Medicago truncatula (barrel medic): 112420765
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Entry
112420765 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112420765
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_3
RVT_1
Retrotrans_gag
zf-CCHC
Integrase_H2C2
RNase_H
Asp_protease_2
gag-asp_proteas
Ty3_capsid
rve
rve_3
DUF5712
Motif
Other DBs
NCBI-GeneID:
112420765
NCBI-ProteinID:
XP_039688551
LinkDB
All DBs
Position
4:11432193..11446557
Genome browser
AA seq
2242 aa
AA seq
DB search
MLAAEQENAQLREELVNLKGEMERMALMMETMMAEREQAAISNSTPVMVVTAAPEGPPQP
SPTTTTTIGLTQPLMTDFSSGNMATMGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATN
GGFGPGATEMPFAQGQQTSAHFQMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYISKMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIV
CASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGVSSSGNKKFGTGYPKRNAQEVSMV
AHGGPQPVYPNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQFPQQPY
YPQQPYQQRPQQQPRPQAPYNQQNQRQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDP
LPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVAQNNPLPTHGP
AVNMIQDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICLMDPRGCIQVQND
VQGLLNRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVICVPRPTPTTA
QKAVPYKYEGTILEPGSETTSPVAVDNIAENSRILRSGRIFPTVGPKSVSVPVDEPVKER
NAGKGKAGEQAKEFDFEDADEVLKLIKKSEYRVVDQLLQTPAKISIMALLSSSGAHRDAL
RKVLDQAFVDYDVTLGQFESIVGNVTACNSLTFSDEDLPVEGNKHNQALLISVLCRTDSL
SNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEVDLPISVGPHE
FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSGESAFLISNLS
AFSVIGGSSSDGPSFQGFSAEESVGKIETCMASLKDARRVIQEGKTEGWGQLVELPENKR
KEGIGFLNSKPGMFDPTRDDAPGGVTPVFVTPGGACCNWIAVDIPSVTPRSKLNISESVE
HSDPMLSPNFEVPVYEAVAEEDEEIPNEIKWTLEQERKTIQPHQEEIEIINLGTEEDKKE
IKIGALLDVSVKKRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPECPPVRKQIDA
GFLVTSEYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKV
FSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGFIVSQKGIE
VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD
CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETGKKEHAIYYLSK
KFTDCESRYSVLEKTCCALTWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARW
QMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDEEVMYLKAKDCDEPVFG
EGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIAEYEACIMGI
EEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARCLLTFFNKVELHHVPRD
ENQMADALATLSSMINVNGHNTVPVINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQ
KYPPGASNKDKKTLRRLSSRFFLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGT
HSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSM
WGIDMIGRIEPKASNGHRFILVAIDYFTKIITDNGTNLNNNMMKEFCDDFKIQHHNSSPY
RPQMNGAVEAANKNIKKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGME
VVLPVEIEIPSLRVLMEAELSEAEWCQSRISEMDGRNDAAALEAVAQTVGQQPNAAGNDG
CSEVQKVQFGTHMLAEEADDWWGDMSVTKYAAKFVKLAKFYPHYSAETAEFSKCIKFEND
LRVDIKRAIGYSKIRNFSDLKGHTLAECKRGDIVCYTCNEEGHISSQCTQPKKVRTGGKV
FALTGMQTTSEDRLIRVGSGCI
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacgctcagctcagagaggaactggttaacctcaaaggg
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcagca
atctccaattcaactcctgttatggtcgtcacagctgcacctgagggtcccccgcaacca
tctccgactactactacaactatcggtctcacccagcctctgatgactgatttttcttct
ggtaatatggcaactatgggcaactcaggcttccgtcctcttggcccccagggtcccttt
