Medicago truncatula (barrel medic): 11405241
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Entry
11405241 CDS
T01716
Name
(RefSeq) serrate RNA effector molecule isoform X1
KO
K27103
serrate RNA effector molecule
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11405241
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
11405241
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
11405241
NCBI-ProteinID:
XP_039684771
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Position
8:16676861..16684284
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AA seq
773 aa
AA seq
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MAEVLTPIPSDSLDQSSPTTTSPPPPPPQPQSPPPTSAPDSDLPLPPPQSSFRRRDYRRD
DRDRDFDRPPPRREYYDRNNISPPRDRDRDFKRRRSPSPPPYRDRRHSPPMRRSPPHYNN
YKRSRRGGSPRGGYGPDDRSEYDNYGGYERGGRGGYDRGGRGGYDRGGRGGNDRGGRGGY
DRGGRGGYGDDRSYGRFGNRSGGGYQNGVSGMLIVANYIGMESNRGYADLPSGGGQREGL
MSYKQFIQELEDDILPTEAERRYQEYKSEYISTQKRAYFSAHKDEEWLKDKYHPTNLLTV
IERRNESARQLAKDFLLDLQSGTLDPNPGLSASLSSKSGQASEPNSEEEAEDQRRRDGWG
SNKKSDFSAAPKAHPVSSEPRRIQADVQQAQALVRKLDTEKRIGDNILCSSDHNKTDDKS
HNGSVGPTVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPER
KGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVLAAKEKMDAAAIEVLDPYVRKIRDEKY
GWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLREDLYTQNYMNDPDAPGGKP
VMQQPQKDNRPLNQRLGFEGRLRDDRGNRRDHERYDRMNGDRANSPSRERQSKALEMGNH
DETMQDTFAGPGVPPFSSDIPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGGPSSFDG
SGINMLSGPHHMGGPAPIITLPPGFRPDPRKMRSYQDLDAPDEEVTVIDYRSL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagttctcacccccattccctccgattccctcgaccaatcctccccaaccacc
acctcccctccaccaccgcctccacaaccacaatcacctcctcccacctccgcccccgat
tccgatctccctctaccacctccacaatcctccttccgccgcagagactaccgccgcgat
gatagagatagagatttcgatcgtcctcctcctcgccgcgagtattatgaccgtaacaac
atatcgcctccgagggatagagatagagatttcaaacgcaggcgtagtcccagtcctcct
ccatatcgtgaccgccgtcattcaccaccaatgcgaaggtcgcccccgcattataataat
tataaacgctccaggagaggtggtagtccccgtggcggttatggacccgatgatagatct
gaatatgataattacggtggttatgaaaggggtggaagaggtggttatgataggggtgga
agaggtggctatgataggggtggacgaggtggtaatgataggggtggaagaggtggctat
gataggggtggaagaggtggttatggtgatgacaggtcttatggtaggtttggaaatcgt
tctggaggaggatatcaaaatggggtctctggtatgttaatagttgctaattacataggt
atggaatccaatcgtggttatgcagacttgccaagtggcggtgggcaaagagaagggttg
atgtcctataaacaattcattcaggagctggaggatgatatactaccaactgaagcagaa
cgtaggtatcaagaatacaaatcagagtatatttctacacaaaaaagagcttatttcagt
gctcataaggatgaggagtggttgaaagataaatatcatccaacaaatttgcttacagtc
attgaaaggaggaatgaaagtgctcgacagctggcaaaggattttttgcttgatttgcaa
agtggaacattagatccaaatccgggtttaagtgcctctttatccagcaaatcagggcaa
gctagcgagccaaattcagaggaggaagcggaagaccaaagaagaagagatgggtggggt
tctaataaaaaaagtgatttctcagctgctccaaaggctcatcctgtcagttctgaacca
agacgaatacaagcagatgttcaacaggctcaggcccttgttcgcaagcttgacacagaa
aagaggattggagataatattttatgcagcagtgatcacaacaaaactgatgacaagtct
cacaatggatctgtgggtcccacagtcattataagaggcctgacatctgttaagggttta
gaaggtgttgagcttttggacacactgattacatatctgtggcggattcatggtgtagat
tattatggcatgattgagactaatgaggctaagggttttaggcatgttaggccagaaaga
aaagggcatgaagaaacaggtaaatcagggtctgaatgggagaagaaacttgactcattt
tggcagggaaggttgaatggtcaggatccattggaagtactggctgctaaggagaaaatg
gatgctgcagcaattgaagtgttggatccatatgttagaaaaatcagggatgaaaagtat
ggatggaagtatggttgtggagctaagggctgcacaaagctttttcatgctgctgaattt
gtgtacaaacatctgaagctaaagcaccctgagcttgctcttgaacaaacttcgaaattg
cgtgaggatctctatactcaaaattacatgaatgatccagatgctcctggtggaaagcct
gtcatgcagcaacctcagaaggacaacaggcctttaaatcaaaggttaggttttgagggc
cgattgagagatgatcgtggtaatcgtcgagaccatgaacggtatgacagaatgaatgga
gatagagctaattccccatcccgtgaaaggcagtctaaagcacttgagatgggaaaccat
gatgaaacaatgcaagacacttttgcagggcctggtgttcctccttttagctcagatatt
cctccaccagtattgatgcctgtacctggtgctgggccattaggaccttttgttcctgct
ccaccagaagttgcaatgcagatgtttagagatcaaggaggaccatcttcatttgatggc
tctggaataaatatgctgtctggcccgcatcatatgggtggaccggcaccaataattact
cttcctccaggttttagaccagatcctcggaagatgcgaagttatcaagatttggatgct
ccagacgaagaggtcaccgtgatagactatcggagtttgtaa
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