Medicago truncatula (barrel medic): 112421802
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Entry
112421802 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112421802
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_1
RVT_3
Retrotrans_gag
RNase_H
Integrase_H2C2
Asp_protease_2
gag-asp_proteas
Ty3_capsid
rve
rve_3
eIF3h_C
DUF5712
Motif
Other DBs
NCBI-GeneID:
112421802
NCBI-ProteinID:
XP_039690305
LinkDB
All DBs
Position
5:complement(3499164..3510938)
Genome browser
AA seq
2150 aa
AA seq
DB search
MLAAEQENAQLREELVNLKGEMERMALMMETMMAEREQAAISNSAPVVVVTAAPEGPPQP
SPTTTTTIGLTQPLITDFSSGNMATMGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATN
GVFGPGATEMPFAQGQQTSAHFQMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYISKMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSDLFYETLSPCYSEKMIV
CASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGVSSSGNKKFGNGYPKRNAQEVGMV
AHGGPQPVYPNHPFVANITPQMTAPQNPNYQPPRPQGPSLYYPPLYQQPYNPQQLSQPPY
HPQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQ
TIPPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVA
QNNPLPTHGPAVNMIQDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICSMD
PRGCIQVQNDVQGLLNRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVI
CVPRPTPTTAQKAVPYKYEGTILEPGSETTSPVAVDNIAENSRILRSGRIFPTVGPKSVS
VPVDEPVKERNAGKGKAGEQAKEFDFEDADEVLKLIKKSEYRVVDQLLQTPAKISIMALL
SSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTVCNSLTFSDEDLPAEGNKHNQALF
ISVLCRTDSLSNVLIDTGSALNVMPKSTFDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEV
DLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSG
ESAFLISNLSAFSVIGGSSSDGPSFQGFSAEESVGKIETCMASLKDARRVIQEGKTEGWG
QLVELPENKRKEGIGFLNSKPGMFDPTRGSFHSAGFIHDSSETNAILDDAPGGVTPVFVT
PGGACCNWIAVDIPSVTPRSKLNISESVEHSDPMLSPNFEVPVYEAVAEEDEEIPNEIKW
MLEQERKTIQPHQEEIEIINLGTEEDKKEIKIGASLDVSVKKRVIELIREYVDIFAWSYK
DMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWL
ANIVPVPKKDGKVRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQ
IRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMI
VKSGTEEEHVDQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGP
IFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQ
QDETGKKEHAIYYLSKKFTDCESRYSVLEKTCCALTWAAKRLRHYMINHTTWLISKMDPI
KYIFEKPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDE
EVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARIRF
DCTNNIAEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARR
LLTFFNKVELHHVPRDENQMADALATLSSMINVNGHNTVPVINVQFLDRPAYVFVAEAID
DDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSRFFLNEDVLYKRNFDRVLLRCVDKH
EAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHI
PPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKIITDNGTNLNNNMMK
ELCDDFKIQHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKDWHEMLPYALYGYRTSV
RTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSSYISQG
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacgctcagctcagagaggaactggttaacctcaagggg
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcagca
atctccaattcagctcctgttgtggttgtcacagctgcacctgagggtcccccgcaacca
tctccgactactactacaactatcggcctcacccagcctctgataactgatttttcttct
ggtaatatggcaactatgggcaactcaggcttccgtcctcttggcccccagggtcccttt