gctactcctcagtattccatgccttcaggctacccttggggcatgccgattgcaaccaac
gggggttttggtccaggcgctactgaaatgcctttcgcacagggtcaacagacatcggca
catttccagatgagtcaaccgattcctcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagaacagatttatcactccgacagtataatgggggatgac
aaagcaatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
ggaaaggaaacggtcgtccaaagcatatatgacctttgcttggtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaagtatcaaggggacacatgtccacaaaat
catctaactatgtatattagcaagatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcacatacttggttcatggggttgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ctggcgccaagtcgcaaggagttgcagtccttaacccagaaagataaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagg
gaactttcagaattgttctatgaaaccctgagcccttgttattcagaaaagatgattgtc
tgtgcatcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggct
cgtaagggagcagctgtttcgggaagttcttcaggtggttcttcaggagtttcgtccagt
ggtaataagaaatttggaactggttacccaaagaggaatgctcaagaggttagcatggtg
gctcatggaggacctcagcccgtgtaccctaatcacccctttgttgccaacatcacccca
caaatgaccgcaccccagaacccaaactatcaatcacccagacctcaaggacctgcacca
tactaccccccattataccaaccactatacaacctacaacaattccctcaacaaccatat
tacccccaacaaccataccaacaaagaccacagcaacaaccccgtcctcaggctccttac
aatcagcagaatcaaaggcaacaatttgaccccttgccaatgacctatggagcattgctc
ccttctttacttgcacagaatctggtccaaacaataccacctcctcgcattccggaccct
ctcccacgctggtaccgtccggaccttcattgtatttaccatcaaggggcaccaggccac
gatgtggagcgttgttttgctcttaagaaagaggttcagaaactgataaatagtaaagag
ttaaccttcaccgatcctgatgctgtagctcagaacaatcctctgcctactcatgggcct
gctgttaatatgattcaagacgatcaggaagaggctcgcattctctctgtaggtgatatc
aagactcctctggtaccgatacatgtgaaaatgtgtaaagcaactctcttcaaccacaat
catgaagcttgtgacatatgtttgatggatcctcgtggatgtatacaagtccagaatgat
gtgcagggtctcctaaatagaagggaacttgtggttacaagggaacccgagagcaaggac
gtctgtgttgtcactccggtattcagagccaggaggccgctggtgataaaccctaacagt
acaaagcccgttggtactcccttggtaatttgtgtgcctaggcccacgcctactactgct
cagaaagctgtaccctataagtatgaaggcacgattcttgagcctggaagtgagacaact
tcacctgttgctgtggataatatcgcagagaatagccggattttgaggagtggccgcatc
tttcctacggtgggtccgaagagtgttagtgttccggtcgatgagccagtaaaagagcga
aacgccggtaaaggtaaagctggggagcaggccaaagagtttgactttgaggatgccgat
gaagtcttgaagctgatcaagaagagtgaatacagggtggtggaccagctgttacaaacg
cctgcgaagatttccatcatggccctgttatcaagttctggtgctcatcgggatgccctg
aggaaagtactagaccaggcatttgtagattatgatgtaactctgggtcaattcgaaagc
attgtggggaatgtgaccgcgtgtaacagtctgactttcagtgatgaagatctcccggtg
gaggggaataagcataatcaagcattactcatctctgtactttgcagaacagactcgtta
tccaacgtcttgatagataccggctctgcacttaatgtgatgcccaagtcaactctcgac
caattggcgtactccgaggctcctttgagacttagcaaggtgacagtaagggccttcgat
ggaactaggagatcggtgtatggtgaggtagatttgccaatttcggtcggcccacatgaa
tttcaggttactttccaagtcatggaaatccaggcttctttcagctgtttgctcggcaga
ccatggattcatgacgctggggctgtgacatctactctccatcagaaattgaagtttgta
agtcgtggaaagttgatcactgtgagtggcgagtcggcctttttaatcagcaatttgtct
gctttctctgttatcggtggtagtagttcggacgggccatcattccaagggttctctgcc
gaagaaagtgtcggtaaaattgagacttgtatggcctcgttgaaggatgcccggagagta
attcaggaaggcaaaaccgaaggctggggtcagctagtggagttgccagaaaacaagcgt
aaagagggaatcggtttccttaacagtaagcctgggatgttcgaccctaccagagatgat
gcacctggaggagtgacaccggtctttgtgacgcctggaggagcttgctgcaactggatt
gctgttgacattccttctgtgacaccccgctctaaactgaacataagtgaatccgttgaa
cacagtgaccccatgctttctcccaactttgaggtcccggtttacgaggctgtggcagag
gaggatgaggagatcccgaatgagatcaaatggacgttggaacaagaaaggaagacaatt
caacctcatcaggaggagatagaaatcatcaatctgggtactgaggaagacaagaaagaa
