Medicago truncatula (barrel medic): 112422058
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Entry
112422058 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC112422058
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH
RT_RNaseH_2
RVT_3
Retrotrans_gag
rve
Integrase_H2C2
Ty3_capsid
RNase_H
Asp_protease_2
gag-asp_proteas
Gag_p24_C
CC149
Motif
Other DBs
NCBI-GeneID:
112422058
NCBI-ProteinID:
XP_039684995
LinkDB
All DBs
Position
8:complement(23837792..23845085)
Genome browser
AA seq
2266 aa
AA seq
DB search
MDYLEQENRVLREEMTVMQTRMDEMAELIKTMAETQTQAQAQIQAQAQALAQAQTQAQAV
TEAQARSQAPPPPPPIRTQAEPSSSWTLCADTPTQSAPQRSTPWFPPFTAGEIFRPIACE
AQMPTHQYTAQVPLPAMRVTPATMTYSAPAIHTIPQTEEPIFHSGNAEAYEEVSDLREKY
DELRRDMKALREKGKFGKTAYDLCLVPSVQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRM
PAYAQDDQILIYYFQESLTGPASKWYTNLDKTRVQTFRDLCEAFVEQYSYNVDMTPDRSD
LQAMTQGDKETFKEYAQRWRDTAAQVSPRIEEKEMTKLFLKTLNHFYYKKMVGSTPKSFA
EMVGMGVQLEEGVREGRLVKNTTPASGTKKTGNHFPRKKEQEVGMVTHGRPQQTYPAYQH
IAAITPTSHPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQQPYQQQPYQQFP
YQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLPGLLKKNLVQTRTAPPIPENY
HLVQRLINDGKITFTDSAPNVQTNPLPNHGAATVNMIEDCQKTRPILNVQHIRTPLVPLH
AKLCKVDLFEHDHDLCEICLMNSGGCQKVRNDIQGLLDRGELVVERKCDDVCVITPEGPL
EVFYDSRKSTITPLVICLPGPLPYASEKAIPYKYNATMIEEGREVPIPPLSSVDNIVEDS
RVLRNGRVVPILFPKKIDATINKEVRTKDAGIAKEVDQPNGAGTSAEFDEILKLIKKSEY
KVVDQLMQTPSKISIMSLLLNSEAHKDALMKVLEQAFVDYDVTVGQFGGIVGNITACNNL
SFSDEELPAEGRNHNRALHISVNCKTDALSKVLVDTGSSLNVLSKTTYTQLTYQDAPLRR
SGVMVKAFDGSRKDVLGEVVLPITVGPQVFQVNFQVMDIQASYSCLLGRPWIHEAGAVTS
TLHQKLKFVKNGKLVTVNGEEALLVSHLSSFSFIGADDVEGTPFQGFTIEDKNTKRNEAS
ISSLKDAQKVIQAGGSTSWGKLIELPENKHREGLGFFPSTSLSTAKKGTFHSSGFIHAII
EDDPESVPRGFITPGVSSHNWVAVDVPFVAHLLEIDEPVEQHNPMISPNFEFPVYEAEEE
ENEEIPDEISRLLEQERKTIQPYGDELEVINLGTKEDKKEIKVGTSLETSVKKQVIELLK
EYVDVFAWSYQDMPGLDTDIVVHHLPLKPGCPPVKQKLRRTRPDMALKIKEEVQKQIDAG
FLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHVDVLVDSTAKSKVF
SFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIH
KEIEVYVDDMIVKSITEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQK
GIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVW
TEDCQKAFDSIKKYLLEPPILIPPVEGRPLIIYLTVLENSMGCVLGQQDETGRKEHAIYY
LSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGRI
ARWQMLLSEYDIEYRSQKAIKGSILVDHLAHQPLEDYQPIKFDFPDEEIMYLKMKDCDEP
LFGEGPDPDSVWGLIFDGAVNVNGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACI
MGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHI
PRDENQMADALATLSSMIKVNHHNDVPLISVKFLDRPAYVFAAEAVFDDKPWFHDIKVFL
QTREYPPGASNKDKKTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGS
FGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYTDKIHMPPTTLNLLSSPWP
FSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYG
IPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVVT
YKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRILMEANLSEAEW
VQNRYDQLNLIEEKRMAALCHGQLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSFQPDSR
GKWAPNYEGPYVVKKAFSGGAMTLQTMDGEELPRPVNTDAVKKYFV
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atggattatcttgagcaggaaaatcgggtacttcgtgaagaaatgacagtcatgcagact
aggatggacgagatggctgaattaataaaaacaatggcagaaactcagactcaagctcaa
gcacagattcaagcacaagcgcaagcattggcacaagcgcaaactcaagctcaggccgta
acagaagcgcaggcccgatcacaagcacctccaccccctcctcctatcagaactcaggcc
gagccatcttcttcttggacactatgtgctgacactccaacgcagtccgctccgcaacgt
tccacgccttggtttccacctttcactgctggggagatatttcgtcctatcgcttgtgaa
gctcagatgcccactcaccagtacacggctcaagtacccctacctgccatgagggtcact
ccagccaccatgacctactcagcacctgcgatacatacaattccgcaaactgaagagcct
atctttcattcagggaatgcagaggcttacgaggaagtaagcgatctacgagaaaagtat
gacgaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcg
tacgatctctgtttggtaccgagtgtgcaggtgcctcacaaattcaagatcccagatttc
gagaaatacaaaggaagctcttgtcctgaggaacatctaaaaatgtatgtgagaaggatg
cctgcgtatgcccaagatgatcagattcttatttactacttccaagaaagcttgaccggc
cctgcttcaaaatggtacacaaacctagacaaaacaagggttcaaactttccgtgacctt
tgtgaagcttttgtggaacagtacagttacaatgtagacatgactccggaccgaagcgat
ctccaagccatgactcagggagataaagagacgttcaaagagtacgcccaacggtggaga
gacaccgctgcccaagtcagcccacgaattgaggagaaagagatgaccaagctcttccta
aaaactctgaatcatttttattacaaaaagatggtcgggagtacaccaaagagcttcgcg
gagatggttggtatgggagtacagttagaagaaggagtccgagaaggacgcttagtaaag
aatacaactcctgccagtgggaccaagaagaccgggaatcatttcccgaggaagaaagag
caagaagtcggtatggtgactcatggaaggcctcaacaaacttatccagcctatcaacac
attgctgccatcacacccacctctcacccttttcaacaaacaaataaccatcctcaaata
ccgcaatatcctcaaataccgcaatatcctcaaataccacaatatcctcaattcccacaa
aatccttcaccacaaaatactcaacaaccataccaacaacaaccataccaacaattccca
taccaacaataccctcaacaaaatttccaacaacaaccttatcaacaacgcccacaacaa
ccgcgaccaccaagaatgccgattaacccaataccagtcacctatgcagaattacttccc
ggcttactcaagaaaaaccttgtccaaactagaacagctcctcctatcccagaaaactac
catcttgtgcagaggttgatcaatgatggaaaaataactttcacagactcggcgccaaat
gtccaaacaaacccattgccgaatcatggtgccgcaacagtcaacatgatcgaagattgt
caaaagactcgtcccattctgaatgttcaacatatcagaacacccttggtcccgttacat
gccaagttatgcaaagtcgacctttttgagcatgatcatgatctctgtgaaatatgcctt
atgaactccggaggatgtcagaaagtaagaaatgatattcaagggcttctagaccgagga
gagcttgtggtcgaaaggaagtgtgatgatgtgtgtgtaataactcccgaaggacctttg
