KEGG   Medicago truncatula (barrel medic): 112422027
Entry
112422027         CDS       T01716                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112422027
Organism
mtr  Medicago truncatula (barrel medic)
SSDB
Motif
Pfam: RVT_1 RT_RNaseH RT_RNaseH_2 RVT_3 Retrotrans_gag DUF4219 Ty3_capsid RNase_H Integrase_H2C2 Asp_protease_2 Retrotran_gag_2 gag-asp_proteas Gag_p24_C
Other DBs
NCBI-GeneID: 112422027
NCBI-ProteinID: XP_039690577
LinkDB
Position
5:complement(11977301..11996725)
AA seq 2274 aa
MAETQTQAQAQIQAQAQALAQAQTQAQAVTEAQARSQAPPLPPPVRTQAEASSSWTLCAD
TPTQSAPQRSTPWFPPFTAGEIFRPIACEAQMPTHQYTTQVPLPAMRVTPATMTYSAPAI
HTIPQTEEPIFHSGNAEAYEEVSDLREKYDELRRDMKALHEKGKFGKTAYDLCLVPSVQV
PHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTNLDK
TRVQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSPRIE
EKEMTKLFLKTLNHFYYKKMVGSTPKSFAEMVGMGVQLEEGVREGRLVKNTTPASGTKKT
GNHFPRKKEQEVGMVTHGGPQQTYPAYQHIAAITPTSHSFQQTNNHPQIPQYPQIPQYPQ
IPQYPQFPQNPSPQNTQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINP
IPVTYAELLPGLLKKNLVQTRTAPPIPEKLPSWYRLDQTCDFHEGGRGHNIETCYAFKST
VQRLINDGKITFTDSAPNVQTNPLPNHGAATVNMIEDCQKTRPVQNVQHIRTPLVPLHAK
LCKVDLFEHDHDLCEVCLMNSGGCQKVRNDIQGLLDRGELVVERRCDDVCVITPEGPLEV
FYDSRKPTITPLVICLPGPLPYASEKAIPYKYNANMIEEGREVPIPSLSSVDNIVEDSRV
LRNGRVVPIVFPKRIDATVNKEVRTKDAGIAKEVDQPKEAGTSAEFDEILKLIKKSEYRV
VDQLMQTPSKISIMSLLLNSEAHKDALMKVLEQAFVDYDVTVGQFGGIVGNITACNNLSF
SDEELPAEGRNHNRALHISVNCKTDALSKVLVDTGSSLNVLSKTTYTQLAYQDAPLRRSG
VMVKAFDGSRKDVLGEVVLPITVGPQVFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTL
HQKLKFVKNGKLVTVNGEEALLVSHLSSFSFIGADDVEGTPFQGFTIEDKNTKRNEASIS
SLKDAQKVIQAGGSTSWGKLIELPENKHREGLGFFPSTSLSTAKKGTFHSSGFIHAIIED
DPESVPRGLITPGVSSHNWVAVDVPFVAHLLEIDEPVEQHNPMISPNFEFPVYEAEEEES
EEIPDEISRLLEQEGKTIQPYGDELEVINLGTKEDKKEIKVGASLETSVKKQVIELLKEY
VDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFL
ITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDNTAKSKVFSF
MDGFSGYXKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEIE
VYVDDMIVKSITEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV
DPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTEDC
QKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVLGQQDETGRKEHAIYYLSKK
FTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGRIARWQ
MLLSEYDIEYRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDEPLFGE
GPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIE
EAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDE
NQMADALATLSSMIKVNHHNDVPLISVKFLDRPAYVFAAEAVFDDKPWFHDIKVFLQTRE
YPPGASNKDKKTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIH
PNGHTMAKKILRAGYYWMTMESDCHKHTRKCHKWATPFSLVYGMEAVLPVEVEIPSLRVL
MEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDLVLK
KIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDDFEKSSRSMMKSTGVASGGIVH
QALTKDNYERWKGVMQNYLQGQGLWDNVIENFDDNNTDFQASKKMNNTDFQASKKMKDGK
AFHIFQLSLGRELHETVKKSNGNHFNNQNGESKATPDLEQGLLGVVQSVSEVETEASRNT
KDAKALHIIQLACGREIVDEISHFKTAKNAWNHLKLQYGKELKAKPDTEQGMCL
NT seq 6825 nt   +upstreamnt  +downstreamnt
atggcagaaactcagactcaagctcaagcacagattcaagcacaagcgcaagcattggca
caagcgcaaactcaagctcaggccgtaacagaagcgcaggcccgatcacaagcacctcca
cttcctccccctgtcagaactcaggccgaggcatcttcttcttggacactatgtgctgac
actccaacgcagtccgctccgcaacgttccacgccttggtttccacctttcactgctggg
gagatatttcgtcctatcgcttgtgaagctcagatgcccactcaccagtacacgactcaa
gtacccctacctgccatgagggtcactccagccaccatgacctactcagcacccgcgata
catacaattccgcaaactgaagagcctatctttcattcagggaatgcagaggcttacgag
gaagtaagcgacctacgagagaagtatgatgaactacgccgagacatgaaagctctccat
gaaaaagggaaattcgggaagactgcgtacgatctctgtttggtaccaagtgtgcaggta
cctcacaaattcaagattccagatttcgagaaatacaaagggagttcttgtcctgaggaa
catctaaaaatgtatgtgagaaggatgcctgcgtatgcccaagatgatcagattcttatt
tactacttccaagaaagcttgaccggccctgcttcaaagtggtacacaaacctagacaaa
acaagggttcaaactttccgtgacctttgtgaagcttttgtggaacagtacagctacaat
gtagacatgactccggaccgaagtgacctccaagccatgactcagggggataaagagacg
ttcaaagagtacgcccaacggtggagagacaccgctgcccaagtcagcccacgaattgag
gagaaagagatgaccaagctcttcctaaaaactttgaatcatttttattacaaaaagatg
gtcgggagtacaccaaagagcttcgcggagatggttggtatgggagtacagttagaagaa
ggagtccgagaaggacgcttagtaaagaatacaactcctgccagtgggaccaagaagacc
gggaaccatttcccgaggaagaaagaacaagaagtcggtatggtgacacatggagggcct
caacaaacttatccagcctatcaacacattgctgccatcacacccacctctcactctttt
caacaaacaaataaccatcctcaaataccacaatatcctcaaataccacaataccctcaa
ataccacaatatcctcaattcccacaaaatccttcaccacaaaatactcaacaacaaaat
ttccaacaacaaccataccaacaatacccataccaacaataccctcaacaaaatttccaa
caacaaccttatcaacaacgcccacaacaacctcgaccaccaagaatgccgattaaccca
ataccagtcacctatgcagaattacttcccggcttactcaagaaaaaccttgtccaaact
agaacagctcctcctatcccagaaaaactaccatcttggtatagacttgaccaaacttgt
gacttccatgaagggggccgtggccataacattgaaacttgttatgcctttaaaagcaca
gtacagaggttgatcaatgatggaaaaataactttcacagactcggcgccaaatgttcaa
acaaatccattgccaaatcatggtgccgcaacagtcaacatgatcgaagattgtcaaaag
actcgtcccgttcagaatgttcaacatatcagaacacccttggttccgttacatgccaaa
ttatgcaaagtcgacctttttgagcatgatcatgatctctgtgaagtatgcctcatgaac
tccggaggatgccagaaagtaagaaatgatattcaagggcttctagaccgaggagagctt
gtggtcgaaaggaggtgtgatgacgtgtgtgtaataactcctgaagggcctttggaggta