gctactcctcaatattccatgccttcaggctacccttggggcatgccgattgcaactaac
ggggtttttggtccaggcgctactgaaatgcctttcgcacagggtcaacagacttcggca
catttccagatgagtcaaccgattcctcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagagcagatttatcactctgacagtataatgggggatgat
aaagcaatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
ggaaaggaaacagtcgtccaaagcatatatgacctttgcttggtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaaatatcaaggggacacgtgtccacaaaat
catctaactatgtatattagcaagatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcacatacctggttcatgggattgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ctggcgccaagtcgcaaggagttgcagtccttaacccagaaagataaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagg
gaactttcagatttgttctatgaaaccctgagcccttgttattcagaaaagatgattgtc
tgtgcatcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggct
cgtaagggagcagctgtttcgggaagttcttcaggtggttcttcaggagtttcgtccagt
ggtaataagaaatttgggaatggttacccaaagaggaatgctcaagaggttggcatggtg
gctcatggaggacctcagcccgtgtaccctaatcacccctttgttgccaatatcacccca
caaatgaccgcaccccagaacccaaactatcaaccaccaagacctcaagggccttcatta
tactatcccccactatatcaacaaccatataacccacaacaactctctcaaccaccctac
catcctcaacaaccctactatcctcaacaaccataccaacaaaggccatataacccccca
caacaacaaccccgtcctcaagctccctacaaccagcaaaatcaaaaacaacaatttgac
cccttgccaatgacctatggagcattgctcccttctttacttgcacagaatctggtccaa
acaataccacctcctcgcattccggaccctctcccacgctggtaccgtccggaccttcat
tgtatttaccatcaaggggcaccaggccacgatgtggagcgttgttttgctcttaagaaa
gaggttcagaaactgataaatagtaaagagttaaccttcaccgaccctgatgctgtagct
cagaacaatcctctgcctactcatgggcctgctgttaatatgattcaagacgatcaggaa
gaggctcgcattctctctgtaggtgatatcaagactcctctggtaccgatacatgtgaaa
atgtgtaaagcaactctcttcaaccacaatcatgaagcttgtgacatatgttcgatggat
cctcgtggatgtatacaagtccagaatgatgtgcagggtctcctaaatagaagagaactt
gtggttacaagggaacccgagagcaaggacgtctgcgttgtcactccggtattcagagcc
aggaggccgctggtgataaaccctaacagtacaaagcccgttggtactcccttggtaatc
tgtgtgcctaggcccacgcctactactgctcagaaagctgtaccctacaagtatgaaggc
acgattctagagcccggaagtgagacaacttcacctgttgctgtggataatatcgcagag
aatagccggattttgaggagtggccgcatttttcctacggtgggtccgaagagtgttagt
gttccggtcgatgagccagtaaaagagcgaaacgccggtaaaggtaaagctggggagcag
gccaaagagtttgactttgaggatgccgatgaagtcttgaagctgatcaagaagagtgaa
tacagggtggtggaccagctgttacaaactcctgcgaagatttccatcatggccctgtta
tcaagttctggtgctcatcgggatgccctgaggaaagtactagaccaggcatttgtggat
tatgatgtaactctgggtcaattcgaaagcattgtggggaatgtgaccgtatgtaacagt
ctgactttcagtgatgaagatctcccggcggaggggaataagcataatcaagcattattc
atctctgtactttgcagaacggactcgttatccaacgtcctgatagataccggctctgca
cttaatgtgatgcccaagtcaactttcgaccaattggcatactccgaggctcctttgaga
cttagcaaggtgacggtaagggccttcgatggaactaggagatcggtgtatggtgaggta
gatttaccaatttcggtcggcccacatgaatttcaggttactttccaagtcatggaaatc
caggcttctttcagctgtttgctcggcagaccatggattcatgacgctggggctgtgaca
tctactctccatcagaaattgaagtttgtaagtcgtggaaagttgatcactgtgagtggc
gaatcggcctttttaatcagcaatttgtctgctttctctgttatcggtggtagtagttcg
gacgggccatcattccaagggttctctgccgaagaaagtgtcggtaagattgagacttgt
atggcttcgttgaaggatgcccggagagtaattcaggaaggcaaaaccgaaggctggggt
cagctagtggagttgccagaaaacaagcgtaaggagggaattggtttccttaacagtaag
cctgggatgttcgaccctaccagaggttctttccacagtgctggtttcattcatgattca
tcagagaccaatgcaattttagatgatgcacctggaggagtgacaccggtctttgtgacg
cctggaggagcttgctgcaactggattgctgttgacattccttctgtgacaccccgctct