atcaagattggggcattgttggatgtatctgtcaagaaaagagtaattgagcttatcaga
gaatatgttgatatattcgcatggtcatacaaagacatgccgggtctagaccctgatgtc
gttgaacacagactacctttgaagcctgagtgtcctccggtgcgaaagcagattgatgca
ggtttcctagtcacatcagagtatcctcaatggttagccaacatagtgcctgttccaaaa
aaagatggcaaagtcagaatgtgtgttgattatcgggacttgaacaaggctagtccgaag
gataattttcctttgcctcacattgatgtattggttgataacactgctaagtgcaaggtt
ttctccttcatggacggtttctccggctacaatcagatcaggatggctcctgaggataga
gaaaagacgtctttcatcacgccctggggtgctttctgctatgtggtgatgccatttggt
ttgataaatgctggtgccacttaccagaggggctttatcgtcagtcaaaagggtattgaa
gttgatcccgacaaggtcagagccatcagagaaatgcctgttccaaagacagagaagcaa
gtcagaggttttcttggtagactcaattatatctccagatttatctctcacatgaccgcc
acatgtggaccaattttcaagttactccgcaaggatcaaggagtgaagtggaatgatgat
tgtcagaaggcttttgatcaaatcaaagaatatctgttagaacctccaattcttgttcct
ccagttgacggaagacctttgatcatgtatttaacagtactagaagattccatgggctgt
gttttgggtcaacaagacgaaaccggaaagaaagagcacgctatctactatttgagtaag
aagttcactgattgtgagtcccgatattctgtacttgagaaaacttgttgtgctttaact
tgggctgccaagcgtctccgtcattatatgattaatcatacaacttggttgatatccaag
atggatcctatcaagtacatatttgagaagccagctttaactggaaggattgctcgctgg
cagatgttattgtccgagtatgatatcgagtatcgcactcagaaagcagtcaaaggtagc
atcttggcagaacatttggctcatcaaccaatcgaagactatcaaccaatcaaattcgac
ttcccagatgaagaggttatgtatctaaaagcaaaagattgtgacgaaccagtgttcggt
gaaggtcctgatcctgaatccgaatggggtttgatatttgatggagctgttaatgtctat
ggaagtggaattggtgcggtgctcattacccctaagggtactcacatcccttttactgcg
aggttacgttttgattgcacaaacaacatcgcagagtacgaagcttgcatcatgggtatc
gaggaagccatcgatttgaggatcaagaaaattgtcatttatggagattccgctcttgtg
attaaccagatcaaaggagaatgggaaactcgtcatcctggattgattccctacagagat
tatgcaaggtgtttgctgactttcttcaacaaagtagagttacatcatgtgccccgcgat
gagaatcaaatggcagatgctttagctactctatcctcaatgatcaatgtgaatggtcac
aatactgtgccagtaatcaatgtccaatttctcgaccgacctgcttatgtgtttgtagct
gaagcaattgatgatgacaagccatggtatcatgatatccaagttttccttcaaactcaa
aagtacccacctggggcatccaacaaggacaagaaaacattgagaagattgtcaagccgt
ttcttccttaacgaagacgttttgtataaaaggaactttgatggggtcctacttagatgt
gtggataagcatgaagcagaaaaattgatgtgcgagattcatgaaggctctttcggaact
cactcatgtgggcacgccatggcgaagaagatattgagagctgggtactactggataaca
atgcacgctgattgctacaatcatgccaagagatgccacaaatgtcaaatctatgctgac
aagattcatataccaccatctatgctcaatgtcatctcttccccgtggcccttctctatg
tggggcattgacatgattggtcggattgaaccaaaggcttccaatgggcatcgcttcata
ttagtggctatcgattatttcaccaaaatcatcacagacaatggcacaaatctgaataac
aacatgatgaaagagttttgcgatgacttcaagattcaacatcacaattcttctccttac
agaccacagatgaatggggcagttgaagctgcaaacaagaacatcaagaagatcatacag
aagatggtagttacttataaggactggcatgaaatgttaccctacgctttgtatggatac
cgtacctcagtgcgaacctcgacaggggcaacccctttctctttggtatatggtatggag
gttgtactacctgtagagattgagattccttctttaagagtcttgatggaagctgaattg
tctgaagctgaatggtgccagagcagaatttctgagatggatggtagaaacgatgctgct
gcacttgaggctgttgctcaaactgtaggacaacaaccgaatgctgctggtaatgatggt
tgcagtgaggtacagaaggtgcagtttgggacacacatgttagctgaagaagctgatgac
tggtggggggatatgtctgttaccaaatatgctgctaagtttgtaaagcttgcaaagttc
tatccccattatagtgcggagacagctgagttctccaagtgcatcaagtttgagaatgac
ttgagagttgatatcaagagggctattggttattcgaaaataagaaacttctctgatttg
aaaggacacactttagctgaatgtaagcgtggggatattgtttgctacacttgcaatgag
gaaggtcatatcagttcgcagtgtactcagcctaagaaggttaggacaggtggtaaagtg
ttcgcgttgactggcatgcagactactagtgaggaccgacttatcagagttgggtctggt
tgtatctga
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integrated database retrieval system
