Medicago truncatula (barrel medic): 112420185
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Entry
112420185 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112420185
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
Retrotrans_gag
Asp_protease_2
gag-asp_proteas
PPR_2
PPR_1
Ty3_capsid
DUF5712
PPR_long
Motif
Other DBs
NCBI-GeneID:
112420185
NCBI-ProteinID:
XP_024634634
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All DBs
Position
3:complement(27444189..27449047)
Genome browser
AA seq
1474 aa
AA seq
DB search
MLAAEQENAQLREELVNLKGEMERMALMMETMMAEREQAAISNSAPVVVVTAAPEGPPQP
SPTTTTTIGLTQPLITDFSSGNMATMGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATN
GVFGPGATEMPFAQGQQTSAHFQMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYISKMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSDLFYETLSPCYSEKMIV
CASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGVSSSGNKKFGNGYPKRNAQEVGMV
AHGGPQPVYPNHLFVANITPQMTAPQNPNYQPPRPQGPSLYYPPLYQQPYNPQQLSQPPY
HPQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQ
TIPPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVA
QNNPLPTHGPAVNMIQDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICSMD
PRGCIQVQNDVQGLLNRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVI
CVPRPTPTTAQKAVPYKYEGTILEPGSETTSPVAVDNIAENSRILRSGRIFPTVGPKSVS
VPVDEPVKERNAGKGKAGEQAKEFDFEDADEVLKLIKKSEYRVVDQLLQTPAKISIMALL
SSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTVCNSLTFSDEDLPAEGNKHNQALF
ISVLCRTDSLSNVLIDTGSALNVMPKSTFDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEV
DLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSG
ESAFLISNLSAFSVIGGSSSDGPSFQGFSAEESVGKIETCMASLKDARRVIQEGKTEGWG
QLVELPENKRKEGIGFLNSKPGMFDPTRGSFHSAGFIHDSPETNAILDDVSGGVTPVFVT
PGGACCNWIAVDIPSVTPRSKLNISESVEHSDPMLSPNFEVPVYEAVAEEDEEIPNEIKW
MLEQERKTIQPHQEEIEIINLGTEEDKKEIKIGASLDVSVKKRVIELIREYVDIFAWSYK
DMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWL
ANIVPVPKKDGKVRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQ
IRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTGLFDGALAMVSKMKASGCI
PDAKTFEIIIHSLFDKGEYDKAKKLREMIVRGLL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacgctcagctcagagaggaactggttaacctcaagggg
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcagca
atctccaattcagctcctgttgtggttgtcacagctgcacctgagggtcccccgcaacca
tctccgactactactacaactatcggcctcacccagcctctgataactgatttttcttct
ggtaatatggcaactatgggcaactcaggcttccgtcctcttggcccccagggtcccttt
gctactcctcaatattccatgccttcaggctacccttggggcatgccgattgcaactaac
ggggtttttggtccaggcgctactgaaatgcctttcgcacagggtcaacagacttcggca
catttccagatgagtcaaccgattcctcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagagcagatttatcactctgacagtataatgggggatgat
aaagcaatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
ggaaaggaaacagtcgtccaaagcatatatgacctttgcttggtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaagtatcaaggggacacgtgtccacaaaat
catctaactatgtatattagcaagatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcacatacctggttcatgggattgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ctggcgccaagtcgcaaggagttgcagtccttaacccagaaagataaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagg
gaactttcagatttgttctatgaaaccctgagcccttgttattcagaaaagatgattgtc
tgtgcatcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggct
cgtaagggagcagctgtttcgggaagttcttcaggtggttcttcaggagtttcgtccagt