gaggtattttatgacagtcgaaagtcaactatcacccctctggtgatctgcttaccgggt
ccactaccatatgcttctgaaaaagccattccatacaaatacaatgccaccatgattgaa
gagggtcgtgaggttccaataccgcctctatctagtgtggataatattgtcgaagacagt
agagttctgagaaatgggcgcgttgttcccatactgttcccaaagaagattgatgctaca
ataaataaggaggttcggactaaagatgctggtatcgccaaagaagtggatcaacccaat
ggggctggtacaagtgcagagtttgatgagattctcaagttaataaagaagagcgagtac
aaggttgttgaccaattgatgcagactccatccaaaatatccataatgtctttattacta
aattctgaggcccataaagatgcattaatgaaggttttagaacaagcttttgtggattat
gatgtaacggtgggtcagtttggcggaatagtagggaacatcactgcatgcaacaacttg
agtttcagtgatgaagagctcccagcagaaggaaggaaccataatcgggcgctgcatata
tctgtgaactgtaaaaccgatgctttgtcaaaagtgctggtggatactggatcatctttg
aatgtgttgtccaaaacaacttatacccaactcacataccaagacgcacctttgagacga
agtggggtaatggtgaaagcttttgatggctcgaggaaggatgtccttggagaggtggtt
ctacccatcacagttgggccacaagttttccaagttaattttcaagtcatggacattcaa
gcttcgtatagctgcctactgggtcgaccctggattcacgaggcaggggctgtcacatcc
acgctgcatcaaaagctgaagtttgtaaagaatgggaagctagtaactgtaaacggtgaa
gaggctttattggtgagtcatttgtcatctttctctttcattggggcagacgatgtcgaa
gggacaccttttcaagggtttactatagaagataagaataccaagaggaatgaagcctct
atctcgtctctgaaagatgctcagaaggtcatacaagcaggagggtctacaagctgggga
aagctgatagagcttccagaaaacaagcaccgagaaggtttgggtttcttcccatctact
agtttgtccacagcaaagaagggcactttccacagttcgggctttatccatgcaatcatt
gaagatgatcctgaaagtgtgccacgaggttttataacgccaggagtatccagccacaat
tgggttgccgtagatgttccttttgttgctcacttattagaaatcgacgaacccgttgaa
caacataaccctatgatctctcccaactttgagttccctgtatatgaggcggaagaagaa
gagaatgaagagatccctgacgaaatctctcgactactcgaacaagagaggaagactatt
cagccttatggggacgaactagaagtgattaacttgggcaccaaagaagacaagaaagaa
atcaaggttgggacatcgctcgaaacaagtgttaaaaagcaagtgatagagctcctcaaa
gagtatgttgatgtgtttgcctggtcctaccaagatatgccgggtctagacactgatatt
gtggtacatcacctacctttaaaacctgggtgtccgccagtcaaacaaaagttgagaaga
acacgtcctgacatggctctcaaaatcaaagaagaggtacagaaacagatcgacgctggt
ttcctcattacatcaaattacccccaatggttagctaacatagtgcctgttccaaagaag
gatggtaaggtcagaatgtgtgttgactaccgtgatttaaacaaagctagcccgaaagac
gactttcctttacctcatgttgacgtgttggttgacagtactgccaagtctaaagtcttc
tcattcatggatggattctccggttataatcaaatcaagatggcacccgaagatagagag
aaaacatcatttattacaccttggggcactttctgttacaaagtaatgccgttcggttta
atcaatgccggagctacttatcagaggggtatgactactcttttccacgatatgatacat
aaagagattgaagtctatgtggatgatatgatagtcaagtcaattactgaagaagaccat
gtcaagtatctacagaagatgttccagcgcctgaggaagtacaaacttcgtctgaatccc
aacaaatgcacttttggtgttagatccggaaagcttctaggtttcattgtcagccagaaa
ggcatcgaagtagatcctgacaaagtcaaagccatcagagagatgcctgctccgagaaca
gaaaaagaagtaaggggttttcttggacgactaaattacatctcccggttcatttctcat