ttttatgacagtcgaaagccaactatcacccctctggtgatctgcttaccgggtccactg
ccatatgcttctgaaaaagccattccatacaaatacaatgccaacatgattgaagagggt
cgtgaggttccaataccgtctttgtctagtgtggataatattgttgaagacagtagagtt
ctgagaaatgggcgcgttgttcccatagtgttcccaaagaggattgatgctacagtaaac
aaggaggttcggactaaagatgctggtatcgccaaagaagtggatcaacccaaagaggct
ggtacaagtgcagagtttgacgagattctcaagttaataaagaagagcgagtacagggtt
gttgaccaactgatgcagactccatccaaaatatccataatgtctttattactaaattct
gaggcccataaagatgcattaatgaaggtcttagaacaagcttttgtggattatgatgta
acggtgggtcagtttggcggaatagtagggaacatcactgcatgcaacaacttgagtttc
agtgatgaagagctcccagcagaaggaaggaaccataatcgggcgctgcatatatctgtg
aactgtaaaactgatgctttgtcaaaagtgctggtggatactggatcatctttgaatgtg
ttgtccaaaacaacttatacccaactcgcttaccaagacgcacctttgagacgaagtggg
gtaatggtgaaagcttttgatggctcgaggaaggatgtccttggagaggtggttctaccc
atcacagttgggccacaagttttccaagttaattttcaagtcatggacattcaagcttcg
tatagttgcctactgggtcgaccctggattcacgaggcaggggctgtcacatccacgctg
catcaaaagctgaagtttgtgaagaatgggaagctagtaactgtaaacggtgaagaggct
ttattggtgagtcatttgtcatctttttctttcattggggcagacgatgtcgaagggaca
ccttttcaagggtttactatagaagataagaataccaagaggaatgaagcctctatctcg
tctctgaaagatgctcagaaggtcatacaagcaggagggtccacaagctggggaaaactg
atagagcttccagaaaacaagcaccgagaaggtttgggtttcttcccatctactagtttg
tccacagcaaagaagggcactttccacagttcgggctttatccatgcaatcattgaagac
gatcctgaaagtgtgccacgaggtcttataacgccaggagtatccagccacaattgggtt
gccgtagatgttccttttgttgctcacttattagaaatcgacgaacccgttgaacaacat
aaccctatgatctctcccaactttgagttccctgtgtatgaagcggaggaagaagagagt
gaagagatccctgacgaaatctctcgactactcgaacaagaggggaagaccattcagcct
tatggggacgaactagaagtgattaacttgggcaccaaagaagacaagaaagaaatcaag
gttggggcatcgctcgaaacaagtgttaaaaagcaagtgatagagctcctcaaagaatat
gttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatattgtggtg
catcacctacctttgaaacctgagtgtccgccagtcaaacaaaagttgagaagaacacgt
cctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgctggtttcctc
atcacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaaagatggt
aaggtcagaatgtgtgttgactaccgtgatttaaacaaagctagcccgaaagacgacttt
cctttacctcatattgacgtgttggttgacaatactgcaaagtctaaagtcttctcattc
atggatggattctccggttatnnaaagatggcacccgaagatagagagaaaacatcattt
atcacaccttggggcactttttgttacaaagtaatgccgttcggtttaatcaatgcagga
gctacttatcagaggggtatgactactcttttccacgatatgatacataaagagattgag
gtctatgtggatgatatgatagtcaagtcgattactgaagaagaccatgtcaagtatcta
cagaagatgttccagcgcctgaggaagtacaaacttcgtctaaatcccaacaaatgcact
tttggtgtcagatccggaaagcttctaggcttcattgtcagccagaaaggcatcgaagta
gatcctgacaaagtcaaagccatcagagagatgcctgctccgagaacagaaaaagaagta
aggggttttcttggacgactaaattacatctcccggttcatttctcatatgactgcaact
