttggttgataatactgctaagtgcaaggttttctccttcatggacggtttctccggctac
aatcagatcaggatggctcctgaggatagagaaaagacgtctttcatcacgccctggggt
gctttctgctatgtggtgatgccatttggtttgataaatgctggtgccacttaccaaagg
ggctttatcgtcagtcaaaagggtattgaagttgatcccgacaaggtcagagccatcaga
gaaatgcctgttccaaagacagagaagcaagtcagaggttttcttggtagactcaattat
atctccagatttatctctcacatgactgccacatgtggaccaattttcaagttactccgc
aaggatcaaggggtggagtggaatgatgattgtcagaaggcttttgatcaaatcaaagaa
tatctgttagaacctccaattcttgttcctccagttgacggaagacctttgatcatgtat
ttaactgtactggaagattccatgggctgtgttttgggtcaacaagatgaaaccggaaag
aaagagcacgctatctactatttgagtaagaagttcactgattgtgagtcccgatattct
gtacttgagaaaacttgttgtgctttaacttgggctgccaagcgtctccgtcattatatg
attaatcatacaacttggttgatatccaagatggatcctatcaagtacatatttgagaag
ccagctttaactggaaggattgctcgctggcagatgttattgtccgagtatgatatcgag
tatcgcactcagaaagcagtcaaaggtagcatcttggcagaacatttggctcatcaacca
atcgaagactatcaatcaatcaaattcgacttcccagatgaagaggttatgtatctaaaa
gcaaaagattgtgacgaaccagtgttcggtgaaggtcctgatcctgaatccgaatggggt
ttgatatttgatggagctgttaatgtctatggaagtggaattggtgcggtcctcattacc
cctaagggtactcacatcccttttactgcgaggttacgttttgattgcacaaacaacatc
gcagagtacgaagcttgcatcatgggtatcgaggaagccatcgatttgaggatcaagaaa
attgtcatttatggagattccgctcttgtgattaaccagatcaaaggagaatgggaaact
cgccatcctggtttgattccctacagagattatgcgagacgattgctgactttcttcaac
aaagtagagttacatcatgtgccccgcgatgagaatcaaatggcagatgctttagctact
ctatcctcaatgatcaatgtgaatggtcacaatactgtgccagtaatcaatgtccaattt
ctcgaccgacctgcttatgtgtttgtagctgaagcaattgatgatgacaagccatggtat
catgatatccaagttttccttcaaactcaaaagtacccacctggggcatccaacaaggac
aagaaaacattgagaagattgtcaagccgtttcttccttaacgaagacgttttgtataaa
aggaactttgatggggtcctacttagatgtgtggataagcatgaagcagaaaaattgatg
tgcgagattcatgaaggctctttcggaactcactcatgtgggcacgccatggcgaagaag
atattgagagctgggtactactggataacaatgcacgctgattgctacaatcatgccaag
agatgccacaaatgtcaaatctatgctgacaagattcatataccaccatctatgctcaat
gtcatctcttccccgtggcccttctctatgtggggcattgacatgattggtcggattgaa
ccaaaggcttccaatgggcatcgcttcatattagtggctatcgattatttcaccaaaatc
atcacagacaatggcacaaatctgaataacaacatgatgaaagagttgtgcgatgacttc
aagattcaacatcacaattcttctccttacagaccacagatgaatggggcagttgaagct
gcaaacaagaacatcaagaagatcatacagaagatggtagttacttataaggactggcat
gaaatgttaccctacgctttgtatggataccgtacctcagtgcgaacctcgacaggggca
acccctttctctttggtatatggtatggaggctgtactacctgtagaggttgagattcct
tctttaagagtcttgatggaagctgaattgtctgaagctgaatggtgccagagcaggcag
tggcggagccaggaaatttatggagcctgggcgaaaaattaa
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integrated database retrieval system