atgactgcaacttgtgggccgatattcaaactactccgcaaagaacaaggtattgtgtgg
accgaagattgccagaaggcttttgacagcataaagaagtacttgctagaaccaccgatt
ctcatccctccagttgaaggaagacctttgatcatatacctaacggtgctagaaaattcc
atgggttgtgtgctcggacaacaagatgaaaccggaagaaaagagcacgccatttattat
ttaagcaagaagtttactgaatgtgaatctcgctactccatgctcgagaagacatgttgt
gctctagcctgggctgccaagcgtctccgtcattatatgattaatcacactacttggctg
gtatctaaaatggatccaatcaagtacatatttgagaagcccgctttgacaggaaggatt
gcacggtggcagatgctactatctgaatatgatatcgagtaccgttcccagaaggcaatt
aaaggcagtattcttgttgatcacttggctcaccaaccgcttgaagactatcagcctatc
aagtttgactttcctgatgaagagattatgtatttaaagatgaaagattgcgacgagcca
ctattcggagaaggtcctgatccagattcagtgtggggtttgatatttgatggggccgtc
aatgtaaacggcaacggcataggggcggtactccttactcctaaaggtgctcacatccct
ttcacagcaagactccggtttgactgcacgaacaacatcgctgaatatgaagcctgcatc
atgggtattgaagaagccattgatctaagaatcaagaacatcgagatatatggagattca
gctcttgtaatcaaccagatcaaaggaaaatgggaaactcttcatgcaggactaatacct
tatcgagactatgcaagacgtttattgaccttcttcaacaaagtggaattacatcatatc
cctcgggatgagaatcagatggctgatgccttggctactttgtcttcaatgatcaaggtg
aatcatcacaatgacgtgccgctaatcagtgtcaaattccttgatagacccgcttatgtg
tttgccgctgaagcagttttcgacgataaaccgtggtttcatgatattaaagtgtttctc
caaactcgagagtatcctcctggagcatccaacaaagataagaagactctcagaagatta
tctagtaatttcttcctgaatggggatatcttgtacaaaagaaactttgacacggtcttg
ctcagatgtgtagacaaatatgaagctgatttattgatacatgaaatacacgaaggatcc
ttcggaattcatcctaatgggcacacaatggctaaaaagatattgcgagcaggctactac
tggatgacaatggagtcagattgctacaagcataccagaaagtgtcacaagtgtcagata
tacaccgacaagattcatatgccgccaactacactcaatttactttcctctccgtggcct
ttctctatgtggggcattgacatgatcggaaggattgagcccaaagcttcaaatggacac
cgttttatcctagtggctattgactacttcactaagtgggttgaggccgcatcgtatgcc
aatgtgaccaaacaagtagtggtcaaatttatcaagaatcatatcatttgtcgttatggc
atccccaaccggatcatcaccgacaacggaacaaatctaaacaacaagatgatgaaagaa
ttgtgtgatgatttcaagatcgagcaccataactcttcaccttacagaccccaaatgaat
ggtgctgtcgaagctgcaaataagaatataaagaggattgtccagaagatggtggtgact
tataaagattggcatgaaatgcttccctttgcattacatggatatcgtacttctgtacgc
acatcaacaggggcaactcccttctccctggtatatggcatggaggcagtacttcctgta
gaagtcgagattccatcattaagaattctaatggaggctaacttatcagaagctgaatgg
gttcaaaatagatacgaccaattgaatctgattgaagaaaagcgcatggcagccctatgt
cacggacagttatatcaaaaaaggatgaaacaggcttttgacaagaaagttcgtccccgt
gagtttaaagaaggtgatctcgtgctcaaaaagattttctctttccaaccagactcccga
ggcaagtgggctcctaattatgaaggaccgtatgttgttaaaaaggccttctcaggtggt
gccatgactctacaaaccatggacggtgaagaacttccacgacctgtgaacacggatgca
gtcaagaagtactttgtctaa
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integrated database retrieval system