aaactgaacataagtgaatccgttgaacacagtgaccccatgctttctcccaactttgag
gtcccggtttacgaggctgtggcagaggaggatgaggagatcccgaatgagatcaaatgg
atgttggaacaagaaaggaagacaattcaacctcatcaggaggagatagaaatcatcaat
ctgggtactgaggaagacaagaaagaaatcaagattggggcatcgttggatgtatctgtc
aagaaaagagtaattgagcttatcagagaatatgttgatatattcgcatggtcatacaaa
gacatgccgggtctagaccctgatgtcgttgaacacagactaccgttgaagcctgagtgt
cctccggtaaaacagaaattgagaagatctcatcctgatatggccctcaagatcaaagag
gaagtgcgaaagcaaattgatgcaggtttcctagtcacatcagagtatcctcaatggttg
gccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgttgattatcgg
gacttgaacaaggctagtccgaaggataattttcctttgcctcacattgatgtattggtt
gataacactgctaagtgcaaggttttctccttcatggacggtttctccggctacaatcag
atcaggatggctcctgaggatagagaaaagacgtctttcatcacgccctggggtgctttc
tgttatgtggtgatgccatttggtttgataaatgctggtgccacttaccagaggggtatg
accaaaatctttcatgatatgattcacaaagaaattgaggtctacgtagatgatatgatt
gttaagtctggcacagaagaagaacatgttgatcaaaagggtattgaagttgatcccgac
aaggtcagagccatcagagaaatgcctgttccaaagacagagaagcaagtaagaggtttt
cttggtagactcaactatatctccagatttatctctcacatgaccgccacatgtggacca
attttcaagttactccgcaaggatcaaggggtgaagtggaatgatgattgtcagaaggct
tttgatcaaatcaaagaatatctgttagaacctccaattcttgttcctccagttgacgga
agacctttgatcatgtatttaacagtactagaagattccatgggctgtgttttgggtcaa
caagacgaaaccggaaagaaagagcacgctatctactatttgagtaagaagttcactgat
tgtgagtcccgatattctgtacttgagaaaacttgttgtgctttaacttgggctgccaag
cgtctccgtcattatatgattaatcatacaacttggttgatatccaagatggatcctatc
aagtacatatttgagaagccagctttaactggaaggattgctcgctggcagatgttattg
tccgagtatgatatcgagtatcgcactcagaaagcagtcaaaggtagcatcttggcagaa
catttggctcatcaaccaatcgaagactatcaaccgatcaaatttgacttcccagatgaa
gaggttatgtatctaaaagcaaaagattgtgacgaaccagtgttcggtgaaggtcctgat
cctgaatccgaatggggtttgatatttgatggagccgttaatgtctatggtagtggaatt
ggtgcagttctcattacccctaagggtactcacatcccttttactgcaaggattcgattt
gattgtacaaacaacatcgcagaatatgaagcttgcatcatgggtatcgaagaagccatc
gacttgaggatcaagaaaattgtcatctatggagattcagctctcgtgattaaccagatc
aaaggagaatgggaaactcgccatcctggtttgattccctacagagattatgcgagacga
ttgctgactttcttcaacaaagtagagttacaccatgtgccccgtgatgagaatcaaatg
gcggatgctttagctactctatcctcaatgatcaatgtgaacggtcacaatactgtgcca
gtaatcaatgtccaatttctcgaccgaccagcttatgtgtttgtagctgaagcaattgat
gatgacaagccatggtatcatgatatccaagttttccttcaaactcaaaagtacccacct
ggggcatccaacaaggacaagaaaacattgagaaaattgtcaagccgtttcttccttaac
gaagacgttttgtataaaaggaactttgatagggtcctacttagatgtgtggataagcat
gaagcagaaaaattgatgtgcgagattcatgaaggctctttcggaactcactcatgtggg
cacgccatggcgaagaagatattaagagctgggtactactggataacaatgcacgctgat
tgctacaatcatgccaagagatgccacaaatgtcaaatctatgctgacaagattcatata
ccaccatctatgctcaatgtcatctcgtccccgtggcccttctctatgtggggcattgac
atgattggtcggattgaaccaaaggcttccaatgggcatcgcttcatattagtggctatc
gattatttcaccaaaatcatcacagacaatggcacaaatctgaataacaacatgatgaaa
gagttgtgcgatgacttcaagattcaacatcacaattcttctccttacagaccacagatg
aatggggcagttgaagctgcaaacaagaacatcaagaagatcatacagaagatggtagtt
acttataaggactggcatgaaatgttaccctacgctttgtatggataccgtacctcagtg
cgaacctcgacaggggcaacccctttctctttggtatatggtatggaggctgtactacct
gtagaggttgagatcccttctttaagagtcttgatggaagctgaattgtctgaagctgaa
tggtgccagagcagttatatcagtcaaggatga
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integrated database retrieval system