ggtaataagaaatttgggaatggttacccaaagaggaatgctcaagaggttggcatggtg
gctcatggaggacctcagcccgtgtaccctaatcacctctttgttgccaatatcacccca
caaatgaccgcaccccagaacccaaactatcaaccaccaagacctcaagggccttcatta
tactatcccccactatatcaacaaccatataacccacaacaactctctcaaccaccctac
catcctcaacaaccctactatcctcaacaaccataccaacaaaggccatataacccccca
caacaacaaccccgtcctcaagctccctacaaccagcaaaatcaaaaacaacaatttgac
cccttgccaatgacctatggagcattgctcccttctttacttgcacagaatctggtccaa
acaataccacctcctcgcattccggaccctctcccacgctggtaccgtccggaccttcat
tgtatttaccatcaaggggcaccaggccacgatgtggagcgttgttttgctcttaagaaa
gaggttcagaaactgataaatagtaaagagttaaccttcaccgaccctgatgctgtagct
cagaacaatcctctgcctactcatgggcctgctgttaatatgattcaagacgatcaggaa
gaggctcgcattctctctgtaggtgatatcaagactcctctggtaccgatacatgtgaaa
atgtgtaaagcaactctcttcaaccacaatcatgaagcttgtgacatatgttcgatggat
cctcgtggatgtatacaagtccagaatgatgtgcagggtctcctaaatagaagagaactt
gtggttacaagggaacccgagagcaaggacgtctgcgttgtcactccggtattcagagcc
aggaggccgctggtgataaaccctaacagtacaaagcccgttggtactcccttggtaatc
tgtgtgcctaggcccacgcctactactgctcagaaagctgtaccctacaagtatgaaggc
acgattctagagcccggaagtgagacaacttcacctgttgctgtggataatatcgcagag
aatagccggattttgaggagtggccgcatctttcctacggtgggtccgaagagtgttagt
gttccggtcgatgagccagtaaaagagcgaaacgccggtaaaggtaaagctggggagcag
gccaaagagtttgactttgaggatgccgatgaagtcttgaagctgatcaagaagagtgaa
tacagggtggtggaccagctgttacaaactcctgcgaagatttccatcatggccctgtta
tcaagttctggtgctcatcgggatgccctgaggaaagtactagaccaggcatttgtggat
tatgatgtaactctgggtcaattcgaaagcattgtggggaatgtgaccgtatgtaacagt
ctgactttcagtgatgaagatctcccggcggaggggaataagcataatcaagcattattc
atctctgtactttgcagaacggactcgttatccaacgtcctgatagataccggctctgca
cttaatgtgatgcccaagtcaactttcgaccaattggcatactccgaggctcctttgaga
cttagcaaggtgacggtaagggccttcgatggaactaggagatcggtgtatggtgaggta
gatttaccaatttcggtcggcccacatgaatttcaggttactttccaagtcatggaaatc
caggcttctttcagctgtttgctcggcagaccatggattcatgacgctggggctgtgaca
tctactctccatcagaaattgaagtttgtaagtcgtggaaagttgatcactgtgagtggc
gaatcggcctttttaatcagcaatttgtctgctttctctgttatcggtggtagtagttcg
gacgggccatcattccaagggttctctgccgaagaaagtgtcggtaagattgagacttgt
atggcttcgttgaaggatgcccggagagtaattcaggaaggcaaaaccgaaggctggggt
cagctagtggagttgccagaaaacaagcgtaaggagggaattggtttccttaacagtaag
cctgggatgttcgaccctaccagaggttctttccacagtgctggtttcattcatgattcg
ccagagaccaatgcaattttagatgatgtatctggaggagtgacaccggtctttgtgacg
cctggaggagcttgctgcaactggattgctgttgacattccttctgtgacaccccgctct
aaactgaacataagtgaatccgttgaacacagtgaccccatgctttctcccaactttgag
gtcccggtttacgaggctgtggcagaggaggatgaggagatcccgaatgagatcaaatgg
atgttggaacaagaaaggaagacaattcaacctcatcaggaggagatagaaatcatcaat
ctgggtactgaggaagacaagaaagaaatcaagattggggcatcgttggatgtatctgtc
aagaaaagagtaattgagcttatcagagaatatgttgatatattcgcatggtcatacaaa
gacatgccgggtctagaccctgatgtcgttgaacacagactaccgttgaagcctgagtgt
cctccggtaaaacagaaattgagaagatctcatcctgatatggccctcaagatcaaagag
gaagtgcgaaagcaaattgatgcaggtttcctagtcacatcagagtatcctcaatggttg
gccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcgg
gacttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgtattggtt
gataacactgctaagtgcaaggttttctccttcatggacggtttctccggctacaatcag
atcaggatggctcctgaggatagagaaaagacgtctttcatcacgccctggggtgctttc
tgttatgtggtgatgccatttggtttgataaatgctggtgccacttaccagaggggtatg
acaggcttgtttgatggtgcattggccatggtatcaaaaatgaaagccagtggttgcatt
ccagatgctaaaacttttgaaataattatccattctttgtttgataaaggtgaatatgat
aaggcaaagaaacttcgtgaaatgattgtaagaggtctactataa
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