tgtgggccgatattcaaactactccgcaaagaacaaggtattgtgtggaccgaagattgc
cagaaggcttttgacagcataaagaagtacttgctagaaccaccgattctcatccctcca
gttgaaggaagacctttgatcatgtacctaacagtgttagaaaattccatgggttgtgtg
ctcggacaacaagatgaaaccggaagaaaagagcacgccatttattatttaagcaagaag
tttactgaatgtgaatctcgatactccatgctcgagaagacatgttgtgctctagcctgg
gctgccaaacgcctccgtcattatatgatcaatcacactacttggctggtatctaaaatg
gatccaatcaagtacatatttgagaagcccgctttgacaggaaggattgcacggtggcag
atgctactatctgaatatgatatcgagtaccgttcccagaaggcaattaaaggcagtatt
cttgctgatcacttagctcaccaaccacttgaagactatcgacctatcaagtttgacttt
cctgatgaagagattatgtatctaaagatgaaagattgtgacgagccactattcggagaa
ggtcctgatccagattcagtgtggggtttgatatttgatggggctgtcaatgtatacggc
aacggcataggggcagtactccttactcctaagggtgctcacatccctttcacagcaaga
ctccggtttgactgcacgaacaacatcgctgaatatgaagcctgcatcatgggtattgaa
gaagccattgatctaagaatcaagaacatcgaaatatatggagattcagctcttgtaatc
aaccagatcaaaggaaaatgggaaactcttcacgcaggactaataccttatcgagactat
gcaagacgtttattgaccttcttcaacaaagtggaattacatcatatccctcgggatgag
aatcagatggctgatgccttggctactttgtcttcaatgatcaaggtgaatcatcacaat
gacgtgccactaatcagtgtcaaattccttgatagacccgcttatgtgtttgccgctgaa
gcagttttcgacgataaaccttggtttcatgatattaaggtgtttctccaaactcgagag
tatcctcctggagcatccaacaaagataagaagactctcagaagattatctagtaatttc
ttcctgaatggggatatcttgtacaaaagaaactttgacacggtcttgctcagatgtgta
gacaaatatgaagctgatttattgatacatgaaatacacgaaggatccttcggaattcat
cctaatgggcacacaatggctaaaaagatattgcgagcaggctactactggatgacaatg
gaatcagattgccacaagcataccagaaagtgtcacaagtgggcaactcccttctccctg
gtatatggcatggaggcagtacttcctgtagaagtcgaaattccatcattgagagttcta
atggaggctgacttatcagaagctgaatgggttcagaatagatacgaccagttgaatctg
attgaagaaaagcgcatgacggccctatgtcacggacaattatatcaaaaaaggatgaaa
caggcctttgacaagaaagttcgtccccgtgagtttaaagaaggtgatcttgtgctcaaa
aagattttctctttccaaccagactcccgaggcaagtgggctcctaattatgaaggtccg
tatgttgttaaaagagccttctcaggtggtgccatgactctacaaaccatggacgatttc
gaaaaatcaagtagaagtatgatgaaatcaacaggagtagcctccggtggaatagttcat
caagcactcactaaagacaactacgaaagatggaaaggtgttatgcaaaactatctgcag
ggacaaggtctctgggacaatgtcatcgagaattttgatgataataatactgattttcag
gcttccaagaagatgaataatactgattttcaggcttccaagaagatgaaggatggaaaa
gcttttcatatctttcaactatcacttggacgagagctacatgaaacagtaaaaaaatcc
aacgggaatcacttcaacaaccaaaacggcgagtcaaaagccacccctgatcttgagcaa
ggtcttttgggcgttgtccagagtgtttcagaagttgaaactgaggcttcaaggaataca
aaagatgcgaaagctttgcatatcattcaactagcatgtggacgagagattgtcgacgag
attagtcattttaaaacagccaaaaatgcctggaaccatttaaaattacaatatggcaaa
gagttaaaagccaaaccagatactgaacaaggtatgtgtttatag

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